Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.05□□□□□ -2.74
NPHP1O15259 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.05□□□□□ -2.74
NPHP1O15259 RNU6-828P-201ENST00000364876 107 ntBASIC-2.06□□□□□ -2.74
NPHP1O15259 MIR581-201ENST00000384895 96 ntBASIC-2.06□□□□□ -2.74
NPHP1O15259 AC103706.3-201ENST00000636297 85 ntBASIC-2.06□□□□□ -2.74
NPHP1O15259 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.07□□□□□ -2.74
NPHP1O15259 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.07□□□□□ -2.74
NPHP1O15259 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.09□□□□□ -2.74
NPHP1O15259 SNORD18C-201ENST00000362704 69 ntBASIC-2.1□□□□□ -2.75
NPHP1O15259 SNORA40B-201ENST00000385573 128 ntBASIC-2.1□□□□□ -2.75
NPHP1O15259 RNU6-940P-201ENST00000363433 104 ntBASIC-2.11□□□□□ -2.75
NPHP1O15259 RNU6-520P-201ENST00000384717 104 ntBASIC-2.11□□□□□ -2.75
NPHP1O15259 RNU7-119P-201ENST00000459279 63 ntBASIC-2.11□□□□□ -2.75
NPHP1O15259 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.12□□□□□ -2.75
NPHP1O15259 MIR4662A-201ENST00000637499 67 ntBASIC-2.12□□□□□ -2.75
NPHP1O15259 RNA5SP405-201ENST00000363059 114 ntBASIC-2.13□□□□□ -2.75
NPHP1O15259 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.13□□□□□ -2.75
NPHP1O15259 MIR4679-1-201ENST00000637619 75 ntBASIC-2.13□□□□□ -2.75
NPHP1O15259 MIR202-201ENST00000362219 110 ntBASIC-2.14□□□□□ -2.75
NPHP1O15259 RNU6-776P-201ENST00000364403 104 ntBASIC-2.14□□□□□ -2.75
NPHP1O15259 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.14□□□□□ -2.75
NPHP1O15259 RNU6-800P-201ENST00000384473 103 ntBASIC-2.14□□□□□ -2.75
NPHP1O15259 SNORA40.16-201ENST00000517238 121 ntBASIC-2.14□□□□□ -2.75
NPHP1O15259 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.15□□□□□ -2.75
NPHP1O15259 MIR548N-201ENST00000408742 75 ntBASIC-2.15□□□□□ -2.75
NPHP1O15259 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.17□□□□□ -2.76
NPHP1O15259 RNU6-118P-201ENST00000516552 102 ntBASIC-2.17□□□□□ -2.76
NPHP1O15259 RNU6-194P-201ENST00000363862 105 ntBASIC-2.18□□□□□ -2.76
NPHP1O15259 SNORD60-201ENST00000383903 83 ntBASIC-2.18□□□□□ -2.76
NPHP1O15259 MIR3938-201ENST00000582157 103 ntBASIC-2.19□□□□□ -2.76
NPHP1O15259 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.2□□□□□ -2.76
NPHP1O15259 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.2□□□□□ -2.76
NPHP1O15259 RNU6-361P-201ENST00000364454 107 ntBASIC-2.2□□□□□ -2.76
NPHP1O15259 AC097484.2-201ENST00000509147 251 ntBASIC-2.2□□□□□ -2.76
NPHP1O15259 Y_RNA.685-201ENST00000516532 108 ntBASIC-2.2□□□□□ -2.76
NPHP1O15259 SNORA17.4-201ENST00000391287 132 ntBASIC-2.21□□□□□ -2.76
NPHP1O15259 MIR4748-201ENST00000578076 82 ntBASIC-2.21□□□□□ -2.76
NPHP1O15259 MIR466-201ENST00000580653 84 ntBASIC-2.21□□□□□ -2.76
NPHP1O15259 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.22□□□□□ -2.76
NPHP1O15259 FTX_4.1-201ENST00000616291 147 ntBASIC-2.23□□□□□ -2.77
NPHP1O15259 AC110620.1-201ENST00000416042 228 ntBASIC-2.24□□□□□ -2.77
NPHP1O15259 RNU6-68P-201ENST00000516576 104 ntBASIC-2.25□□□□□ -2.77
NPHP1O15259 RNU6-530P-201ENST00000391180 107 ntBASIC-2.26□□□□□ -2.77
NPHP1O15259 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.26□□□□□ -2.77
NPHP1O15259 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.26□□□□□ -2.77
NPHP1O15259 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.26□□□□□ -2.77
NPHP1O15259 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.26□□□□□ -2.77
NPHP1O15259 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.26□□□□□ -2.77
NPHP1O15259 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.26□□□□□ -2.77
NPHP1O15259 MIR3139-201ENST00000579145 76 ntBASIC-2.27□□□□□ -2.77
NPHP1O15259 RNY4P27-201ENST00000363341 96 ntBASIC-2.28□□□□□ -2.77
NPHP1O15259 SNORD45.2-201ENST00000363552 72 ntBASIC-2.28□□□□□ -2.77
NPHP1O15259 SNORD113-3-201ENST00000364830 72 ntBASIC-2.29□□□□□ -2.78
NPHP1O15259 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.29□□□□□ -2.78
NPHP1O15259 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.29□□□□□ -2.78
NPHP1O15259 AL451105.1-201ENST00000450005 189 ntBASIC-2.29□□□□□ -2.78
NPHP1O15259 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.3□□□□□ -2.78
NPHP1O15259 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.3□□□□□ -2.78
NPHP1O15259 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.3□□□□□ -2.78
NPHP1O15259 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.3□□□□□ -2.78
NPHP1O15259 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.31□□□□□ -2.78
NPHP1O15259 RNU6-912P-201ENST00000363800 104 ntBASIC-2.32□□□□□ -2.78
NPHP1O15259 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.32□□□□□ -2.78
NPHP1O15259 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.32□□□□□ -2.78
NPHP1O15259 MIR4426-201ENST00000640330 63 ntBASIC-2.32□□□□□ -2.78
NPHP1O15259 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.33□□□□□ -2.78
NPHP1O15259 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.34□□□□□ -2.78
NPHP1O15259 RNU6-471P-201ENST00000383944 106 ntBASIC-2.34□□□□□ -2.78
NPHP1O15259 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.35□□□□□ -2.79
NPHP1O15259 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.35□□□□□ -2.79
NPHP1O15259 AC114801.3-201ENST00000510231 177 ntBASIC-2.35□□□□□ -2.79
NPHP1O15259 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.35□□□□□ -2.79
NPHP1O15259 MIR379-201ENST00000362218 67 ntBASIC-2.36□□□□□ -2.79
NPHP1O15259 MT-TM-201ENST00000387377 68 ntBASIC-2.36□□□□□ -2.79
NPHP1O15259 RNU6-419P-201ENST00000517030 63 ntBASIC-2.36□□□□□ -2.79
NPHP1O15259 RNU6-590P-201ENST00000365039 107 ntBASIC-2.37□□□□□ -2.79
NPHP1O15259 RNU6-141P-201ENST00000410499 105 ntBASIC-2.37□□□□□ -2.79
NPHP1O15259 RNU6-300P-201ENST00000459080 104 ntBASIC-2.38□□□□□ -2.79
NPHP1O15259 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.41□□□□□ -2.8
NPHP1O15259 RNY4P9-201ENST00000363194 97 ntBASIC-2.42□□□□□ -2.8
NPHP1O15259 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.42□□□□□ -2.8
NPHP1O15259 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.42□□□□□ -2.8
NPHP1O15259 RNU6-742P-201ENST00000365289 107 ntBASIC-2.43□□□□□ -2.8
NPHP1O15259 RNU6-176P-201ENST00000517196 105 ntBASIC-2.44□□□□□ -2.8
NPHP1O15259 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.45□□□□□ -2.8
NPHP1O15259 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.46□□□□□ -2.8
NPHP1O15259 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.47□□□□□ -2.8
NPHP1O15259 MIR1254-1-201ENST00000408257 97 ntBASIC-2.48□□□□□ -2.81
NPHP1O15259 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.48□□□□□ -2.81
NPHP1O15259 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.49□□□□□ -2.81
NPHP1O15259 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.51□□□□□ -2.81
NPHP1O15259 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.51□□□□□ -2.81
NPHP1O15259 MIR548X-201ENST00000580069 75 ntBASIC-2.51□□□□□ -2.81
NPHP1O15259 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.51□□□□□ -2.81
NPHP1O15259 RNU6-446P-201ENST00000362827 106 ntBASIC-2.54□□□□□ -2.82
NPHP1O15259 SNORA72.7-201ENST00000516349 94 ntBASIC-2.54□□□□□ -2.82
NPHP1O15259 MIR496-201ENST00000385226 102 ntBASIC-2.56□□□□□ -2.82
NPHP1O15259 RNU6-345P-201ENST00000517001 107 ntBASIC-2.57□□□□□ -2.82
NPHP1O15259 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.58□□□□□ -2.82
NPHP1O15259 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.59□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 276 ms