Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.78□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.79□□□□□ -2.54
SHANK1Q9Y566 RNU6-649P-201ENST00000384463 107 ntBASIC-0.79□□□□□ -2.54
SHANK1Q9Y566 MIR379-201ENST00000362218 67 ntBASIC-0.79□□□□□ -2.54
SHANK1Q9Y566 RNU6-330P-201ENST00000363015 107 ntBASIC-0.79□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.79□□□□□ -2.54
SHANK1Q9Y566 MIR5683-201ENST00000636514 76 ntBASIC-0.79□□□□□ -2.54
SHANK1Q9Y566 RNA5SP215-201ENST00000363440 122 ntBASIC-0.8□□□□□ -2.54
SHANK1Q9Y566 RNU6-380P-201ENST00000410207 107 ntBASIC-0.8□□□□□ -2.54
SHANK1Q9Y566 RNU6-542P-201ENST00000516405 103 ntBASIC-0.8□□□□□ -2.54
SHANK1Q9Y566 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.8□□□□□ -2.54
SHANK1Q9Y566 U2.22-201ENST00000636441 106 ntBASIC-0.8□□□□□ -2.54
SHANK1Q9Y566 RNU6-79P-201ENST00000362511 107 ntBASIC-0.8□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.8□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.8□□□□□ -2.54
SHANK1Q9Y566 FTX_4.1-201ENST00000616291 147 ntBASIC-0.8□□□□□ -2.54
SHANK1Q9Y566 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.8□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.81□□□□□ -2.54
SHANK1Q9Y566 RNU6-787P-201ENST00000384032 107 ntBASIC-0.81□□□□□ -2.54
SHANK1Q9Y566 MIR664A-201ENST00000626086 82 ntBASIC-0.81□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.81□□□□□ -2.54
SHANK1Q9Y566 MIR548C-201ENST00000384815 97 ntBASIC-0.81□□□□□ -2.54
SHANK1Q9Y566 MIR520D-201ENST00000385002 87 ntBASIC-0.81□□□□□ -2.54
SHANK1Q9Y566 SNORD18C-201ENST00000362704 69 ntBASIC-0.82□□□□□ -2.54
SHANK1Q9Y566 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.82□□□□□ -2.54
SHANK1Q9Y566 MIR125B1-201ENST00000385236 88 ntBASIC-0.82□□□□□ -2.54
SHANK1Q9Y566 RNU6-587P-201ENST00000391282 106 ntBASIC-0.82□□□□□ -2.54
SHANK1Q9Y566 RNU4-88P-201ENST00000411220 86 ntBASIC-0.82□□□□□ -2.54
SHANK1Q9Y566 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.82□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.83□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.83□□□□□ -2.54
SHANK1Q9Y566 MIR548N-201ENST00000408742 75 ntBASIC-0.83□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.83□□□□□ -2.54
SHANK1Q9Y566 U2.18-201ENST00000622185 84 ntBASIC-0.83□□□□□ -2.54
SHANK1Q9Y566 MIR548V-201ENST00000584165 80 ntBASIC-0.83□□□□□ -2.54
SHANK1Q9Y566 MIR548AA1-201ENST00000384971 97 ntBASIC-0.84□□□□□ -2.54
SHANK1Q9Y566 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.84□□□□□ -2.54
SHANK1Q9Y566 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.84□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.84□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.84□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.84□□□□□ -2.54
SHANK1Q9Y566 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.84□□□□□ -2.54
SHANK1Q9Y566 RNU6-604P-201ENST00000390917 100 ntBASIC-0.84□□□□□ -2.54
SHANK1Q9Y566 RNU6-247P-201ENST00000362636 107 ntBASIC-0.85□□□□□ -2.55
SHANK1Q9Y566 MT-TM-201ENST00000387377 68 ntBASIC-0.85□□□□□ -2.55
SHANK1Q9Y566 RNU6-995P-201ENST00000391244 107 ntBASIC-0.85□□□□□ -2.55
SHANK1Q9Y566 RNU6-118P-201ENST00000516552 102 ntBASIC-0.85□□□□□ -2.55
SHANK1Q9Y566 RNU7-151P-201ENST00000516930 53 ntBASIC-0.85□□□□□ -2.55
SHANK1Q9Y566 MIR5582-201ENST00000579697 68 ntBASIC-0.85□□□□□ -2.55
SHANK1Q9Y566 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.86□□□□□ -2.55
SHANK1Q9Y566 SNORD116-16-201ENST00000384533 92 ntBASIC-0.86□□□□□ -2.55
SHANK1Q9Y566 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.86□□□□□ -2.55
SHANK1Q9Y566 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.86□□□□□ -2.55
SHANK1Q9Y566 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.87□□□□□ -2.55
SHANK1Q9Y566 RNU6-668P-201ENST00000364180 107 ntBASIC-0.87□□□□□ -2.55
SHANK1Q9Y566 MIR548W-201ENST00000581970 74 ntBASIC-0.87□□□□□ -2.55
SHANK1Q9Y566 IGLL4P-201ENST00000614590 133 ntBASIC-0.87□□□□□ -2.55
SHANK1Q9Y566 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.87□□□□□ -2.55
SHANK1Q9Y566 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.87□□□□□ -2.55
SHANK1Q9Y566 SNORA41B-201ENST00000384785 128 ntBASIC-0.87□□□□□ -2.55
SHANK1Q9Y566 SNORD113-2-201ENST00000391082 72 ntBASIC-0.87□□□□□ -2.55
SHANK1Q9Y566 RPL35AP4-201ENST00000412007 102 ntBASIC-0.87□□□□□ -2.55
SHANK1Q9Y566 U6.97-201ENST00000636904 101 ntBASIC-0.87□□□□□ -2.55
SHANK1Q9Y566 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.88□□□□□ -2.55
SHANK1Q9Y566 MIR1255A-201ENST00000408338 113 ntBASIC-0.88□□□□□ -2.55
SHANK1Q9Y566 MIR4712-201ENST00000583750 82 ntBASIC-0.88□□□□□ -2.55
SHANK1Q9Y566 MIR1245B-201ENST00000636115 69 ntBASIC-0.88□□□□□ -2.55
SHANK1Q9Y566 RNU6-194P-201ENST00000363862 105 ntBASIC-0.89□□□□□ -2.55
SHANK1Q9Y566 SNORD113-3-201ENST00000364830 72 ntBASIC-0.89□□□□□ -2.55
SHANK1Q9Y566 MIR3202-2-201ENST00000635980 79 ntBASIC-0.89□□□□□ -2.55
SHANK1Q9Y566 SNORD63.2-201ENST00000516303 64 ntBASIC-0.9□□□□□ -2.55
SHANK1Q9Y566 MIR4748-201ENST00000578076 82 ntBASIC-0.9□□□□□ -2.55
SHANK1Q9Y566 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.9□□□□□ -2.55
SHANK1Q9Y566 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.9□□□□□ -2.55
SHANK1Q9Y566 RNU6-279P-201ENST00000391297 101 ntBASIC-0.9□□□□□ -2.55
SHANK1Q9Y566 RNU6-523P-201ENST00000516304 54 ntBASIC-0.9□□□□□ -2.55
SHANK1Q9Y566 RNU6-663P-201ENST00000391105 106 ntBASIC-0.91□□□□□ -2.55
SHANK1Q9Y566 AC097484.2-201ENST00000509147 251 ntBASIC-0.91□□□□□ -2.55
SHANK1Q9Y566 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.91□□□□□ -2.56
SHANK1Q9Y566 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.91□□□□□ -2.56
SHANK1Q9Y566 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.91□□□□□ -2.56
SHANK1Q9Y566 MIR23C-201ENST00000579846 100 ntBASIC-0.91□□□□□ -2.56
SHANK1Q9Y566 MIR4484-201ENST00000582855 83 ntBASIC-0.91□□□□□ -2.56
SHANK1Q9Y566 RNY4P9-201ENST00000363194 97 ntBASIC-0.92□□□□□ -2.56
SHANK1Q9Y566 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.92□□□□□ -2.56
SHANK1Q9Y566 RNU6-68P-201ENST00000516576 104 ntBASIC-0.92□□□□□ -2.56
SHANK1Q9Y566 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.92□□□□□ -2.56
SHANK1Q9Y566 SNORD60.1-201ENST00000362451 73 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 RNU6-940P-201ENST00000363433 104 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 SNORD115-31-201ENST00000365318 82 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 RNU6-141P-201ENST00000410499 105 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 AC062037.1-201ENST00000605302 128 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 RNU6-92P-201ENST00000605893 104 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 MIR581-201ENST00000384895 96 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms