Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU6-172P-201ENST00000411000 93 ntBASIC-1.9□□□□□ -2.71
SHROOM4Q9ULL8 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.91□□□□□ -2.72
SHROOM4Q9ULL8 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.91□□□□□ -2.72
SHROOM4Q9ULL8 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.91□□□□□ -2.72
SHROOM4Q9ULL8 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.91□□□□□ -2.72
SHROOM4Q9ULL8 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.91□□□□□ -2.72
SHROOM4Q9ULL8 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.91□□□□□ -2.72
SHROOM4Q9ULL8 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.91□□□□□ -2.72
SHROOM4Q9ULL8 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.91□□□□□ -2.72
SHROOM4Q9ULL8 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.92□□□□□ -2.72
SHROOM4Q9ULL8 AL606753.1-201ENST00000427435 87 ntBASIC-1.92□□□□□ -2.72
SHROOM4Q9ULL8 MIR4484-201ENST00000582855 83 ntBASIC-1.92□□□□□ -2.72
SHROOM4Q9ULL8 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.93□□□□□ -2.72
SHROOM4Q9ULL8 SNORD60-201ENST00000383903 83 ntBASIC-1.93□□□□□ -2.72
SHROOM4Q9ULL8 MIR125B1-201ENST00000385236 88 ntBASIC-1.93□□□□□ -2.72
SHROOM4Q9ULL8 MIR202-201ENST00000362219 110 ntBASIC-1.94□□□□□ -2.72
SHROOM4Q9ULL8 RNU6-520P-201ENST00000384717 104 ntBASIC-1.94□□□□□ -2.72
SHROOM4Q9ULL8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
SHROOM4Q9ULL8 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
SHROOM4Q9ULL8 MIR664A-201ENST00000626086 82 ntBASIC-1.94□□□□□ -2.72
SHROOM4Q9ULL8 RNY4P9-201ENST00000363194 97 ntBASIC-1.94□□□□□ -2.72
SHROOM4Q9ULL8 RNU6-686P-201ENST00000364839 107 ntBASIC-1.94□□□□□ -2.72
SHROOM4Q9ULL8 SNORD45A-201ENST00000384512 84 ntBASIC-1.94□□□□□ -2.72
SHROOM4Q9ULL8 RNU6-557P-201ENST00000516842 110 ntBASIC-1.94□□□□□ -2.72
SHROOM4Q9ULL8 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.95□□□□□ -2.72
SHROOM4Q9ULL8 RNU6-912P-201ENST00000363800 104 ntBASIC-1.95□□□□□ -2.72
SHROOM4Q9ULL8 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.95□□□□□ -2.72
SHROOM4Q9ULL8 RNU6-267P-201ENST00000516714 103 ntBASIC-1.95□□□□□ -2.72
SHROOM4Q9ULL8 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.96□□□□□ -2.72
SHROOM4Q9ULL8 RNU6-649P-201ENST00000384463 107 ntBASIC-1.96□□□□□ -2.72
SHROOM4Q9ULL8 MIR548N-201ENST00000408742 75 ntBASIC-1.97□□□□□ -2.72
SHROOM4Q9ULL8 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.97□□□□□ -2.72
SHROOM4Q9ULL8 RNY1P1-201ENST00000364372 112 ntBASIC-1.98□□□□□ -2.73
SHROOM4Q9ULL8 RNU6-141P-201ENST00000410499 105 ntBASIC-1.98□□□□□ -2.73
SHROOM4Q9ULL8 MIR8053-201ENST00000613344 75 ntBASIC-1.98□□□□□ -2.73
SHROOM4Q9ULL8 SNORD113-1-201ENST00000365321 69 ntBASIC-1.99□□□□□ -2.73
SHROOM4Q9ULL8 SNORA17.4-201ENST00000391287 132 ntBASIC-1.99□□□□□ -2.73
SHROOM4Q9ULL8 SNORD113-3-201ENST00000364830 72 ntBASIC-2□□□□□ -2.73
SHROOM4Q9ULL8 RNU6-129P-201ENST00000391022 107 ntBASIC-2□□□□□ -2.73
SHROOM4Q9ULL8 MIR548BB-201ENST00000626714 66 ntBASIC-2□□□□□ -2.73
SHROOM4Q9ULL8 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.01□□□□□ -2.73
SHROOM4Q9ULL8 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.01□□□□□ -2.73
SHROOM4Q9ULL8 RNA5SP173-201ENST00000364857 136 ntBASIC-2.01□□□□□ -2.73
SHROOM4Q9ULL8 MALAT1.1-201ENST00000618249 95 ntBASIC-2.01□□□□□ -2.73
SHROOM4Q9ULL8 MIR1297-201ENST00000637311 77 ntBASIC-2.01□□□□□ -2.73
SHROOM4Q9ULL8 RNU6-755P-201ENST00000364400 103 ntBASIC-2.02□□□□□ -2.73
SHROOM4Q9ULL8 RNU6-219P-201ENST00000364728 107 ntBASIC-2.02□□□□□ -2.73
SHROOM4Q9ULL8 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.02□□□□□ -2.73
SHROOM4Q9ULL8 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.03□□□□□ -2.73
SHROOM4Q9ULL8 RNU6-810P-201ENST00000364001 107 ntBASIC-2.03□□□□□ -2.73
SHROOM4Q9ULL8 RNU6-361P-201ENST00000364454 107 ntBASIC-2.03□□□□□ -2.73
SHROOM4Q9ULL8 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.03□□□□□ -2.73
SHROOM4Q9ULL8 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.03□□□□□ -2.73
SHROOM4Q9ULL8 RNU6-402P-201ENST00000410678 103 ntBASIC-2.03□□□□□ -2.73
SHROOM4Q9ULL8 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.03□□□□□ -2.73
SHROOM4Q9ULL8 RNU6-497P-201ENST00000365316 104 ntBASIC-2.04□□□□□ -2.74
SHROOM4Q9ULL8 SNORD116-24-201ENST00000384549 92 ntBASIC-2.04□□□□□ -2.74
SHROOM4Q9ULL8 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.04□□□□□ -2.74
SHROOM4Q9ULL8 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.04□□□□□ -2.74
SHROOM4Q9ULL8 SNORA63.4-201ENST00000362763 126 ntBASIC-2.05□□□□□ -2.74
SHROOM4Q9ULL8 RNU6-789P-201ENST00000517105 102 ntBASIC-2.05□□□□□ -2.74
SHROOM4Q9ULL8 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.06□□□□□ -2.74
SHROOM4Q9ULL8 RNU6-530P-201ENST00000391180 107 ntBASIC-2.06□□□□□ -2.74
SHROOM4Q9ULL8 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.07□□□□□ -2.74
SHROOM4Q9ULL8 RNU6-68P-201ENST00000516576 104 ntBASIC-2.07□□□□□ -2.74
SHROOM4Q9ULL8 RNU7-160P-201ENST00000516660 62 ntBASIC-2.07□□□□□ -2.74
SHROOM4Q9ULL8 RNU6-828P-201ENST00000364876 107 ntBASIC-2.07□□□□□ -2.74
SHROOM4Q9ULL8 AL603908.1-201ENST00000406098 201 ntBASIC-2.07□□□□□ -2.74
SHROOM4Q9ULL8 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.07□□□□□ -2.74
SHROOM4Q9ULL8 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.08□□□□□ -2.74
SHROOM4Q9ULL8 MIR7110-201ENST00000612638 86 ntBASIC-2.08□□□□□ -2.74
SHROOM4Q9ULL8 RNU6-32P-201ENST00000383948 107 ntBASIC-2.09□□□□□ -2.74
SHROOM4Q9ULL8 RNU6-13P-201ENST00000384248 107 ntBASIC-2.09□□□□□ -2.74
SHROOM4Q9ULL8 RNU6-12P-201ENST00000384604 107 ntBASIC-2.09□□□□□ -2.74
SHROOM4Q9ULL8 RNU6-41P-201ENST00000384741 107 ntBASIC-2.09□□□□□ -2.74
SHROOM4Q9ULL8 RNU6-92P-201ENST00000605893 104 ntBASIC-2.09□□□□□ -2.74
SHROOM4Q9ULL8 MIR379-201ENST00000362218 67 ntBASIC-2.1□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.1□□□□□ -2.75
SHROOM4Q9ULL8 SNORD116.2-201ENST00000391251 93 ntBASIC-2.1□□□□□ -2.75
SHROOM4Q9ULL8 AC006160.2-201ENST00000637708 154 ntBASIC-2.1□□□□□ -2.75
SHROOM4Q9ULL8 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.11□□□□□ -2.75
SHROOM4Q9ULL8 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.11□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.11□□□□□ -2.75
SHROOM4Q9ULL8 MIR548AI-201ENST00000579940 88 ntBASIC-2.11□□□□□ -2.75
SHROOM4Q9ULL8 SNORD60.1-201ENST00000362451 73 ntBASIC-2.12□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.12□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.12□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-542P-201ENST00000516405 103 ntBASIC-2.12□□□□□ -2.75
SHROOM4Q9ULL8 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.13□□□□□ -2.75
SHROOM4Q9ULL8 MIR1254-1-201ENST00000408257 97 ntBASIC-2.13□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-380P-201ENST00000410207 107 ntBASIC-2.13□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-70P-201ENST00000516438 60 ntBASIC-2.13□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-230P-201ENST00000362457 104 ntBASIC-2.14□□□□□ -2.75
SHROOM4Q9ULL8 MIR154-201ENST00000385243 84 ntBASIC-2.14□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-231P-201ENST00000517122 103 ntBASIC-2.14□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.14□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-895P-201ENST00000384125 103 ntBASIC-2.15□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-919P-201ENST00000516731 104 ntBASIC-2.15□□□□□ -2.75
SHROOM4Q9ULL8 MIR4426-201ENST00000640330 63 ntBASIC-2.15□□□□□ -2.75
SHROOM4Q9ULL8 RNU6-590P-201ENST00000365039 107 ntBASIC-2.16□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms