Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.84□□□□□ -2.54
LIMA1Q9UHB6 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.84□□□□□ -2.54
LIMA1Q9UHB6 AC103706.3-201ENST00000636297 85 ntBASIC-0.84□□□□□ -2.54
LIMA1Q9UHB6 RNU6-172P-201ENST00000411000 93 ntBASIC-0.85□□□□□ -2.55
LIMA1Q9UHB6 AC114801.3-201ENST00000510231 177 ntBASIC-0.85□□□□□ -2.55
LIMA1Q9UHB6 RNU6-122P-201ENST00000516818 107 ntBASIC-0.85□□□□□ -2.55
LIMA1Q9UHB6 RNA5SP26-201ENST00000362406 119 ntBASIC-0.86□□□□□ -2.55
LIMA1Q9UHB6 MIR548AA1-201ENST00000384971 97 ntBASIC-0.86□□□□□ -2.55
LIMA1Q9UHB6 MIR507-201ENST00000385234 94 ntBASIC-0.86□□□□□ -2.55
LIMA1Q9UHB6 MIR29B1-201ENST00000385015 81 ntBASIC-0.87□□□□□ -2.55
LIMA1Q9UHB6 RNU7-151P-201ENST00000516930 53 ntBASIC-0.87□□□□□ -2.55
LIMA1Q9UHB6 snoU83B.1-201ENST00000517136 88 ntBASIC-0.88□□□□□ -2.55
LIMA1Q9UHB6 MIR3165-201ENST00000579874 75 ntBASIC-0.88□□□□□ -2.55
LIMA1Q9UHB6 MIR4490-201ENST00000582647 84 ntBASIC-0.88□□□□□ -2.55
LIMA1Q9UHB6 MIR3170-201ENST00000582699 77 ntBASIC-0.88□□□□□ -2.55
LIMA1Q9UHB6 MIR7978-201ENST00000636158 59 ntBASIC-0.88□□□□□ -2.55
LIMA1Q9UHB6 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.89□□□□□ -2.55
LIMA1Q9UHB6 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.89□□□□□ -2.55
LIMA1Q9UHB6 RNU6-231P-201ENST00000517122 103 ntBASIC-0.89□□□□□ -2.55
LIMA1Q9UHB6 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.89□□□□□ -2.55
LIMA1Q9UHB6 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.89□□□□□ -2.55
LIMA1Q9UHB6 MIR6818-201ENST00000621576 65 ntBASIC-0.89□□□□□ -2.55
LIMA1Q9UHB6 RNU6-608P-201ENST00000383927 104 ntBASIC-0.9□□□□□ -2.55
LIMA1Q9UHB6 MIR579-201ENST00000385221 98 ntBASIC-0.9□□□□□ -2.55
LIMA1Q9UHB6 RPL35AP4-201ENST00000412007 102 ntBASIC-0.9□□□□□ -2.55
LIMA1Q9UHB6 RNA5SP180-201ENST00000516181 101 ntBASIC-0.9□□□□□ -2.55
LIMA1Q9UHB6 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.9□□□□□ -2.55
LIMA1Q9UHB6 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.91□□□□□ -2.56
LIMA1Q9UHB6 AC110620.1-201ENST00000416042 228 ntBASIC-0.91□□□□□ -2.56
LIMA1Q9UHB6 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.91□□□□□ -2.56
LIMA1Q9UHB6 MIR365A-201ENST00000362260 87 ntBASIC-0.92□□□□□ -2.56
LIMA1Q9UHB6 MIR1285-2-201ENST00000408311 88 ntBASIC-0.92□□□□□ -2.56
LIMA1Q9UHB6 RNU7-134P-201ENST00000458997 64 ntBASIC-0.92□□□□□ -2.56
LIMA1Q9UHB6 MIR4499-201ENST00000584834 69 ntBASIC-0.92□□□□□ -2.56
LIMA1Q9UHB6 RNU6-471P-201ENST00000383944 106 ntBASIC-0.93□□□□□ -2.56
LIMA1Q9UHB6 MIR125B1-201ENST00000385236 88 ntBASIC-0.93□□□□□ -2.56
LIMA1Q9UHB6 RNU6-940P-201ENST00000363433 104 ntBASIC-0.94□□□□□ -2.56
LIMA1Q9UHB6 SNORD114-3-201ENST00000364969 75 ntBASIC-0.94□□□□□ -2.56
LIMA1Q9UHB6 RNU6-258P-201ENST00000390884 101 ntBASIC-0.94□□□□□ -2.56
LIMA1Q9UHB6 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.94□□□□□ -2.56
LIMA1Q9UHB6 MIR7110-201ENST00000612638 86 ntBASIC-0.94□□□□□ -2.56
LIMA1Q9UHB6 uc_338.19-201ENST00000616808 99 ntBASIC-0.94□□□□□ -2.56
LIMA1Q9UHB6 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.94□□□□□ -2.56
LIMA1Q9UHB6 RNU6-669P-201ENST00000365575 107 ntBASIC-0.95□□□□□ -2.56
LIMA1Q9UHB6 RNU6-995P-201ENST00000391244 107 ntBASIC-0.95□□□□□ -2.56
LIMA1Q9UHB6 AC090616.4-201ENST00000448026 115 ntBASIC-0.95□□□□□ -2.56
LIMA1Q9UHB6 MIR4441-201ENST00000582623 100 ntBASIC-0.95□□□□□ -2.56
LIMA1Q9UHB6 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.96□□□□□ -2.56
LIMA1Q9UHB6 MIR1207-201ENST00000408249 87 ntBASIC-0.96□□□□□ -2.56
LIMA1Q9UHB6 RNU6-810P-201ENST00000364001 107 ntBASIC-0.97□□□□□ -2.56
LIMA1Q9UHB6 SNORD116.2-201ENST00000391251 93 ntBASIC-0.97□□□□□ -2.56
LIMA1Q9UHB6 SNORA40.16-201ENST00000517238 121 ntBASIC-0.97□□□□□ -2.56
LIMA1Q9UHB6 MIR466-201ENST00000580653 84 ntBASIC-0.97□□□□□ -2.56
LIMA1Q9UHB6 RNU6-247P-201ENST00000362636 107 ntBASIC-0.99□□□□□ -2.57
LIMA1Q9UHB6 MIR3938-201ENST00000582157 103 ntBASIC-0.99□□□□□ -2.57
LIMA1Q9UHB6 Y_RNA.69-201ENST00000362885 109 ntBASIC-1□□□□□ -2.57
LIMA1Q9UHB6 SNORA40B-201ENST00000385573 128 ntBASIC-1□□□□□ -2.57
LIMA1Q9UHB6 SNORD63.2-201ENST00000516303 64 ntBASIC-1□□□□□ -2.57
LIMA1Q9UHB6 RNU7-160P-201ENST00000516660 62 ntBASIC-1□□□□□ -2.57
LIMA1Q9UHB6 MIR4306-201ENST00000583390 91 ntBASIC-1□□□□□ -2.57
LIMA1Q9UHB6 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.01□□□□□ -2.57
LIMA1Q9UHB6 RNU6-974P-201ENST00000384099 108 ntBASIC-1.01□□□□□ -2.57
LIMA1Q9UHB6 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.01□□□□□ -2.57
LIMA1Q9UHB6 RNY4P27-201ENST00000363341 96 ntBASIC-1.02□□□□□ -2.57
LIMA1Q9UHB6 RNU6-164P-201ENST00000364604 103 ntBASIC-1.03□□□□□ -2.57
LIMA1Q9UHB6 MIR1246-201ENST00000636535 73 ntBASIC-1.03□□□□□ -2.57
LIMA1Q9UHB6 RNU7-119P-201ENST00000459279 63 ntBASIC-1.04□□□□□ -2.58
LIMA1Q9UHB6 RNU6-576P-201ENST00000390854 102 ntBASIC-1.05□□□□□ -2.58
LIMA1Q9UHB6 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.05□□□□□ -2.58
LIMA1Q9UHB6 RNU6-590P-201ENST00000365039 107 ntBASIC-1.06□□□□□ -2.58
LIMA1Q9UHB6 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.06□□□□□ -2.58
LIMA1Q9UHB6 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.06□□□□□ -2.58
LIMA1Q9UHB6 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.07□□□□□ -2.58
LIMA1Q9UHB6 SNORA27.2-201ENST00000363365 126 ntBASIC-1.07□□□□□ -2.58
LIMA1Q9UHB6 RNU6-226P-201ENST00000363778 107 ntBASIC-1.07□□□□□ -2.58
LIMA1Q9UHB6 RNU6-520P-201ENST00000384717 104 ntBASIC-1.07□□□□□ -2.58
LIMA1Q9UHB6 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.07□□□□□ -2.58
LIMA1Q9UHB6 RNU6-828P-201ENST00000364876 107 ntBASIC-1.08□□□□□ -2.58
LIMA1Q9UHB6 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
LIMA1Q9UHB6 RNU6-706P-201ENST00000517229 104 ntBASIC-1.08□□□□□ -2.58
LIMA1Q9UHB6 AC091912.2-201ENST00000624798 167 ntBASIC-1.08□□□□□ -2.58
LIMA1Q9UHB6 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.09□□□□□ -2.58
LIMA1Q9UHB6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
LIMA1Q9UHB6 MIR6874-201ENST00000635894 71 ntBASIC-1.09□□□□□ -2.58
LIMA1Q9UHB6 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.1□□□□□ -2.59
LIMA1Q9UHB6 RNU6-446P-201ENST00000362827 106 ntBASIC-1.11□□□□□ -2.59
LIMA1Q9UHB6 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.11□□□□□ -2.59
LIMA1Q9UHB6 AC018880.2-201ENST00000414265 201 ntBASIC-1.11□□□□□ -2.59
LIMA1Q9UHB6 MIR23C-201ENST00000579846 100 ntBASIC-1.11□□□□□ -2.59
LIMA1Q9UHB6 RNU6-79P-201ENST00000362511 107 ntBASIC-1.12□□□□□ -2.59
LIMA1Q9UHB6 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.12□□□□□ -2.59
LIMA1Q9UHB6 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.12□□□□□ -2.59
LIMA1Q9UHB6 RNU6-563P-201ENST00000364872 108 ntBASIC-1.13□□□□□ -2.59
LIMA1Q9UHB6 AC139453.2-201ENST00000487255 133 ntBASIC-1.13□□□□□ -2.59
LIMA1Q9UHB6 MIR8485-201ENST00000401372 91 ntBASIC-1.14□□□□□ -2.59
LIMA1Q9UHB6 AC120024.2-201ENST00000576526 175 ntBASIC-1.14□□□□□ -2.59
LIMA1Q9UHB6 RNY3P8-201ENST00000411366 126 ntBASIC-1.15□□□□□ -2.59
LIMA1Q9UHB6 HLA-S-202ENST00000425174 53 ntBASIC-1.15□□□□□ -2.59
LIMA1Q9UHB6 AC125388.1-201ENST00000459631 156 ntBASIC-1.16□□□□□ -2.6
LIMA1Q9UHB6 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms