Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU6-540P-201ENST00000384622 101 ntBASIC-1.16□□□□□ -2.6
POLR1BQ9H9Y6 AC013734.1-201ENST00000619329 111 ntBASIC-1.16□□□□□ -2.6
POLR1BQ9H9Y6 RNU6-669P-201ENST00000365575 107 ntBASIC-1.17□□□□□ -2.6
POLR1BQ9H9Y6 MIR3123-201ENST00000583417 75 ntBASIC-1.17□□□□□ -2.6
POLR1BQ9H9Y6 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.17□□□□□ -2.6
POLR1BQ9H9Y6 RNU6-172P-201ENST00000411000 93 ntBASIC-1.18□□□□□ -2.6
POLR1BQ9H9Y6 RNA5SP461-201ENST00000516451 104 ntBASIC-1.18□□□□□ -2.6
POLR1BQ9H9Y6 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.18□□□□□ -2.6
POLR1BQ9H9Y6 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.18□□□□□ -2.6
POLR1BQ9H9Y6 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.19□□□□□ -2.6
POLR1BQ9H9Y6 RNU6-820P-201ENST00000384273 107 ntBASIC-1.19□□□□□ -2.6
POLR1BQ9H9Y6 MIR579-201ENST00000385221 98 ntBASIC-1.19□□□□□ -2.6
POLR1BQ9H9Y6 RNU6-523P-201ENST00000516304 54 ntBASIC-1.19□□□□□ -2.6
POLR1BQ9H9Y6 RNU6-687P-201ENST00000516443 89 ntBASIC-1.19□□□□□ -2.6
POLR1BQ9H9Y6 RNA5SP170-201ENST00000517150 101 ntBASIC-1.19□□□□□ -2.6
POLR1BQ9H9Y6 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.2□□□□□ -2.6
POLR1BQ9H9Y6 SNORA27.2-201ENST00000363365 126 ntBASIC-1.2□□□□□ -2.6
POLR1BQ9H9Y6 RNA5SP173-201ENST00000364857 136 ntBASIC-1.2□□□□□ -2.6
POLR1BQ9H9Y6 RNU6-841P-201ENST00000383872 107 ntBASIC-1.2□□□□□ -2.6
POLR1BQ9H9Y6 AC108019.1-201ENST00000512540 175 ntBASIC-1.2□□□□□ -2.6
POLR1BQ9H9Y6 SNORD63.2-201ENST00000516303 64 ntBASIC-1.2□□□□□ -2.6
POLR1BQ9H9Y6 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.2□□□□□ -2.6
POLR1BQ9H9Y6 RNU6-228P-201ENST00000362700 106 ntBASIC-1.21□□□□□ -2.6
POLR1BQ9H9Y6 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.21□□□□□ -2.6
POLR1BQ9H9Y6 RNU6-247P-201ENST00000362636 107 ntBASIC-1.22□□□□□ -2.6
POLR1BQ9H9Y6 SNORD18.1-201ENST00000363807 70 ntBASIC-1.22□□□□□ -2.6
POLR1BQ9H9Y6 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.22□□□□□ -2.6
POLR1BQ9H9Y6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
POLR1BQ9H9Y6 RNY3P8-201ENST00000411366 126 ntBASIC-1.22□□□□□ -2.6
POLR1BQ9H9Y6 MIR548AM-201ENST00000584298 74 ntBASIC-1.22□□□□□ -2.6
POLR1BQ9H9Y6 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.23□□□□□ -2.61
POLR1BQ9H9Y6 SNORD73B-201ENST00000364394 72 ntBASIC-1.23□□□□□ -2.61
POLR1BQ9H9Y6 MIR4756-201ENST00000577874 78 ntBASIC-1.23□□□□□ -2.61
POLR1BQ9H9Y6 SNORD60.1-201ENST00000362451 73 ntBASIC-1.24□□□□□ -2.61
POLR1BQ9H9Y6 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.24□□□□□ -2.61
POLR1BQ9H9Y6 MIR581-201ENST00000384895 96 ntBASIC-1.24□□□□□ -2.61
POLR1BQ9H9Y6 RNU6-542P-201ENST00000516405 103 ntBASIC-1.24□□□□□ -2.61
POLR1BQ9H9Y6 RNU6-92P-201ENST00000605893 104 ntBASIC-1.24□□□□□ -2.61
POLR1BQ9H9Y6 U4.2-201ENST00000618561 85 ntBASIC-1.24□□□□□ -2.61
POLR1BQ9H9Y6 RNU6-995P-201ENST00000391244 107 ntBASIC-1.25□□□□□ -2.61
POLR1BQ9H9Y6 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.26□□□□□ -2.61
POLR1BQ9H9Y6 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.26□□□□□ -2.61
POLR1BQ9H9Y6 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.26□□□□□ -2.61
POLR1BQ9H9Y6 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.26□□□□□ -2.61
POLR1BQ9H9Y6 MIR548W-201ENST00000581970 74 ntBASIC-1.26□□□□□ -2.61
POLR1BQ9H9Y6 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.26□□□□□ -2.61
POLR1BQ9H9Y6 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.26□□□□□ -2.61
POLR1BQ9H9Y6 RNU6-573P-201ENST00000383938 106 ntBASIC-1.27□□□□□ -2.61
POLR1BQ9H9Y6 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.27□□□□□ -2.61
POLR1BQ9H9Y6 RNU6-983P-201ENST00000516004 103 ntBASIC-1.27□□□□□ -2.61
POLR1BQ9H9Y6 RNA5SP180-201ENST00000516181 101 ntBASIC-1.27□□□□□ -2.61
POLR1BQ9H9Y6 RNU7-160P-201ENST00000516660 62 ntBASIC-1.27□□□□□ -2.61
POLR1BQ9H9Y6 MIR664B-201ENST00000626756 61 ntBASIC-1.27□□□□□ -2.61
POLR1BQ9H9Y6 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.27□□□□□ -2.61
POLR1BQ9H9Y6 MIR1246-201ENST00000636535 73 ntBASIC-1.27□□□□□ -2.61
POLR1BQ9H9Y6 RNU6-411P-201ENST00000384451 107 ntBASIC-1.28□□□□□ -2.61
POLR1BQ9H9Y6 RNU6-231P-201ENST00000517122 103 ntBASIC-1.29□□□□□ -2.62
POLR1BQ9H9Y6 U7.4-201ENST00000614961 63 ntBASIC-1.29□□□□□ -2.62
POLR1BQ9H9Y6 U6.97-201ENST00000636904 101 ntBASIC-1.29□□□□□ -2.62
POLR1BQ9H9Y6 RNU6-810P-201ENST00000364001 107 ntBASIC-1.3□□□□□ -2.62
POLR1BQ9H9Y6 MIR1207-201ENST00000408249 87 ntBASIC-1.3□□□□□ -2.62
POLR1BQ9H9Y6 RNU4-88P-201ENST00000411220 86 ntBASIC-1.3□□□□□ -2.62
POLR1BQ9H9Y6 MIR365A-201ENST00000362260 87 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 SNORD114-3-201ENST00000364969 75 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 SNORA26.2-201ENST00000390922 122 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 RNY4P29-201ENST00000410801 97 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 RNU6-634P-201ENST00000459134 106 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 snoU13.10-201ENST00000459301 103 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 SNORA40.16-201ENST00000517238 121 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 MIR7110-201ENST00000612638 86 ntBASIC-1.31□□□□□ -2.62
POLR1BQ9H9Y6 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.32□□□□□ -2.62
POLR1BQ9H9Y6 MIR548N-201ENST00000408742 75 ntBASIC-1.32□□□□□ -2.62
POLR1BQ9H9Y6 RNU6-828P-201ENST00000364876 107 ntBASIC-1.33□□□□□ -2.62
POLR1BQ9H9Y6 RNU6-520P-201ENST00000384717 104 ntBASIC-1.33□□□□□ -2.62
POLR1BQ9H9Y6 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.33□□□□□ -2.62
POLR1BQ9H9Y6 RNU6-122P-201ENST00000516818 107 ntBASIC-1.33□□□□□ -2.62
POLR1BQ9H9Y6 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.33□□□□□ -2.62
POLR1BQ9H9Y6 MIR202-201ENST00000362219 110 ntBASIC-1.34□□□□□ -2.62
POLR1BQ9H9Y6 SNORD18C-201ENST00000362704 69 ntBASIC-1.34□□□□□ -2.62
POLR1BQ9H9Y6 SNORA40B-201ENST00000385573 128 ntBASIC-1.34□□□□□ -2.62
POLR1BQ9H9Y6 MIR1285-2-201ENST00000408311 88 ntBASIC-1.34□□□□□ -2.62
POLR1BQ9H9Y6 MIR1255A-201ENST00000408338 113 ntBASIC-1.34□□□□□ -2.62
POLR1BQ9H9Y6 RNU6-68P-201ENST00000516576 104 ntBASIC-1.34□□□□□ -2.62
POLR1BQ9H9Y6 RNU6-980P-201ENST00000516925 103 ntBASIC-1.34□□□□□ -2.62
POLR1BQ9H9Y6 MIR3202-2-201ENST00000635980 79 ntBASIC-1.34□□□□□ -2.62
POLR1BQ9H9Y6 SNORA25.5-201ENST00000363782 126 ntBASIC-1.35□□□□□ -2.63
POLR1BQ9H9Y6 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.35□□□□□ -2.63
POLR1BQ9H9Y6 RNU6-361P-201ENST00000364454 107 ntBASIC-1.35□□□□□ -2.63
POLR1BQ9H9Y6 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.35□□□□□ -2.63
POLR1BQ9H9Y6 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
POLR1BQ9H9Y6 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.36□□□□□ -2.63
POLR1BQ9H9Y6 RNU6-663P-201ENST00000391105 106 ntBASIC-1.36□□□□□ -2.63
POLR1BQ9H9Y6 SNORD116.2-201ENST00000391251 93 ntBASIC-1.36□□□□□ -2.63
POLR1BQ9H9Y6 RNU6-649P-201ENST00000384463 107 ntBASIC-1.37□□□□□ -2.63
POLR1BQ9H9Y6 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.37□□□□□ -2.63
POLR1BQ9H9Y6 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms