Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 MIR664A-201ENST00000626086 82 ntBASIC-1.99□□□□□ -2.73
USP42Q9H9J4 AC008267.6-201ENST00000441664 139 ntBASIC-2□□□□□ -2.73
USP42Q9H9J4 MIR3133-201ENST00000583157 78 ntBASIC-2□□□□□ -2.73
USP42Q9H9J4 AL365222.1-201ENST00000614661 98 ntBASIC-2□□□□□ -2.73
USP42Q9H9J4 AP001318.4-201ENST00000616637 121 ntBASIC-2□□□□□ -2.73
USP42Q9H9J4 MIR450A1-201ENST00000362262 91 ntBASIC-2.01□□□□□ -2.73
USP42Q9H9J4 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.01□□□□□ -2.73
USP42Q9H9J4 AL031737.1-201ENST00000450125 223 ntBASIC-2.01□□□□□ -2.73
USP42Q9H9J4 AC006160.2-201ENST00000637708 154 ntBASIC-2.01□□□□□ -2.73
USP42Q9H9J4 RNY4P9-201ENST00000363194 97 ntBASIC-2.02□□□□□ -2.73
USP42Q9H9J4 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.02□□□□□ -2.73
USP42Q9H9J4 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.02□□□□□ -2.73
USP42Q9H9J4 SNORA40.13-201ENST00000516379 120 ntBASIC-2.02□□□□□ -2.73
USP42Q9H9J4 RNY1P1-201ENST00000364372 112 ntBASIC-2.03□□□□□ -2.73
USP42Q9H9J4 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.03□□□□□ -2.73
USP42Q9H9J4 RNU6-974P-201ENST00000384099 108 ntBASIC-2.03□□□□□ -2.73
USP42Q9H9J4 RNU6-141P-201ENST00000410499 105 ntBASIC-2.03□□□□□ -2.73
USP42Q9H9J4 MIR548N-201ENST00000408742 75 ntBASIC-2.04□□□□□ -2.74
USP42Q9H9J4 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.04□□□□□ -2.74
USP42Q9H9J4 AC090425.1-201ENST00000610007 140 ntBASIC-2.04□□□□□ -2.74
USP42Q9H9J4 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.05□□□□□ -2.74
USP42Q9H9J4 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.05□□□□□ -2.74
USP42Q9H9J4 SNORD113-3-201ENST00000364830 72 ntBASIC-2.06□□□□□ -2.74
USP42Q9H9J4 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.06□□□□□ -2.74
USP42Q9H9J4 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.06□□□□□ -2.74
USP42Q9H9J4 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.06□□□□□ -2.74
USP42Q9H9J4 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.07□□□□□ -2.74
USP42Q9H9J4 RNU6-675P-201ENST00000384236 104 ntBASIC-2.07□□□□□ -2.74
USP42Q9H9J4 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.07□□□□□ -2.74
USP42Q9H9J4 RNY4-201ENST00000516507 96 ntBASIC-2.07□□□□□ -2.74
USP42Q9H9J4 RNU6-789P-201ENST00000517105 102 ntBASIC-2.08□□□□□ -2.74
USP42Q9H9J4 MIR4719-201ENST00000585233 84 ntBASIC-2.08□□□□□ -2.74
USP42Q9H9J4 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.09□□□□□ -2.74
USP42Q9H9J4 RNU6-834P-201ENST00000362367 110 ntBASIC-2.09□□□□□ -2.74
USP42Q9H9J4 RNU6-315P-201ENST00000362666 107 ntBASIC-2.09□□□□□ -2.74
USP42Q9H9J4 MIR488-201ENST00000365739 83 ntBASIC-2.09□□□□□ -2.74
USP42Q9H9J4 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.09□□□□□ -2.74
USP42Q9H9J4 SNORD116-24-201ENST00000384549 92 ntBASIC-2.09□□□□□ -2.74
USP42Q9H9J4 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.1□□□□□ -2.75
USP42Q9H9J4 RNU6-895P-201ENST00000384125 103 ntBASIC-2.1□□□□□ -2.75
USP42Q9H9J4 RNU6-520P-201ENST00000384717 104 ntBASIC-2.1□□□□□ -2.75
USP42Q9H9J4 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.1□□□□□ -2.75
USP42Q9H9J4 MIR202-201ENST00000362219 110 ntBASIC-2.11□□□□□ -2.75
USP42Q9H9J4 RNU6-81P-201ENST00000365608 104 ntBASIC-2.11□□□□□ -2.75
USP42Q9H9J4 SNORD60-201ENST00000383903 83 ntBASIC-2.11□□□□□ -2.75
USP42Q9H9J4 MIR154-201ENST00000385243 84 ntBASIC-2.11□□□□□ -2.75
USP42Q9H9J4 RNU6-844P-201ENST00000517175 102 ntBASIC-2.11□□□□□ -2.75
USP42Q9H9J4 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.11□□□□□ -2.75
USP42Q9H9J4 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.12□□□□□ -2.75
USP42Q9H9J4 RNU6-68P-201ENST00000516576 104 ntBASIC-2.12□□□□□ -2.75
USP42Q9H9J4 RNU7-160P-201ENST00000516660 62 ntBASIC-2.12□□□□□ -2.75
USP42Q9H9J4 RNU6-794P-201ENST00000517261 64 ntBASIC-2.12□□□□□ -2.75
USP42Q9H9J4 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.13□□□□□ -2.75
USP42Q9H9J4 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.13□□□□□ -2.75
USP42Q9H9J4 RNU6-649P-201ENST00000384463 107 ntBASIC-2.13□□□□□ -2.75
USP42Q9H9J4 RNU6-70P-201ENST00000516438 60 ntBASIC-2.13□□□□□ -2.75
USP42Q9H9J4 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.13□□□□□ -2.75
USP42Q9H9J4 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.14□□□□□ -2.75
USP42Q9H9J4 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.14□□□□□ -2.75
USP42Q9H9J4 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.14□□□□□ -2.75
USP42Q9H9J4 RNU6-92P-201ENST00000605893 104 ntBASIC-2.14□□□□□ -2.75
USP42Q9H9J4 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.15□□□□□ -2.75
USP42Q9H9J4 RNU6-361P-201ENST00000364454 107 ntBASIC-2.15□□□□□ -2.75
USP42Q9H9J4 RNU6-828P-201ENST00000364876 107 ntBASIC-2.15□□□□□ -2.75
USP42Q9H9J4 RNU6-542P-201ENST00000516405 103 ntBASIC-2.15□□□□□ -2.75
USP42Q9H9J4 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.16□□□□□ -2.75
USP42Q9H9J4 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.16□□□□□ -2.75
USP42Q9H9J4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.16□□□□□ -2.75
USP42Q9H9J4 SNORA17.4-201ENST00000391287 132 ntBASIC-2.16□□□□□ -2.75
USP42Q9H9J4 MIR7110-201ENST00000612638 86 ntBASIC-2.16□□□□□ -2.75
USP42Q9H9J4 RNU6-640P-201ENST00000363693 105 ntBASIC-2.17□□□□□ -2.76
USP42Q9H9J4 RNU6-810P-201ENST00000364001 107 ntBASIC-2.17□□□□□ -2.76
USP42Q9H9J4 RNU6-230P-201ENST00000362457 104 ntBASIC-2.17□□□□□ -2.76
USP42Q9H9J4 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.17□□□□□ -2.76
USP42Q9H9J4 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.17□□□□□ -2.76
USP42Q9H9J4 RNU6-209P-201ENST00000384118 107 ntBASIC-2.17□□□□□ -2.76
USP42Q9H9J4 MIR548AI-201ENST00000579940 88 ntBASIC-2.17□□□□□ -2.76
USP42Q9H9J4 IGLL4P-201ENST00000614590 133 ntBASIC-2.17□□□□□ -2.76
USP42Q9H9J4 RNU6-912P-201ENST00000363800 104 ntBASIC-2.18□□□□□ -2.76
USP42Q9H9J4 RNU6-22P-201ENST00000384355 107 ntBASIC-2.18□□□□□ -2.76
USP42Q9H9J4 RNU6-530P-201ENST00000391180 107 ntBASIC-2.18□□□□□ -2.76
USP42Q9H9J4 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.18□□□□□ -2.76
USP42Q9H9J4 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.18□□□□□ -2.76
USP42Q9H9J4 SNORD60.1-201ENST00000362451 73 ntBASIC-2.19□□□□□ -2.76
USP42Q9H9J4 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.19□□□□□ -2.76
USP42Q9H9J4 MIR5588-201ENST00000581890 63 ntBASIC-2.19□□□□□ -2.76
USP42Q9H9J4 MIR379-201ENST00000362218 67 ntBASIC-2.2□□□□□ -2.76
USP42Q9H9J4 SNORD116.2-201ENST00000391251 93 ntBASIC-2.2□□□□□ -2.76
USP42Q9H9J4 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.2□□□□□ -2.76
USP42Q9H9J4 RNU6-231P-201ENST00000517122 103 ntBASIC-2.2□□□□□ -2.76
USP42Q9H9J4 RNU6-32P-201ENST00000383948 107 ntBASIC-2.21□□□□□ -2.76
USP42Q9H9J4 RNU6-13P-201ENST00000384248 107 ntBASIC-2.21□□□□□ -2.76
USP42Q9H9J4 RNU6-12P-201ENST00000384604 107 ntBASIC-2.21□□□□□ -2.76
USP42Q9H9J4 RNU6-41P-201ENST00000384741 107 ntBASIC-2.21□□□□□ -2.76
USP42Q9H9J4 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.22□□□□□ -2.77
USP42Q9H9J4 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.22□□□□□ -2.77
USP42Q9H9J4 MIR4712-201ENST00000583750 82 ntBASIC-2.22□□□□□ -2.77
USP42Q9H9J4 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.23□□□□□ -2.77
USP42Q9H9J4 RNU6-979P-201ENST00000383896 107 ntBASIC-2.23□□□□□ -2.77
USP42Q9H9J4 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.23□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms