Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 SNORD18C-201ENST00000362704 69 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 RNU6-258P-201ENST00000390884 101 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 RNU6-228P-201ENST00000362700 106 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 RNU6-313P-201ENST00000516317 112 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 SNORD63.2-201ENST00000516303 64 ntBASIC-1.95□□□□□ -2.72
SHANK3Q9BYB0 RNU6-523P-201ENST00000516304 54 ntBASIC-1.95□□□□□ -2.72
SHANK3Q9BYB0 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.95□□□□□ -2.72
SHANK3Q9BYB0 AC013734.1-201ENST00000619329 111 ntBASIC-1.95□□□□□ -2.72
SHANK3Q9BYB0 RNU7-171P-201ENST00000459581 62 ntBASIC-1.96□□□□□ -2.72
SHANK3Q9BYB0 RNU7-160P-201ENST00000516660 62 ntBASIC-1.96□□□□□ -2.72
SHANK3Q9BYB0 MIR664B-201ENST00000626756 61 ntBASIC-1.96□□□□□ -2.72
SHANK3Q9BYB0 MIR487B-201ENST00000385021 84 ntBASIC-1.97□□□□□ -2.72
SHANK3Q9BYB0 RNU6-92P-201ENST00000605893 104 ntBASIC-1.97□□□□□ -2.72
SHANK3Q9BYB0 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.97□□□□□ -2.72
SHANK3Q9BYB0 RNU6-172P-201ENST00000411000 93 ntBASIC-1.97□□□□□ -2.73
SHANK3Q9BYB0 MIR1245B-201ENST00000636115 69 ntBASIC-1.97□□□□□ -2.73
SHANK3Q9BYB0 MIR3668-201ENST00000582138 75 ntBASIC-1.98□□□□□ -2.73
SHANK3Q9BYB0 RNU6-895P-201ENST00000384125 103 ntBASIC-1.99□□□□□ -2.73
SHANK3Q9BYB0 Y_RNA.284-201ENST00000364806 102 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 MIR488-201ENST00000365739 83 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 MIR579-201ENST00000385221 98 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 MIR125B1-201ENST00000385236 88 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 RNU6-640P-201ENST00000363693 105 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 Y_RNA.186-201ENST00000363899 92 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 RNU6-1134P-201ENST00000365156 101 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 SNORD116-24-201ENST00000384549 92 ntBASIC-2.01□□□□□ -2.73
SHANK3Q9BYB0 RNU6-789P-201ENST00000517105 102 ntBASIC-2.01□□□□□ -2.73
SHANK3Q9BYB0 U6.97-201ENST00000636904 101 ntBASIC-2.01□□□□□ -2.73
SHANK3Q9BYB0 SNORD45.2-201ENST00000363552 72 ntBASIC-2.02□□□□□ -2.73
SHANK3Q9BYB0 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.03□□□□□ -2.73
SHANK3Q9BYB0 MIR5588-201ENST00000581890 63 ntBASIC-2.03□□□□□ -2.73
SHANK3Q9BYB0 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.03□□□□□ -2.73
SHANK3Q9BYB0 MIR548AI-201ENST00000579940 88 ntBASIC-2.03□□□□□ -2.73
SHANK3Q9BYB0 RNU6-147P-201ENST00000383983 107 ntBASIC-2.04□□□□□ -2.74
SHANK3Q9BYB0 RNU4-88P-201ENST00000411220 86 ntBASIC-2.04□□□□□ -2.74
SHANK3Q9BYB0 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.04□□□□□ -2.74
SHANK3Q9BYB0 RNU6-919P-201ENST00000516731 104 ntBASIC-2.04□□□□□ -2.74
SHANK3Q9BYB0 MIR4756-201ENST00000577874 78 ntBASIC-2.04□□□□□ -2.74
SHANK3Q9BYB0 MIR3910-1-201ENST00000580936 111 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 MIR379-201ENST00000362218 67 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 RNU6-361P-201ENST00000364454 107 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 RNU6-520P-201ENST00000384717 104 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 MIR548W-201ENST00000581970 74 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 RNU6-828P-201ENST00000364876 107 ntBASIC-2.06□□□□□ -2.74
SHANK3Q9BYB0 MIR548N-201ENST00000408742 75 ntBASIC-2.06□□□□□ -2.74
SHANK3Q9BYB0 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.06□□□□□ -2.74
SHANK3Q9BYB0 RNY3P8-201ENST00000411366 126 ntBASIC-2.06□□□□□ -2.74
SHANK3Q9BYB0 MIR7110-201ENST00000612638 86 ntBASIC-2.06□□□□□ -2.74
SHANK3Q9BYB0 SNORD60.1-201ENST00000362451 73 ntBASIC-2.07□□□□□ -2.74
SHANK3Q9BYB0 RNU6-974P-201ENST00000384099 108 ntBASIC-2.07□□□□□ -2.74
SHANK3Q9BYB0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.07□□□□□ -2.74
SHANK3Q9BYB0 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.07□□□□□ -2.74
SHANK3Q9BYB0 MIR450A2-201ENST00000385022 100 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 snoU13.10-201ENST00000459301 103 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 SNORA25.5-201ENST00000363782 126 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 U7.4-201ENST00000614961 63 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 RNU6-649P-201ENST00000384463 107 ntBASIC-2.1□□□□□ -2.75
SHANK3Q9BYB0 SNORD20-201ENST00000384550 80 ntBASIC-2.1□□□□□ -2.75
SHANK3Q9BYB0 SNORA17.4-201ENST00000391287 132 ntBASIC-2.1□□□□□ -2.75
SHANK3Q9BYB0 MIR4712-201ENST00000583750 82 ntBASIC-2.1□□□□□ -2.75
SHANK3Q9BYB0 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.1□□□□□ -2.75
SHANK3Q9BYB0 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.11□□□□□ -2.75
SHANK3Q9BYB0 SNORD115-31-201ENST00000365318 82 ntBASIC-2.11□□□□□ -2.75
SHANK3Q9BYB0 RNY4P30-201ENST00000410216 95 ntBASIC-2.11□□□□□ -2.75
SHANK3Q9BYB0 RNU6-176P-201ENST00000517196 105 ntBASIC-2.11□□□□□ -2.75
SHANK3Q9BYB0 RNU6-810P-201ENST00000364001 107 ntBASIC-2.12□□□□□ -2.75
SHANK3Q9BYB0 SNORD113-1-201ENST00000365321 69 ntBASIC-2.12□□□□□ -2.75
SHANK3Q9BYB0 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.12□□□□□ -2.75
SHANK3Q9BYB0 RNU6-687P-201ENST00000516443 89 ntBASIC-2.12□□□□□ -2.75
SHANK3Q9BYB0 RNU6-940P-201ENST00000363433 104 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 RNU6-411P-201ENST00000384451 107 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 MIR4748-201ENST00000578076 82 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 MIR3139-201ENST00000579145 76 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 MIR466-201ENST00000580653 84 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 RNU6-49P-201ENST00000384256 107 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 RNU7-119P-201ENST00000459279 63 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 SNORA40B-201ENST00000385573 128 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 MIR4666B-201ENST00000578142 81 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 MIR3134-201ENST00000579433 74 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 RNA5SP405-201ENST00000363059 114 ntBASIC-2.15□□□□□ -2.75
SHANK3Q9BYB0 RNU6-215P-201ENST00000365169 102 ntBASIC-2.15□□□□□ -2.75
SHANK3Q9BYB0 RNA5SP89-201ENST00000410300 108 ntBASIC-2.15□□□□□ -2.75
SHANK3Q9BYB0 RNU6-194P-201ENST00000363862 105 ntBASIC-2.16□□□□□ -2.75
SHANK3Q9BYB0 SNORD116.2-201ENST00000391251 93 ntBASIC-2.16□□□□□ -2.75
SHANK3Q9BYB0 AL606753.1-201ENST00000427435 87 ntBASIC-2.16□□□□□ -2.75
SHANK3Q9BYB0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.16□□□□□ -2.75
SHANK3Q9BYB0 MIR202-201ENST00000362219 110 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 RNU6-663P-201ENST00000391105 106 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 AC097484.2-201ENST00000509147 251 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 262.4 ms