Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.69□□□□□ -2.84
LIMD2Q9BT23 RNA5SP173-201ENST00000364857 136 ntBASIC-2.69□□□□□ -2.84
LIMD2Q9BT23 RNU6-129P-201ENST00000391022 107 ntBASIC-2.69□□□□□ -2.84
LIMD2Q9BT23 AC139453.2-201ENST00000487255 133 ntBASIC-2.69□□□□□ -2.84
LIMD2Q9BT23 SNORA40.16-201ENST00000517238 121 ntBASIC-2.69□□□□□ -2.84
LIMD2Q9BT23 MIR664A-201ENST00000626086 82 ntBASIC-2.69□□□□□ -2.84
LIMD2Q9BT23 RNY4P13-201ENST00000384284 96 ntBASIC-2.7□□□□□ -2.84
LIMD2Q9BT23 MIR656-201ENST00000385224 78 ntBASIC-2.7□□□□□ -2.84
LIMD2Q9BT23 RNU6-788P-201ENST00000390967 104 ntBASIC-2.7□□□□□ -2.84
LIMD2Q9BT23 RNU7-61P-201ENST00000515897 61 ntBASIC-2.7□□□□□ -2.84
LIMD2Q9BT23 MIR4484-201ENST00000582855 83 ntBASIC-2.7□□□□□ -2.84
LIMD2Q9BT23 RNA5SP224-201ENST00000365069 126 ntBASIC-2.71□□□□□ -2.84
LIMD2Q9BT23 SNORD116-24-201ENST00000384549 92 ntBASIC-2.71□□□□□ -2.84
LIMD2Q9BT23 Y_RNA.535-201ENST00000384612 99 ntBASIC-2.71□□□□□ -2.84
LIMD2Q9BT23 SNORA40B-201ENST00000385573 128 ntBASIC-2.71□□□□□ -2.84
LIMD2Q9BT23 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.71□□□□□ -2.84
LIMD2Q9BT23 MTND4LP9-201ENST00000427694 174 ntBASIC-2.71□□□□□ -2.84
LIMD2Q9BT23 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.71□□□□□ -2.84
LIMD2Q9BT23 RNU6-789P-201ENST00000517105 102 ntBASIC-2.71□□□□□ -2.84
LIMD2Q9BT23 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.72□□□□□ -2.84
LIMD2Q9BT23 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.72□□□□□ -2.84
LIMD2Q9BT23 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.72□□□□□ -2.84
LIMD2Q9BT23 U6.95-201ENST00000636931 70 ntBASIC-2.72□□□□□ -2.84
LIMD2Q9BT23 SNORD60.1-201ENST00000362451 73 ntBASIC-2.73□□□□□ -2.85
LIMD2Q9BT23 RNU6-162P-201ENST00000516228 103 ntBASIC-2.73□□□□□ -2.85
LIMD2Q9BT23 RNU6-633P-201ENST00000362612 103 ntBASIC-2.74□□□□□ -2.85
LIMD2Q9BT23 SNORD45C-201ENST00000383893 79 ntBASIC-2.74□□□□□ -2.85
LIMD2Q9BT23 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.74□□□□□ -2.85
LIMD2Q9BT23 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.74□□□□□ -2.85
LIMD2Q9BT23 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.75□□□□□ -2.85
LIMD2Q9BT23 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.75□□□□□ -2.85
LIMD2Q9BT23 RNU6-402P-201ENST00000410678 103 ntBASIC-2.75□□□□□ -2.85
LIMD2Q9BT23 RNU7-107P-201ENST00000459121 61 ntBASIC-2.75□□□□□ -2.85
LIMD2Q9BT23 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.75□□□□□ -2.85
LIMD2Q9BT23 AC093729.1-201ENST00000513074 128 ntBASIC-2.75□□□□□ -2.85
LIMD2Q9BT23 AC062037.1-201ENST00000605302 128 ntBASIC-2.75□□□□□ -2.85
LIMD2Q9BT23 U7.3-201ENST00000616123 62 ntBASIC-2.75□□□□□ -2.85
LIMD2Q9BT23 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.76□□□□□ -2.85
LIMD2Q9BT23 SNORD33.1-201ENST00000516213 88 ntBASIC-2.76□□□□□ -2.85
LIMD2Q9BT23 MIR548AI-201ENST00000579940 88 ntBASIC-2.76□□□□□ -2.85
LIMD2Q9BT23 AC044792.1-201ENST00000593294 196 ntBASIC-2.76□□□□□ -2.85
LIMD2Q9BT23 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.77□□□□□ -2.85
LIMD2Q9BT23 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.77□□□□□ -2.85
LIMD2Q9BT23 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.77□□□□□ -2.85
LIMD2Q9BT23 RNU6-92P-201ENST00000605893 104 ntBASIC-2.77□□□□□ -2.85
LIMD2Q9BT23 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.78□□□□□ -2.85
LIMD2Q9BT23 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.78□□□□□ -2.85
LIMD2Q9BT23 RNU6-686P-201ENST00000364839 107 ntBASIC-2.78□□□□□ -2.85
LIMD2Q9BT23 SNORA40-201ENST00000388090 126 ntBASIC-2.78□□□□□ -2.85
LIMD2Q9BT23 MTCYBP9-201ENST00000431021 303 ntBASIC-2.78□□□□□ -2.85
LIMD2Q9BT23 RNU6-426P-201ENST00000516464 97 ntBASIC-2.78□□□□□ -2.85
LIMD2Q9BT23 RNU6-822P-201ENST00000362707 106 ntBASIC-2.79□□□□□ -2.86
LIMD2Q9BT23 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.79□□□□□ -2.86
LIMD2Q9BT23 RNU6-804P-201ENST00000384286 107 ntBASIC-2.79□□□□□ -2.86
LIMD2Q9BT23 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.79□□□□□ -2.86
LIMD2Q9BT23 MIR590-201ENST00000385008 97 ntBASIC-2.79□□□□□ -2.86
LIMD2Q9BT23 MIR1302-3-201ENST00000408128 138 ntBASIC-2.79□□□□□ -2.86
LIMD2Q9BT23 RNU6-196P-201ENST00000384315 107 ntBASIC-2.8□□□□□ -2.86
LIMD2Q9BT23 MIR8053-201ENST00000613344 75 ntBASIC-2.8□□□□□ -2.86
LIMD2Q9BT23 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.8□□□□□ -2.86
LIMD2Q9BT23 SNORD45.2-201ENST00000363552 72 ntBASIC-2.81□□□□□ -2.86
LIMD2Q9BT23 RNU6-659P-201ENST00000516454 104 ntBASIC-2.81□□□□□ -2.86
LIMD2Q9BT23 RNA5SP449-201ENST00000516871 130 ntBASIC-2.81□□□□□ -2.86
LIMD2Q9BT23 SNORA63.4-201ENST00000362763 126 ntBASIC-2.82□□□□□ -2.86
LIMD2Q9BT23 MIR545-201ENST00000385085 106 ntBASIC-2.82□□□□□ -2.86
LIMD2Q9BT23 MIR1297-201ENST00000637311 77 ntBASIC-2.82□□□□□ -2.86
LIMD2Q9BT23 MIR568-201ENST00000385036 95 ntBASIC-2.83□□□□□ -2.86
LIMD2Q9BT23 MIR1302-5-201ENST00000408164 150 ntBASIC-2.83□□□□□ -2.86
LIMD2Q9BT23 AC008737.2-201ENST00000599446 118 ntBASIC-2.83□□□□□ -2.86
LIMD2Q9BT23 RNU6-200P-201ENST00000364743 107 ntBASIC-2.84□□□□□ -2.86
LIMD2Q9BT23 Y_RNA.61-201ENST00000362835 102 ntBASIC-2.85□□□□□ -2.87
LIMD2Q9BT23 SNORD115.2-201ENST00000391126 59 ntBASIC-2.85□□□□□ -2.87
LIMD2Q9BT23 RNU6-836P-201ENST00000362920 107 ntBASIC-2.86□□□□□ -2.87
LIMD2Q9BT23 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.86□□□□□ -2.87
LIMD2Q9BT23 RNU6-257P-201ENST00000410238 98 ntBASIC-2.86□□□□□ -2.87
LIMD2Q9BT23 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.86□□□□□ -2.87
LIMD2Q9BT23 RNU6-419P-201ENST00000517030 63 ntBASIC-2.86□□□□□ -2.87
LIMD2Q9BT23 MIR4668-201ENST00000582284 70 ntBASIC-2.86□□□□□ -2.87
LIMD2Q9BT23 MIR4801-201ENST00000582704 82 ntBASIC-2.87□□□□□ -2.87
LIMD2Q9BT23 AC004792.1-201ENST00000614523 137 ntBASIC-2.87□□□□□ -2.87
LIMD2Q9BT23 SNORD116-21-201ENST00000384507 92 ntBASIC-2.88□□□□□ -2.87
LIMD2Q9BT23 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.89□□□□□ -2.87
LIMD2Q9BT23 RNU6-497P-201ENST00000365316 104 ntBASIC-2.89□□□□□ -2.87
LIMD2Q9BT23 MIR606-201ENST00000384851 96 ntBASIC-2.89□□□□□ -2.87
LIMD2Q9BT23 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.9□□□□□ -2.87
LIMD2Q9BT23 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.9□□□□□ -2.87
LIMD2Q9BT23 RNU6-542P-201ENST00000516405 103 ntBASIC-2.9□□□□□ -2.87
LIMD2Q9BT23 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.9□□□□□ -2.87
LIMD2Q9BT23 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.9□□□□□ -2.87
LIMD2Q9BT23 RNU6-109P-201ENST00000516364 107 ntBASIC-2.91□□□□□ -2.88
LIMD2Q9BT23 RNU6-184P-201ENST00000516514 107 ntBASIC-2.91□□□□□ -2.88
LIMD2Q9BT23 RNU6-267P-201ENST00000516714 103 ntBASIC-2.91□□□□□ -2.88
LIMD2Q9BT23 MTND5P41-201ENST00000517498 206 ntBASIC-2.91□□□□□ -2.88
LIMD2Q9BT23 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.91□□□□□ -2.88
LIMD2Q9BT23 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.93□□□□□ -2.88
LIMD2Q9BT23 RNU6-738P-201ENST00000384531 106 ntBASIC-2.93□□□□□ -2.88
LIMD2Q9BT23 RNU6-422P-201ENST00000384632 107 ntBASIC-2.93□□□□□ -2.88
LIMD2Q9BT23 MIR548H4-201ENST00000408689 111 ntBASIC-2.93□□□□□ -2.88
LIMD2Q9BT23 AL353621.2-201ENST00000605340 133 ntBASIC-2.93□□□□□ -2.88
LIMD2Q9BT23 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.94□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms