Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU7-151P-201ENST00000516930 53 ntBASIC-1.07□□□□□ -2.58
LINC00477Q96M19 MIR7978-201ENST00000636158 59 ntBASIC-1.07□□□□□ -2.58
LINC00477Q96M19 MIR1246-201ENST00000636535 73 ntBASIC-1.07□□□□□ -2.58
LINC00477Q96M19 RNU6-576P-201ENST00000390854 102 ntBASIC-1.08□□□□□ -2.58
LINC00477Q96M19 RNU6-172P-201ENST00000411000 93 ntBASIC-1.08□□□□□ -2.58
LINC00477Q96M19 MIR429-201ENST00000362106 83 ntBASIC-1.09□□□□□ -2.58
LINC00477Q96M19 RNU6-857P-201ENST00000515893 110 ntBASIC-1.09□□□□□ -2.58
LINC00477Q96M19 U7.4-201ENST00000614961 63 ntBASIC-1.09□□□□□ -2.58
LINC00477Q96M19 RNU6-563P-201ENST00000364872 108 ntBASIC-1.1□□□□□ -2.59
LINC00477Q96M19 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.1□□□□□ -2.59
LINC00477Q96M19 MIR548AA1-201ENST00000384971 97 ntBASIC-1.1□□□□□ -2.59
LINC00477Q96M19 RNU6-634P-201ENST00000459134 106 ntBASIC-1.1□□□□□ -2.59
LINC00477Q96M19 MIR4520-1-201ENST00000582609 70 ntBASIC-1.1□□□□□ -2.59
LINC00477Q96M19 SNORD60.1-201ENST00000362451 73 ntBASIC-1.11□□□□□ -2.59
LINC00477Q96M19 SNORA26.2-201ENST00000390922 122 ntBASIC-1.11□□□□□ -2.59
LINC00477Q96M19 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.12□□□□□ -2.59
LINC00477Q96M19 RNA5SP86-201ENST00000390869 98 ntBASIC-1.12□□□□□ -2.59
LINC00477Q96M19 MIR1285-2-201ENST00000408311 88 ntBASIC-1.12□□□□□ -2.59
LINC00477Q96M19 RNU6-542P-201ENST00000516405 103 ntBASIC-1.12□□□□□ -2.59
LINC00477Q96M19 RNU6-92P-201ENST00000605893 104 ntBASIC-1.12□□□□□ -2.59
LINC00477Q96M19 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.13□□□□□ -2.59
LINC00477Q96M19 RNU6-663P-201ENST00000391105 106 ntBASIC-1.13□□□□□ -2.59
LINC00477Q96M19 MIR4679-1-201ENST00000637619 75 ntBASIC-1.13□□□□□ -2.59
LINC00477Q96M19 RNU6-669P-201ENST00000365575 107 ntBASIC-1.14□□□□□ -2.59
LINC00477Q96M19 MIR125B1-201ENST00000385236 88 ntBASIC-1.14□□□□□ -2.59
LINC00477Q96M19 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.14□□□□□ -2.59
LINC00477Q96M19 RNU6-279P-201ENST00000391297 101 ntBASIC-1.14□□□□□ -2.59
LINC00477Q96M19 U4.2-201ENST00000618561 85 ntBASIC-1.14□□□□□ -2.59
LINC00477Q96M19 MIR3202-2-201ENST00000635980 79 ntBASIC-1.14□□□□□ -2.59
LINC00477Q96M19 RNU6-79P-201ENST00000362511 107 ntBASIC-1.15□□□□□ -2.59
LINC00477Q96M19 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.15□□□□□ -2.59
LINC00477Q96M19 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.15□□□□□ -2.59
LINC00477Q96M19 RNU6-983P-201ENST00000516004 103 ntBASIC-1.15□□□□□ -2.59
LINC00477Q96M19 SNORD63.2-201ENST00000516303 64 ntBASIC-1.15□□□□□ -2.59
LINC00477Q96M19 MIR4441-201ENST00000582623 100 ntBASIC-1.15□□□□□ -2.59
LINC00477Q96M19 AC005520.4-201ENST00000604337 90 ntBASIC-1.15□□□□□ -2.59
LINC00477Q96M19 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.15□□□□□ -2.59
LINC00477Q96M19 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.15□□□□□ -2.59
LINC00477Q96M19 MIR365A-201ENST00000362260 87 ntBASIC-1.16□□□□□ -2.6
LINC00477Q96M19 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.16□□□□□ -2.6
LINC00477Q96M19 RNU6-247P-201ENST00000362636 107 ntBASIC-1.17□□□□□ -2.6
LINC00477Q96M19 AC018880.2-201ENST00000414265 201 ntBASIC-1.17□□□□□ -2.6
LINC00477Q96M19 AC120024.2-201ENST00000576526 175 ntBASIC-1.17□□□□□ -2.6
LINC00477Q96M19 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.18□□□□□ -2.6
LINC00477Q96M19 SNORD18.1-201ENST00000363807 70 ntBASIC-1.18□□□□□ -2.6
LINC00477Q96M19 SNORD78.1-201ENST00000390866 65 ntBASIC-1.18□□□□□ -2.6
LINC00477Q96M19 AC013734.1-201ENST00000619329 111 ntBASIC-1.18□□□□□ -2.6
LINC00477Q96M19 RNU6-810P-201ENST00000364001 107 ntBASIC-1.19□□□□□ -2.6
LINC00477Q96M19 SNORD30.1-201ENST00000391309 70 ntBASIC-1.19□□□□□ -2.6
LINC00477Q96M19 RNU6-231P-201ENST00000517122 103 ntBASIC-1.19□□□□□ -2.6
LINC00477Q96M19 MIR548H1-201ENST00000408610 102 ntBASIC-1.2□□□□□ -2.6
LINC00477Q96M19 RNY3P8-201ENST00000411366 126 ntBASIC-1.2□□□□□ -2.6
LINC00477Q96M19 RNU6-995P-201ENST00000391244 107 ntBASIC-1.21□□□□□ -2.6
LINC00477Q96M19 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.21□□□□□ -2.6
LINC00477Q96M19 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.22□□□□□ -2.6
LINC00477Q96M19 SNORA25.4-201ENST00000363666 124 ntBASIC-1.22□□□□□ -2.6
LINC00477Q96M19 SNORA25.5-201ENST00000363782 126 ntBASIC-1.22□□□□□ -2.6
LINC00477Q96M19 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.22□□□□□ -2.6
LINC00477Q96M19 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.22□□□□□ -2.6
LINC00477Q96M19 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.22□□□□□ -2.6
LINC00477Q96M19 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.22□□□□□ -2.6
LINC00477Q96M19 SNORD114-3-201ENST00000364969 75 ntBASIC-1.23□□□□□ -2.61
LINC00477Q96M19 SNORD116.2-201ENST00000391251 93 ntBASIC-1.23□□□□□ -2.61
LINC00477Q96M19 SNORA40.16-201ENST00000517238 121 ntBASIC-1.23□□□□□ -2.61
LINC00477Q96M19 MIR7110-201ENST00000612638 86 ntBASIC-1.23□□□□□ -2.61
LINC00477Q96M19 U6.111-201ENST00000636093 83 ntBASIC-1.23□□□□□ -2.61
LINC00477Q96M19 RNU6-122P-201ENST00000516818 107 ntBASIC-1.24□□□□□ -2.61
LINC00477Q96M19 MIR4723-201ENST00000585070 81 ntBASIC-1.24□□□□□ -2.61
LINC00477Q96M19 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.24□□□□□ -2.61
LINC00477Q96M19 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.25□□□□□ -2.61
LINC00477Q96M19 MIR487B-201ENST00000385021 84 ntBASIC-1.25□□□□□ -2.61
LINC00477Q96M19 SNORA27.2-201ENST00000363365 126 ntBASIC-1.26□□□□□ -2.61
LINC00477Q96M19 RNU6-649P-201ENST00000384463 107 ntBASIC-1.26□□□□□ -2.61
LINC00477Q96M19 MIR4511-201ENST00000582784 87 ntBASIC-1.26□□□□□ -2.61
LINC00477Q96M19 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.27□□□□□ -2.61
LINC00477Q96M19 U6.97-201ENST00000636904 101 ntBASIC-1.27□□□□□ -2.61
LINC00477Q96M19 RNU6-400P-201ENST00000391173 106 ntBASIC-1.28□□□□□ -2.61
LINC00477Q96M19 AC108019.1-201ENST00000512540 175 ntBASIC-1.28□□□□□ -2.61
LINC00477Q96M19 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.28□□□□□ -2.61
LINC00477Q96M19 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.29□□□□□ -2.62
LINC00477Q96M19 MIR664B-201ENST00000626756 61 ntBASIC-1.29□□□□□ -2.62
LINC00477Q96M19 RNU6-776P-201ENST00000364403 104 ntBASIC-1.3□□□□□ -2.62
LINC00477Q96M19 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.3□□□□□ -2.62
LINC00477Q96M19 MIR581-201ENST00000384895 96 ntBASIC-1.3□□□□□ -2.62
LINC00477Q96M19 SNORA40B-201ENST00000385573 128 ntBASIC-1.3□□□□□ -2.62
LINC00477Q96M19 MIR1302-4-201ENST00000408701 150 ntBASIC-1.3□□□□□ -2.62
LINC00477Q96M19 RNY4P27-201ENST00000363341 96 ntBASIC-1.31□□□□□ -2.62
LINC00477Q96M19 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.31□□□□□ -2.62
LINC00477Q96M19 RNU6-800P-201ENST00000384473 103 ntBASIC-1.31□□□□□ -2.62
LINC00477Q96M19 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.31□□□□□ -2.62
LINC00477Q96M19 MIR1207-201ENST00000408249 87 ntBASIC-1.31□□□□□ -2.62
LINC00477Q96M19 RNU6-871P-201ENST00000516122 100 ntBASIC-1.31□□□□□ -2.62
LINC00477Q96M19 RNU7-160P-201ENST00000516660 62 ntBASIC-1.31□□□□□ -2.62
LINC00477Q96M19 RNU6-539P-201ENST00000516665 103 ntBASIC-1.31□□□□□ -2.62
LINC00477Q96M19 MIR4756-201ENST00000577874 78 ntBASIC-1.31□□□□□ -2.62
LINC00477Q96M19 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
LINC00477Q96M19 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.32□□□□□ -2.62
LINC00477Q96M19 MIR23C-201ENST00000579846 100 ntBASIC-1.32□□□□□ -2.62
LINC00477Q96M19 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.33□□□□□ -2.62
LINC00477Q96M19 RNU6-520P-201ENST00000384717 104 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms