Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MIR6818-201ENST00000621576 65 ntBASIC-0.9□□□□□ -2.55
PDLIM5Q96HC4 RNU6-638P-201ENST00000516582 104 ntBASIC-0.91□□□□□ -2.56
PDLIM5Q96HC4 RNU6-122P-201ENST00000516818 107 ntBASIC-0.91□□□□□ -2.56
PDLIM5Q96HC4 uc_338.19-201ENST00000616808 99 ntBASIC-0.91□□□□□ -2.56
PDLIM5Q96HC4 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.92□□□□□ -2.56
PDLIM5Q96HC4 MIR7978-201ENST00000636158 59 ntBASIC-0.92□□□□□ -2.56
PDLIM5Q96HC4 RNU6-608P-201ENST00000383927 104 ntBASIC-0.93□□□□□ -2.56
PDLIM5Q96HC4 MIR3115-201ENST00000577915 68 ntBASIC-0.93□□□□□ -2.56
PDLIM5Q96HC4 MIR4320-201ENST00000636981 65 ntBASIC-0.93□□□□□ -2.56
PDLIM5Q96HC4 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.94□□□□□ -2.56
PDLIM5Q96HC4 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.94□□□□□ -2.56
PDLIM5Q96HC4 RPL35AP4-201ENST00000412007 102 ntBASIC-0.94□□□□□ -2.56
PDLIM5Q96HC4 SNX3P1X-201ENST00000414887 175 ntBASIC-0.94□□□□□ -2.56
PDLIM5Q96HC4 AC090616.4-201ENST00000448026 115 ntBASIC-0.94□□□□□ -2.56
PDLIM5Q96HC4 AC114801.3-201ENST00000510231 177 ntBASIC-0.94□□□□□ -2.56
PDLIM5Q96HC4 MIR579-201ENST00000385221 98 ntBASIC-0.95□□□□□ -2.56
PDLIM5Q96HC4 RNU7-134P-201ENST00000458997 64 ntBASIC-0.96□□□□□ -2.56
PDLIM5Q96HC4 RNU6-940P-201ENST00000363433 104 ntBASIC-0.97□□□□□ -2.56
PDLIM5Q96HC4 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.97□□□□□ -2.56
PDLIM5Q96HC4 MIR125B1-201ENST00000385236 88 ntBASIC-0.97□□□□□ -2.56
PDLIM5Q96HC4 RNU6-995P-201ENST00000391244 107 ntBASIC-0.97□□□□□ -2.56
PDLIM5Q96HC4 AC110620.1-201ENST00000416042 228 ntBASIC-0.97□□□□□ -2.56
PDLIM5Q96HC4 RNA5SP461-201ENST00000516451 104 ntBASIC-0.97□□□□□ -2.56
PDLIM5Q96HC4 RNU6-231P-201ENST00000517122 103 ntBASIC-0.97□□□□□ -2.56
PDLIM5Q96HC4 MIR7110-201ENST00000612638 86 ntBASIC-0.97□□□□□ -2.56
PDLIM5Q96HC4 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.97□□□□□ -2.56
PDLIM5Q96HC4 RNU6-471P-201ENST00000383944 106 ntBASIC-0.98□□□□□ -2.57
PDLIM5Q96HC4 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.98□□□□□ -2.57
PDLIM5Q96HC4 RNU6-258P-201ENST00000390884 101 ntBASIC-0.99□□□□□ -2.57
PDLIM5Q96HC4 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.99□□□□□ -2.57
PDLIM5Q96HC4 RNU6-810P-201ENST00000364001 107 ntBASIC-1.01□□□□□ -2.57
PDLIM5Q96HC4 RNU6-164P-201ENST00000364604 103 ntBASIC-1.01□□□□□ -2.57
PDLIM5Q96HC4 RNU6-669P-201ENST00000365575 107 ntBASIC-1.01□□□□□ -2.57
PDLIM5Q96HC4 RNU7-160P-201ENST00000516660 62 ntBASIC-1.01□□□□□ -2.57
PDLIM5Q96HC4 MIR466-201ENST00000580653 84 ntBASIC-1.01□□□□□ -2.57
PDLIM5Q96HC4 MIR4306-201ENST00000583390 91 ntBASIC-1.01□□□□□ -2.57
PDLIM5Q96HC4 SNORD116.2-201ENST00000391251 93 ntBASIC-1.02□□□□□ -2.57
PDLIM5Q96HC4 MIR3938-201ENST00000582157 103 ntBASIC-1.02□□□□□ -2.57
PDLIM5Q96HC4 RNU6-247P-201ENST00000362636 107 ntBASIC-1.03□□□□□ -2.57
PDLIM5Q96HC4 MIR1468-201ENST00000410600 86 ntBASIC-1.03□□□□□ -2.57
PDLIM5Q96HC4 RNU6-974P-201ENST00000384099 108 ntBASIC-1.04□□□□□ -2.58
PDLIM5Q96HC4 RNU6-576P-201ENST00000390854 102 ntBASIC-1.04□□□□□ -2.58
PDLIM5Q96HC4 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.04□□□□□ -2.58
PDLIM5Q96HC4 MIR601-201ENST00000385256 79 ntBASIC-1.05□□□□□ -2.58
PDLIM5Q96HC4 RNU7-119P-201ENST00000459279 63 ntBASIC-1.05□□□□□ -2.58
PDLIM5Q96HC4 SNORD63.2-201ENST00000516303 64 ntBASIC-1.05□□□□□ -2.58
PDLIM5Q96HC4 SNORA40.16-201ENST00000517238 121 ntBASIC-1.05□□□□□ -2.58
PDLIM5Q96HC4 MIR3165-201ENST00000579874 75 ntBASIC-1.05□□□□□ -2.58
PDLIM5Q96HC4 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.06□□□□□ -2.58
PDLIM5Q96HC4 SNORA40B-201ENST00000385573 128 ntBASIC-1.06□□□□□ -2.58
PDLIM5Q96HC4 MIR23C-201ENST00000579846 100 ntBASIC-1.06□□□□□ -2.58
PDLIM5Q96HC4 MIR198-201ENST00000637333 62 ntBASIC-1.06□□□□□ -2.58
PDLIM5Q96HC4 SNORA27.2-201ENST00000363365 126 ntBASIC-1.07□□□□□ -2.58
PDLIM5Q96HC4 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.08□□□□□ -2.58
PDLIM5Q96HC4 AC091912.2-201ENST00000624798 167 ntBASIC-1.08□□□□□ -2.58
PDLIM5Q96HC4 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.09□□□□□ -2.58
PDLIM5Q96HC4 RNU6-520P-201ENST00000384717 104 ntBASIC-1.09□□□□□ -2.58
PDLIM5Q96HC4 RNU6-79P-201ENST00000362511 107 ntBASIC-1.1□□□□□ -2.59
PDLIM5Q96HC4 AC018880.2-201ENST00000414265 201 ntBASIC-1.1□□□□□ -2.59
PDLIM5Q96HC4 MIR6874-201ENST00000635894 71 ntBASIC-1.1□□□□□ -2.59
PDLIM5Q96HC4 RNU6-828P-201ENST00000364876 107 ntBASIC-1.11□□□□□ -2.59
PDLIM5Q96HC4 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.11□□□□□ -2.59
PDLIM5Q96HC4 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.11□□□□□ -2.59
PDLIM5Q96HC4 RNU6-226P-201ENST00000363778 107 ntBASIC-1.12□□□□□ -2.59
PDLIM5Q96HC4 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.12□□□□□ -2.59
PDLIM5Q96HC4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.12□□□□□ -2.59
PDLIM5Q96HC4 RNU6-590P-201ENST00000365039 107 ntBASIC-1.13□□□□□ -2.59
PDLIM5Q96HC4 MIR8485-201ENST00000401372 91 ntBASIC-1.13□□□□□ -2.59
PDLIM5Q96HC4 RNU6-706P-201ENST00000517229 104 ntBASIC-1.13□□□□□ -2.59
PDLIM5Q96HC4 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.13□□□□□ -2.59
PDLIM5Q96HC4 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.14□□□□□ -2.59
PDLIM5Q96HC4 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.15□□□□□ -2.59
PDLIM5Q96HC4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
PDLIM5Q96HC4 AC120024.2-201ENST00000576526 175 ntBASIC-1.15□□□□□ -2.59
PDLIM5Q96HC4 RNU6-446P-201ENST00000362827 106 ntBASIC-1.17□□□□□ -2.6
PDLIM5Q96HC4 RNU6-563P-201ENST00000364872 108 ntBASIC-1.17□□□□□ -2.6
PDLIM5Q96HC4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
PDLIM5Q96HC4 AC138207.3-201ENST00000585289 166 ntBASIC-1.18□□□□□ -2.6
PDLIM5Q96HC4 MIR6502-201ENST00000617296 76 ntBASIC-1.18□□□□□ -2.6
PDLIM5Q96HC4 U4.2-201ENST00000618561 85 ntBASIC-1.18□□□□□ -2.6
PDLIM5Q96HC4 HLA-S-202ENST00000425174 53 ntBASIC-1.19□□□□□ -2.6
PDLIM5Q96HC4 RNA5SP180-201ENST00000516181 101 ntBASIC-1.19□□□□□ -2.6
PDLIM5Q96HC4 MIR4723-201ENST00000585070 81 ntBASIC-1.19□□□□□ -2.6
PDLIM5Q96HC4 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.2□□□□□ -2.6
PDLIM5Q96HC4 RNY3P8-201ENST00000411366 126 ntBASIC-1.2□□□□□ -2.6
PDLIM5Q96HC4 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.2□□□□□ -2.6
PDLIM5Q96HC4 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.2□□□□□ -2.6
PDLIM5Q96HC4 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.2□□□□□ -2.6
PDLIM5Q96HC4 AC013734.1-201ENST00000619329 111 ntBASIC-1.2□□□□□ -2.6
PDLIM5Q96HC4 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.2□□□□□ -2.6
PDLIM5Q96HC4 MIR365A-201ENST00000362260 87 ntBASIC-1.21□□□□□ -2.6
PDLIM5Q96HC4 MIR1285-2-201ENST00000408311 88 ntBASIC-1.21□□□□□ -2.6
PDLIM5Q96HC4 AC125388.1-201ENST00000459631 156 ntBASIC-1.21□□□□□ -2.6
PDLIM5Q96HC4 AC139453.2-201ENST00000487255 133 ntBASIC-1.21□□□□□ -2.6
PDLIM5Q96HC4 RNU6-419P-201ENST00000517030 63 ntBASIC-1.21□□□□□ -2.6
PDLIM5Q96HC4 RNU6-400P-201ENST00000391173 106 ntBASIC-1.22□□□□□ -2.6
PDLIM5Q96HC4 AL451105.1-201ENST00000450005 189 ntBASIC-1.22□□□□□ -2.6
PDLIM5Q96HC4 MIR1246-201ENST00000636535 73 ntBASIC-1.23□□□□□ -2.61
PDLIM5Q96HC4 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.24□□□□□ -2.61
PDLIM5Q96HC4 MIR5591-201ENST00000578248 65 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms