Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 RNU6-361P-201ENST00000364454 107 ntBASIC-1.4□□□□□ -2.63
RPUSD3Q6P087 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.4□□□□□ -2.63
RPUSD3Q6P087 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.4□□□□□ -2.63
RPUSD3Q6P087 RNU6-959P-201ENST00000384671 107 ntBASIC-1.4□□□□□ -2.63
RPUSD3Q6P087 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.4□□□□□ -2.63
RPUSD3Q6P087 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.4□□□□□ -2.63
RPUSD3Q6P087 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.4□□□□□ -2.63
RPUSD3Q6P087 RNU6-668P-201ENST00000364180 107 ntBASIC-1.41□□□□□ -2.64
RPUSD3Q6P087 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.41□□□□□ -2.64
RPUSD3Q6P087 RNU6-649P-201ENST00000384463 107 ntBASIC-1.41□□□□□ -2.64
RPUSD3Q6P087 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.41□□□□□ -2.64
RPUSD3Q6P087 RNU6-834P-201ENST00000362367 110 ntBASIC-1.42□□□□□ -2.64
RPUSD3Q6P087 SNORD114-3-201ENST00000364969 75 ntBASIC-1.42□□□□□ -2.64
RPUSD3Q6P087 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
RPUSD3Q6P087 SNORA17.4-201ENST00000391287 132 ntBASIC-1.42□□□□□ -2.64
RPUSD3Q6P087 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.42□□□□□ -2.64
RPUSD3Q6P087 RNU7-160P-201ENST00000516660 62 ntBASIC-1.42□□□□□ -2.64
RPUSD3Q6P087 SNORA40.16-201ENST00000517238 121 ntBASIC-1.42□□□□□ -2.64
RPUSD3Q6P087 MIR548AI-201ENST00000579940 88 ntBASIC-1.42□□□□□ -2.64
RPUSD3Q6P087 AC006160.2-201ENST00000637708 154 ntBASIC-1.42□□□□□ -2.64
RPUSD3Q6P087 RNU6-810P-201ENST00000364001 107 ntBASIC-1.43□□□□□ -2.64
RPUSD3Q6P087 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.43□□□□□ -2.64
RPUSD3Q6P087 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.43□□□□□ -2.64
RPUSD3Q6P087 RNU6-675P-201ENST00000384236 104 ntBASIC-1.43□□□□□ -2.64
RPUSD3Q6P087 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.43□□□□□ -2.64
RPUSD3Q6P087 RNU6-129P-201ENST00000391022 107 ntBASIC-1.43□□□□□ -2.64
RPUSD3Q6P087 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.43□□□□□ -2.64
RPUSD3Q6P087 MTND4LP1-201ENST00000446263 157 ntBASIC-1.43□□□□□ -2.64
RPUSD3Q6P087 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.43□□□□□ -2.64
RPUSD3Q6P087 SNORD60.1-201ENST00000362451 73 ntBASIC-1.44□□□□□ -2.64
RPUSD3Q6P087 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.44□□□□□ -2.64
RPUSD3Q6P087 MIR488-201ENST00000365739 83 ntBASIC-1.44□□□□□ -2.64
RPUSD3Q6P087 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
RPUSD3Q6P087 SNORA63.4-201ENST00000362763 126 ntBASIC-1.45□□□□□ -2.64
RPUSD3Q6P087 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.45□□□□□ -2.64
RPUSD3Q6P087 SNORD54-201ENST00000459159 67 ntBASIC-1.45□□□□□ -2.64
RPUSD3Q6P087 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.45□□□□□ -2.64
RPUSD3Q6P087 RNU6-231P-201ENST00000517122 103 ntBASIC-1.45□□□□□ -2.64
RPUSD3Q6P087 MIR8053-201ENST00000613344 75 ntBASIC-1.45□□□□□ -2.64
RPUSD3Q6P087 RNU6-828P-201ENST00000364876 107 ntBASIC-1.46□□□□□ -2.64
RPUSD3Q6P087 RNU6-119P-201ENST00000364882 107 ntBASIC-1.46□□□□□ -2.64
RPUSD3Q6P087 SNORD60-201ENST00000383903 83 ntBASIC-1.46□□□□□ -2.64
RPUSD3Q6P087 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.46□□□□□ -2.64
RPUSD3Q6P087 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.46□□□□□ -2.64
RPUSD3Q6P087 MIR1254-1-201ENST00000408257 97 ntBASIC-1.46□□□□□ -2.64
RPUSD3Q6P087 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.46□□□□□ -2.64
RPUSD3Q6P087 RNY4P9-201ENST00000363194 97 ntBASIC-1.47□□□□□ -2.64
RPUSD3Q6P087 SNORD115-37-201ENST00000363768 82 ntBASIC-1.47□□□□□ -2.64
RPUSD3Q6P087 RNU6-742P-201ENST00000365289 107 ntBASIC-1.48□□□□□ -2.65
RPUSD3Q6P087 RNU6-589P-201ENST00000516485 107 ntBASIC-1.48□□□□□ -2.65
RPUSD3Q6P087 MIR5693-201ENST00000577722 73 ntBASIC-1.48□□□□□ -2.65
RPUSD3Q6P087 AL731768.1-201ENST00000603124 139 ntBASIC-1.48□□□□□ -2.65
RPUSD3Q6P087 MALAT1.1-201ENST00000618249 95 ntBASIC-1.48□□□□□ -2.65
RPUSD3Q6P087 MIR1297-201ENST00000637311 77 ntBASIC-1.48□□□□□ -2.65
RPUSD3Q6P087 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.49□□□□□ -2.65
RPUSD3Q6P087 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.49□□□□□ -2.65
RPUSD3Q6P087 RNA5SP173-201ENST00000364857 136 ntBASIC-1.49□□□□□ -2.65
RPUSD3Q6P087 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.49□□□□□ -2.65
RPUSD3Q6P087 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.49□□□□□ -2.65
RPUSD3Q6P087 SNORA40B-201ENST00000385573 128 ntBASIC-1.49□□□□□ -2.65
RPUSD3Q6P087 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.49□□□□□ -2.65
RPUSD3Q6P087 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.49□□□□□ -2.65
RPUSD3Q6P087 RNU6-92P-201ENST00000605893 104 ntBASIC-1.49□□□□□ -2.65
RPUSD3Q6P087 MIR7110-201ENST00000612638 86 ntBASIC-1.49□□□□□ -2.65
RPUSD3Q6P087 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.49□□□□□ -2.65
RPUSD3Q6P087 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.5□□□□□ -2.65
RPUSD3Q6P087 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.5□□□□□ -2.65
RPUSD3Q6P087 RNU6-789P-201ENST00000517105 102 ntBASIC-1.5□□□□□ -2.65
RPUSD3Q6P087 MIR4426-201ENST00000640330 63 ntBASIC-1.5□□□□□ -2.65
RPUSD3Q6P087 RNU6-230P-201ENST00000362457 104 ntBASIC-1.51□□□□□ -2.65
RPUSD3Q6P087 RNU6-640P-201ENST00000363693 105 ntBASIC-1.51□□□□□ -2.65
RPUSD3Q6P087 RNU6-755P-201ENST00000364400 103 ntBASIC-1.51□□□□□ -2.65
RPUSD3Q6P087 RNU6-590P-201ENST00000365039 107 ntBASIC-1.51□□□□□ -2.65
RPUSD3Q6P087 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.51□□□□□ -2.65
RPUSD3Q6P087 SNORD116-22-201ENST00000384430 92 ntBASIC-1.51□□□□□ -2.65
RPUSD3Q6P087 RNU6-687P-201ENST00000516443 89 ntBASIC-1.51□□□□□ -2.65
RPUSD3Q6P087 MIR2052-201ENST00000636055 55 ntBASIC-1.51□□□□□ -2.65
RPUSD3Q6P087 RNU6-315P-201ENST00000362666 107 ntBASIC-1.52□□□□□ -2.65
RPUSD3Q6P087 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.52□□□□□ -2.65
RPUSD3Q6P087 RNU6-81P-201ENST00000365608 104 ntBASIC-1.52□□□□□ -2.65
RPUSD3Q6P087 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.52□□□□□ -2.65
RPUSD3Q6P087 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.52□□□□□ -2.65
RPUSD3Q6P087 AL451105.1-201ENST00000450005 189 ntBASIC-1.52□□□□□ -2.65
RPUSD3Q6P087 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.52□□□□□ -2.65
RPUSD3Q6P087 MIR3134-201ENST00000579433 74 ntBASIC-1.52□□□□□ -2.65
RPUSD3Q6P087 MIR4712-201ENST00000583750 82 ntBASIC-1.52□□□□□ -2.65
RPUSD3Q6P087 MIR379-201ENST00000362218 67 ntBASIC-1.53□□□□□ -2.65
RPUSD3Q6P087 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.53□□□□□ -2.65
RPUSD3Q6P087 RNU6-854P-201ENST00000364036 107 ntBASIC-1.53□□□□□ -2.65
RPUSD3Q6P087 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.53□□□□□ -2.65
RPUSD3Q6P087 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.53□□□□□ -2.65
RPUSD3Q6P087 SNORD116.2-201ENST00000391251 93 ntBASIC-1.53□□□□□ -2.65
RPUSD3Q6P087 MIR450A1-201ENST00000362262 91 ntBASIC-1.54□□□□□ -2.66
RPUSD3Q6P087 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.54□□□□□ -2.66
RPUSD3Q6P087 RNU6-800P-201ENST00000384473 103 ntBASIC-1.54□□□□□ -2.66
RPUSD3Q6P087 RNU6-542P-201ENST00000516405 103 ntBASIC-1.54□□□□□ -2.66
RPUSD3Q6P087 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.55□□□□□ -2.66
RPUSD3Q6P087 RNU6-979P-201ENST00000383896 107 ntBASIC-1.55□□□□□ -2.66
RPUSD3Q6P087 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.55□□□□□ -2.66
RPUSD3Q6P087 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms