Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 RNU6-523P-201ENST00000516304 54 ntBASIC-1.52□□□□□ -2.65
SMARCB1Q12824 SNORA27.2-201ENST00000363365 126 ntBASIC-1.53□□□□□ -2.65
SMARCB1Q12824 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.53□□□□□ -2.65
SMARCB1Q12824 RNU6-411P-201ENST00000384451 107 ntBASIC-1.53□□□□□ -2.65
SMARCB1Q12824 RNU6-695P-201ENST00000391157 104 ntBASIC-1.53□□□□□ -2.65
SMARCB1Q12824 MIR548H1-201ENST00000408610 102 ntBASIC-1.53□□□□□ -2.65
SMARCB1Q12824 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.54□□□□□ -2.66
SMARCB1Q12824 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.54□□□□□ -2.66
SMARCB1Q12824 RNY3P8-201ENST00000411366 126 ntBASIC-1.54□□□□□ -2.66
SMARCB1Q12824 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.55□□□□□ -2.66
SMARCB1Q12824 RNA5SP331-201ENST00000364986 107 ntBASIC-1.55□□□□□ -2.66
SMARCB1Q12824 RNU6-820P-201ENST00000384273 107 ntBASIC-1.55□□□□□ -2.66
SMARCB1Q12824 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.56□□□□□ -2.66
SMARCB1Q12824 RNU6-634P-201ENST00000459134 106 ntBASIC-1.56□□□□□ -2.66
SMARCB1Q12824 U7.4-201ENST00000614961 63 ntBASIC-1.56□□□□□ -2.66
SMARCB1Q12824 MIR4320-201ENST00000636981 65 ntBASIC-1.56□□□□□ -2.66
SMARCB1Q12824 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.57□□□□□ -2.66
SMARCB1Q12824 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.58□□□□□ -2.66
SMARCB1Q12824 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.58□□□□□ -2.66
SMARCB1Q12824 RNU6-810P-201ENST00000364001 107 ntBASIC-1.58□□□□□ -2.66
SMARCB1Q12824 RNU6-663P-201ENST00000391105 106 ntBASIC-1.58□□□□□ -2.66
SMARCB1Q12824 MIR3123-201ENST00000583417 75 ntBASIC-1.58□□□□□ -2.66
SMARCB1Q12824 U6.97-201ENST00000636904 101 ntBASIC-1.58□□□□□ -2.66
SMARCB1Q12824 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.59□□□□□ -2.66
SMARCB1Q12824 MIR1468-201ENST00000410600 86 ntBASIC-1.59□□□□□ -2.66
SMARCB1Q12824 RNU6-231P-201ENST00000517122 103 ntBASIC-1.59□□□□□ -2.66
SMARCB1Q12824 MIR7110-201ENST00000612638 86 ntBASIC-1.59□□□□□ -2.66
SMARCB1Q12824 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.61□□□□□ -2.67
SMARCB1Q12824 RNU7-160P-201ENST00000516660 62 ntBASIC-1.61□□□□□ -2.67
SMARCB1Q12824 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.62□□□□□ -2.67
SMARCB1Q12824 SNORD116.2-201ENST00000391251 93 ntBASIC-1.62□□□□□ -2.67
SMARCB1Q12824 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.62□□□□□ -2.67
SMARCB1Q12824 RNU6-573P-201ENST00000383938 106 ntBASIC-1.63□□□□□ -2.67
SMARCB1Q12824 SNORA25.5-201ENST00000363782 126 ntBASIC-1.64□□□□□ -2.67
SMARCB1Q12824 SNORD73B-201ENST00000364394 72 ntBASIC-1.64□□□□□ -2.67
SMARCB1Q12824 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.64□□□□□ -2.67
SMARCB1Q12824 RNU6-228P-201ENST00000362700 106 ntBASIC-1.65□□□□□ -2.67
SMARCB1Q12824 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.65□□□□□ -2.67
SMARCB1Q12824 RNU6-841P-201ENST00000383872 107 ntBASIC-1.65□□□□□ -2.67
SMARCB1Q12824 MIR581-201ENST00000384895 96 ntBASIC-1.65□□□□□ -2.67
SMARCB1Q12824 RNU6-122P-201ENST00000516818 107 ntBASIC-1.65□□□□□ -2.67
SMARCB1Q12824 RNU6-828P-201ENST00000364876 107 ntBASIC-1.66□□□□□ -2.68
SMARCB1Q12824 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.66□□□□□ -2.68
SMARCB1Q12824 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.66□□□□□ -2.68
SMARCB1Q12824 RNU6-520P-201ENST00000384717 104 ntBASIC-1.66□□□□□ -2.68
SMARCB1Q12824 MIR1255A-201ENST00000408338 113 ntBASIC-1.66□□□□□ -2.68
SMARCB1Q12824 SNORA40.16-201ENST00000517238 121 ntBASIC-1.66□□□□□ -2.68
SMARCB1Q12824 MIR548AM-201ENST00000584298 74 ntBASIC-1.66□□□□□ -2.68
SMARCB1Q12824 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.66□□□□□ -2.68
SMARCB1Q12824 SNORA25.4-201ENST00000363666 124 ntBASIC-1.67□□□□□ -2.68
SMARCB1Q12824 SNORD18.1-201ENST00000363807 70 ntBASIC-1.67□□□□□ -2.68
SMARCB1Q12824 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.67□□□□□ -2.68
SMARCB1Q12824 SNORD30.1-201ENST00000391309 70 ntBASIC-1.67□□□□□ -2.68
SMARCB1Q12824 AC108019.1-201ENST00000512540 175 ntBASIC-1.67□□□□□ -2.68
SMARCB1Q12824 MIR202-201ENST00000362219 110 ntBASIC-1.68□□□□□ -2.68
SMARCB1Q12824 SNORA40B-201ENST00000385573 128 ntBASIC-1.68□□□□□ -2.68
SMARCB1Q12824 SNX3P1X-201ENST00000414887 175 ntBASIC-1.68□□□□□ -2.68
SMARCB1Q12824 RNU6-857P-201ENST00000515893 110 ntBASIC-1.68□□□□□ -2.68
SMARCB1Q12824 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.68□□□□□ -2.68
SMARCB1Q12824 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.68□□□□□ -2.68
SMARCB1Q12824 RNA5SP461-201ENST00000516451 104 ntBASIC-1.69□□□□□ -2.68
SMARCB1Q12824 MIR3202-2-201ENST00000635980 79 ntBASIC-1.69□□□□□ -2.68
SMARCB1Q12824 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.7□□□□□ -2.68
SMARCB1Q12824 RNY4P29-201ENST00000410801 97 ntBASIC-1.7□□□□□ -2.68
SMARCB1Q12824 RNA5SP170-201ENST00000517150 101 ntBASIC-1.7□□□□□ -2.68
SMARCB1Q12824 RNU6-649P-201ENST00000384463 107 ntBASIC-1.71□□□□□ -2.68
SMARCB1Q12824 MIR4756-201ENST00000577874 78 ntBASIC-1.71□□□□□ -2.68
SMARCB1Q12824 MIR548W-201ENST00000581970 74 ntBASIC-1.71□□□□□ -2.68
SMARCB1Q12824 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.72□□□□□ -2.68
SMARCB1Q12824 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.72□□□□□ -2.68
SMARCB1Q12824 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.72□□□□□ -2.68
SMARCB1Q12824 RNU6-279P-201ENST00000391297 101 ntBASIC-1.72□□□□□ -2.68
SMARCB1Q12824 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.73□□□□□ -2.69
SMARCB1Q12824 snoU13.10-201ENST00000459301 103 ntBASIC-1.73□□□□□ -2.69
SMARCB1Q12824 MIR4511-201ENST00000582784 87 ntBASIC-1.73□□□□□ -2.69
SMARCB1Q12824 U6.111-201ENST00000636093 83 ntBASIC-1.73□□□□□ -2.69
SMARCB1Q12824 SNORA26.2-201ENST00000390922 122 ntBASIC-1.74□□□□□ -2.69
SMARCB1Q12824 RNU4-88P-201ENST00000411220 86 ntBASIC-1.74□□□□□ -2.69
SMARCB1Q12824 SNORD18C-201ENST00000362704 69 ntBASIC-1.75□□□□□ -2.69
SMARCB1Q12824 MIR548N-201ENST00000408742 75 ntBASIC-1.75□□□□□ -2.69
SMARCB1Q12824 RNA5SP225-201ENST00000410874 135 ntBASIC-1.75□□□□□ -2.69
SMARCB1Q12824 RNU6-530P-201ENST00000391180 107 ntBASIC-1.76□□□□□ -2.69
SMARCB1Q12824 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.76□□□□□ -2.69
SMARCB1Q12824 MIR1246-201ENST00000636535 73 ntBASIC-1.76□□□□□ -2.69
SMARCB1Q12824 RNU6-361P-201ENST00000364454 107 ntBASIC-1.77□□□□□ -2.69
SMARCB1Q12824 SNORD60-201ENST00000383903 83 ntBASIC-1.77□□□□□ -2.69
SMARCB1Q12824 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
SMARCB1Q12824 SNORA17.4-201ENST00000391287 132 ntBASIC-1.77□□□□□ -2.69
SMARCB1Q12824 RNU7-119P-201ENST00000459279 63 ntBASIC-1.78□□□□□ -2.69
SMARCB1Q12824 RNU6-871P-201ENST00000516122 100 ntBASIC-1.78□□□□□ -2.69
SMARCB1Q12824 RNU6-539P-201ENST00000516665 103 ntBASIC-1.78□□□□□ -2.69
SMARCB1Q12824 RNU6-940P-201ENST00000363433 104 ntBASIC-1.79□□□□□ -2.7
SMARCB1Q12824 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.79□□□□□ -2.7
SMARCB1Q12824 RNU6-983P-201ENST00000516004 103 ntBASIC-1.79□□□□□ -2.7
SMARCB1Q12824 AC103706.3-201ENST00000636297 85 ntBASIC-1.79□□□□□ -2.7
SMARCB1Q12824 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.8□□□□□ -2.7
SMARCB1Q12824 SNORD78.1-201ENST00000390866 65 ntBASIC-1.8□□□□□ -2.7
SMARCB1Q12824 AL451105.1-201ENST00000450005 189 ntBASIC-1.8□□□□□ -2.7
SMARCB1Q12824 RNU6-980P-201ENST00000516925 103 ntBASIC-1.8□□□□□ -2.7
SMARCB1Q12824 MIR466-201ENST00000580653 84 ntBASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 223.2 ms