Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU6-380P-201ENST00000410207 107 ntBASIC-4.28□□□□□ -3.09
CLIP1P30622 RNU7-107P-201ENST00000459121 61 ntBASIC-4.28□□□□□ -3.09
CLIP1P30622 RNU6-419P-201ENST00000517030 63 ntBASIC-4.29□□□□□ -3.1
CLIP1P30622 MIR548BB-201ENST00000626714 66 ntBASIC-4.29□□□□□ -3.1
CLIP1P30622 Y_RNA.20-201ENST00000362479 113 ntBASIC-4.29□□□□□ -3.1
CLIP1P30622 RNU7-119P-201ENST00000459279 63 ntBASIC-4.29□□□□□ -3.1
CLIP1P30622 AC072026.1-201ENST00000605023 201 ntBASIC-4.29□□□□□ -3.1
CLIP1P30622 MIR154-201ENST00000385243 84 ntBASIC-4.3□□□□□ -3.1
CLIP1P30622 SNORD115.2-201ENST00000391126 59 ntBASIC-4.3□□□□□ -3.1
CLIP1P30622 Y_RNA.200-201ENST00000364018 102 ntBASIC-4.31□□□□□ -3.1
CLIP1P30622 RNU6-474P-201ENST00000384243 107 ntBASIC-4.31□□□□□ -3.1
CLIP1P30622 MIR569-201ENST00000385228 96 ntBASIC-4.31□□□□□ -3.1
CLIP1P30622 SNORD116-18-201ENST00000383961 92 ntBASIC-4.32□□□□□ -3.1
CLIP1P30622 RNU6-635P-201ENST00000516651 102 ntBASIC-4.32□□□□□ -3.1
CLIP1P30622 RNU6-497P-201ENST00000365316 104 ntBASIC-4.33□□□□□ -3.1
CLIP1P30622 RNU6-267P-201ENST00000516714 103 ntBASIC-4.33□□□□□ -3.1
CLIP1P30622 MIR3914-2-201ENST00000637339 95 ntBASIC-4.33□□□□□ -3.1
CLIP1P30622 RNU6-219P-201ENST00000364728 107 ntBASIC-4.35□□□□□ -3.11
CLIP1P30622 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.35□□□□□ -3.11
CLIP1P30622 Y_RNA.544-201ENST00000384650 113 ntBASIC-4.35□□□□□ -3.11
CLIP1P30622 RNU6-836P-201ENST00000362920 107 ntBASIC-4.36□□□□□ -3.11
CLIP1P30622 RNU6-985P-201ENST00000410182 104 ntBASIC-4.36□□□□□ -3.11
CLIP1P30622 SNORA19-201ENST00000384737 128 ntBASIC-4.37□□□□□ -3.11
CLIP1P30622 Y_RNA.580-201ENST00000391004 95 ntBASIC-4.37□□□□□ -3.11
CLIP1P30622 SNORD116-22-201ENST00000384430 92 ntBASIC-4.38□□□□□ -3.11
CLIP1P30622 MIR1302-5-201ENST00000408164 150 ntBASIC-4.38□□□□□ -3.11
CLIP1P30622 Y_RNA.611-201ENST00000410682 108 ntBASIC-4.38□□□□□ -3.11
CLIP1P30622 RNU6-122P-201ENST00000516818 107 ntBASIC-4.38□□□□□ -3.11
CLIP1P30622 Y_RNA.818-201ENST00000618813 71 ntBASIC-4.38□□□□□ -3.11
CLIP1P30622 SCARNA15.1-201ENST00000516384 125 ntBASIC-4.38□□□□□ -3.11
CLIP1P30622 Y_RNA.431-201ENST00000384086 102 ntBASIC-4.39□□□□□ -3.11
CLIP1P30622 MTND4LP9-201ENST00000427694 174 ntBASIC-4.39□□□□□ -3.11
CLIP1P30622 Y_RNA.662-201ENST00000516028 97 ntBASIC-4.39□□□□□ -3.11
CLIP1P30622 RNU6-70P-201ENST00000516438 60 ntBASIC-4.39□□□□□ -3.11
CLIP1P30622 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.4□□□□□ -3.11
CLIP1P30622 MIR4801-201ENST00000582704 82 ntBASIC-4.4□□□□□ -3.11
CLIP1P30622 MIR4317-201ENST00000637586 65 ntBASIC-4.4□□□□□ -3.11
CLIP1P30622 RNU6-111P-201ENST00000517179 105 ntBASIC-4.41□□□□□ -3.12
CLIP1P30622 Y_RNA.356-201ENST00000365475 113 ntBASIC-4.42□□□□□ -3.12
CLIP1P30622 RNU6-788P-201ENST00000390967 104 ntBASIC-4.42□□□□□ -3.12
CLIP1P30622 SNORA25.5-201ENST00000363782 126 ntBASIC-4.43□□□□□ -3.12
CLIP1P30622 U6.95-201ENST00000636931 70 ntBASIC-4.43□□□□□ -3.12
CLIP1P30622 RNU6-426P-201ENST00000516464 97 ntBASIC-4.44□□□□□ -3.12
CLIP1P30622 Y_RNA.318-201ENST00000365131 97 ntBASIC-4.45□□□□□ -3.12
CLIP1P30622 MTATP8P1-201ENST00000467115 207 ntBASIC-4.45□□□□□ -3.12
CLIP1P30622 Y_RNA.712-201ENST00000517011 92 ntBASIC-4.45□□□□□ -3.12
CLIP1P30622 RNU6-797P-201ENST00000363101 109 ntBASIC-4.46□□□□□ -3.12
CLIP1P30622 Y_RNA.216-201ENST00000364205 93 ntBASIC-4.46□□□□□ -3.12
CLIP1P30622 AC004792.1-201ENST00000614523 137 ntBASIC-4.46□□□□□ -3.12
CLIP1P30622 SNORD116-21-201ENST00000384507 92 ntBASIC-4.46□□□□□ -3.12
CLIP1P30622 RNU6-422P-201ENST00000384632 107 ntBASIC-4.46□□□□□ -3.12
CLIP1P30622 AC006160.2-201ENST00000637708 154 ntBASIC-4.46□□□□□ -3.12
CLIP1P30622 Y_RNA.478-201ENST00000384358 107 ntBASIC-4.47□□□□□ -3.13
CLIP1P30622 Y_RNA.574-201ENST00000384766 95 ntBASIC-4.48□□□□□ -3.13
CLIP1P30622 MIR3128-201ENST00000581957 66 ntBASIC-4.48□□□□□ -3.13
CLIP1P30622 MIR4795-201ENST00000584182 89 ntBASIC-4.48□□□□□ -3.13
CLIP1P30622 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-4.48□□□□□ -3.13
CLIP1P30622 RNU6-315P-201ENST00000362666 107 ntBASIC-4.49□□□□□ -3.13
CLIP1P30622 RNU6-394P-201ENST00000410735 107 ntBASIC-4.5□□□□□ -3.13
CLIP1P30622 AL589823.1-201ENST00000429577 183 ntBASIC-4.52□□□□□ -3.13
CLIP1P30622 MTND4P29-201ENST00000503122 1372 ntBASIC-4.53□□□□□ -3.13
CLIP1P30622 RNU6-804P-201ENST00000384286 107 ntBASIC-4.55□□□□□ -3.14
CLIP1P30622 SNORA40-201ENST00000388090 126 ntBASIC-4.55□□□□□ -3.14
CLIP1P30622 Y_RNA.350-201ENST00000365409 98 ntBASIC-4.55□□□□□ -3.14
CLIP1P30622 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-4.56□□□□□ -3.14
CLIP1P30622 Y_RNA.297-201ENST00000364950 91 ntBASIC-4.58□□□□□ -3.14
CLIP1P30622 MIR545-201ENST00000385085 106 ntBASIC-4.58□□□□□ -3.14
CLIP1P30622 RNU7-120P-201ENST00000459334 63 ntBASIC-4.58□□□□□ -3.14
CLIP1P30622 RNU6-687P-201ENST00000516443 89 ntBASIC-4.58□□□□□ -3.14
CLIP1P30622 AC134503.1-201ENST00000633048 54 ntBASIC-4.58□□□□□ -3.14
CLIP1P30622 RNU6-776P-201ENST00000364403 104 ntBASIC-4.59□□□□□ -3.14
CLIP1P30622 SNORA20.1-201ENST00000364790 130 ntBASIC-4.59□□□□□ -3.14
CLIP1P30622 RNU6-1022P-201ENST00000365049 104 ntBASIC-4.59□□□□□ -3.14
CLIP1P30622 RNU6-411P-201ENST00000384451 107 ntBASIC-4.6□□□□□ -3.15
CLIP1P30622 RNU6-1023P-201ENST00000516137 106 ntBASIC-4.6□□□□□ -3.15
CLIP1P30622 RNU6-875P-201ENST00000516488 106 ntBASIC-4.6□□□□□ -3.15
CLIP1P30622 MIR3171-201ENST00000584270 74 ntBASIC-4.6□□□□□ -3.15
CLIP1P30622 Y_RNA.788-201ENST00000622394 112 ntBASIC-4.6□□□□□ -3.15
CLIP1P30622 RNU6-257P-201ENST00000410238 98 ntBASIC-4.61□□□□□ -3.15
CLIP1P30622 Y_RNA.607-201ENST00000410597 98 ntBASIC-4.61□□□□□ -3.15
CLIP1P30622 MIR3134-201ENST00000579433 74 ntBASIC-4.61□□□□□ -3.15
CLIP1P30622 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.61□□□□□ -3.15
CLIP1P30622 MIR2052-201ENST00000636055 55 ntBASIC-4.61□□□□□ -3.15
CLIP1P30622 MIR548X-201ENST00000580069 75 ntBASIC-4.63□□□□□ -3.15
CLIP1P30622 Y_RNA.460-201ENST00000384255 102 ntBASIC-4.63□□□□□ -3.15
CLIP1P30622 MIR548H4-201ENST00000408689 111 ntBASIC-4.63□□□□□ -3.15
CLIP1P30622 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.63□□□□□ -3.15
CLIP1P30622 MIR3938-201ENST00000582157 103 ntBASIC-4.63□□□□□ -3.15
CLIP1P30622 RNU6-940P-201ENST00000363433 104 ntBASIC-4.64□□□□□ -3.15
CLIP1P30622 Y_RNA.138-201ENST00000363462 102 ntBASIC-4.64□□□□□ -3.15
CLIP1P30622 RNU6-907P-201ENST00000390924 102 ntBASIC-4.64□□□□□ -3.15
CLIP1P30622 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.66□□□□□ -3.16
CLIP1P30622 Y_RNA.316-201ENST00000365118 111 ntBASIC-4.66□□□□□ -3.16
CLIP1P30622 RNU6-675P-201ENST00000384236 104 ntBASIC-4.66□□□□□ -3.16
CLIP1P30622 MALAT1.1-201ENST00000618249 95 ntBASIC-4.66□□□□□ -3.16
CLIP1P30622 Y_RNA.619-201ENST00000410951 90 ntBASIC-4.67□□□□□ -3.16
CLIP1P30622 RNU6-255P-201ENST00000516957 105 ntBASIC-4.67□□□□□ -3.16
CLIP1P30622 Y_RNA.720-201ENST00000517166 92 ntBASIC-4.67□□□□□ -3.16
CLIP1P30622 MTND5P41-201ENST00000517498 206 ntBASIC-4.67□□□□□ -3.16
CLIP1P30622 RNU6-979P-201ENST00000383896 107 ntBASIC-4.68□□□□□ -3.16
Retrieved 100 of 98,524 protein–RNA pairs in 257.4 ms