Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.82□□□□□ -2.7
PSMB4P28070 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.82□□□□□ -2.7
PSMB4P28070 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.83□□□□□ -2.7
PSMB4P28070 RNU6-608P-201ENST00000383927 104 ntBASIC-1.83□□□□□ -2.7
PSMB4P28070 RNU6-895P-201ENST00000384125 103 ntBASIC-1.83□□□□□ -2.7
PSMB4P28070 MIR4666B-201ENST00000578142 81 ntBASIC-1.83□□□□□ -2.7
PSMB4P28070 RNU6-294P-201ENST00000364999 102 ntBASIC-1.84□□□□□ -2.7
PSMB4P28070 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.84□□□□□ -2.7
PSMB4P28070 RNU6-400P-201ENST00000391173 106 ntBASIC-1.84□□□□□ -2.7
PSMB4P28070 RNA5SP405-201ENST00000363059 114 ntBASIC-1.85□□□□□ -2.71
PSMB4P28070 MIR494-201ENST00000349529 81 ntBASIC-1.86□□□□□ -2.71
PSMB4P28070 RNU6-79P-201ENST00000362511 107 ntBASIC-1.86□□□□□ -2.71
PSMB4P28070 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.86□□□□□ -2.71
PSMB4P28070 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.86□□□□□ -2.71
PSMB4P28070 RNU6-820P-201ENST00000384273 107 ntBASIC-1.86□□□□□ -2.71
PSMB4P28070 MIR548AA1-201ENST00000384971 97 ntBASIC-1.86□□□□□ -2.71
PSMB4P28070 MIR520D-201ENST00000385002 87 ntBASIC-1.86□□□□□ -2.71
PSMB4P28070 MIR23C-201ENST00000579846 100 ntBASIC-1.86□□□□□ -2.71
PSMB4P28070 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.87□□□□□ -2.71
PSMB4P28070 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.87□□□□□ -2.71
PSMB4P28070 MT-TM-201ENST00000387377 68 ntBASIC-1.88□□□□□ -2.71
PSMB4P28070 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.89□□□□□ -2.71
PSMB4P28070 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.89□□□□□ -2.71
PSMB4P28070 U2.18-201ENST00000622185 84 ntBASIC-1.89□□□□□ -2.71
PSMB4P28070 SNORD116-24-201ENST00000384549 92 ntBASIC-1.91□□□□□ -2.72
PSMB4P28070 SNORA41B-201ENST00000384785 128 ntBASIC-1.92□□□□□ -2.72
PSMB4P28070 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.92□□□□□ -2.72
PSMB4P28070 SNORD54-201ENST00000459159 67 ntBASIC-1.92□□□□□ -2.72
PSMB4P28070 RNA5SP93-201ENST00000362525 114 ntBASIC-1.93□□□□□ -2.72
PSMB4P28070 RNU6-194P-201ENST00000363862 105 ntBASIC-1.93□□□□□ -2.72
PSMB4P28070 RNU6-542P-201ENST00000516405 103 ntBASIC-1.94□□□□□ -2.72
PSMB4P28070 RNU4-88P-201ENST00000411220 86 ntBASIC-1.95□□□□□ -2.72
PSMB4P28070 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.95□□□□□ -2.72
PSMB4P28070 MIR3134-201ENST00000579433 74 ntBASIC-1.95□□□□□ -2.72
PSMB4P28070 MIR5582-201ENST00000579697 68 ntBASIC-1.95□□□□□ -2.72
PSMB4P28070 RNU6-687P-201ENST00000516443 89 ntBASIC-1.96□□□□□ -2.72
PSMB4P28070 MIR3170-201ENST00000582699 77 ntBASIC-1.96□□□□□ -2.72
PSMB4P28070 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.97□□□□□ -2.72
PSMB4P28070 SNORD115-31-201ENST00000365318 82 ntBASIC-1.97□□□□□ -2.72
PSMB4P28070 RNU6-411P-201ENST00000384451 107 ntBASIC-1.97□□□□□ -2.72
PSMB4P28070 RNU6-995P-201ENST00000391244 107 ntBASIC-1.97□□□□□ -2.72
PSMB4P28070 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.97□□□□□ -2.72
PSMB4P28070 MIR548AM-201ENST00000584298 74 ntBASIC-1.97□□□□□ -2.72
PSMB4P28070 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.97□□□□□ -2.72
PSMB4P28070 SNORD1B-201ENST00000363091 84 ntBASIC-1.98□□□□□ -2.73
PSMB4P28070 RNY4P7-201ENST00000364600 96 ntBASIC-1.98□□□□□ -2.73
PSMB4P28070 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.98□□□□□ -2.73
PSMB4P28070 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.98□□□□□ -2.73
PSMB4P28070 RNU6-695P-201ENST00000391157 104 ntBASIC-1.99□□□□□ -2.73
PSMB4P28070 AC120024.2-201ENST00000576526 175 ntBASIC-1.99□□□□□ -2.73
PSMB4P28070 Y_RNA.403-201ENST00000383977 101 ntBASIC-2□□□□□ -2.73
PSMB4P28070 U7.4-201ENST00000614961 63 ntBASIC-2□□□□□ -2.73
PSMB4P28070 Y_RNA.788-201ENST00000622394 112 ntBASIC-2□□□□□ -2.73
PSMB4P28070 RNU6-841P-201ENST00000383872 107 ntBASIC-2.01□□□□□ -2.73
PSMB4P28070 RNU6-787P-201ENST00000384032 107 ntBASIC-2.01□□□□□ -2.73
PSMB4P28070 RNU6-563P-201ENST00000364872 108 ntBASIC-2.02□□□□□ -2.73
PSMB4P28070 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.02□□□□□ -2.73
PSMB4P28070 MIR3123-201ENST00000583417 75 ntBASIC-2.02□□□□□ -2.73
PSMB4P28070 RNU6-247P-201ENST00000362636 107 ntBASIC-2.03□□□□□ -2.73
PSMB4P28070 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.03□□□□□ -2.73
PSMB4P28070 RNU6-258P-201ENST00000390884 101 ntBASIC-2.03□□□□□ -2.73
PSMB4P28070 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.03□□□□□ -2.73
PSMB4P28070 RNU6-92P-201ENST00000605893 104 ntBASIC-2.03□□□□□ -2.73
PSMB4P28070 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.04□□□□□ -2.74
PSMB4P28070 RNU7-151P-201ENST00000516930 53 ntBASIC-2.06□□□□□ -2.74
PSMB4P28070 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.06□□□□□ -2.74
PSMB4P28070 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.07□□□□□ -2.74
PSMB4P28070 AC062037.1-201ENST00000605302 128 ntBASIC-2.07□□□□□ -2.74
PSMB4P28070 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.07□□□□□ -2.74
PSMB4P28070 RNU6-172P-201ENST00000411000 93 ntBASIC-2.08□□□□□ -2.74
PSMB4P28070 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.09□□□□□ -2.74
PSMB4P28070 RNU6-634P-201ENST00000459134 106 ntBASIC-2.09□□□□□ -2.74
PSMB4P28070 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.09□□□□□ -2.74
PSMB4P28070 MIR3202-2-201ENST00000635980 79 ntBASIC-2.09□□□□□ -2.74
PSMB4P28070 MIR4748-201ENST00000578076 82 ntBASIC-2.1□□□□□ -2.75
PSMB4P28070 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.1□□□□□ -2.75
PSMB4P28070 SNORA27.2-201ENST00000363365 126 ntBASIC-2.11□□□□□ -2.75
PSMB4P28070 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.12□□□□□ -2.75
PSMB4P28070 MIR466-201ENST00000580653 84 ntBASIC-2.12□□□□□ -2.75
PSMB4P28070 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.13□□□□□ -2.75
PSMB4P28070 MIR579-201ENST00000385221 98 ntBASIC-2.13□□□□□ -2.75
PSMB4P28070 RNU7-160P-201ENST00000516660 62 ntBASIC-2.13□□□□□ -2.75
PSMB4P28070 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.13□□□□□ -2.75
PSMB4P28070 MIR7978-201ENST00000636158 59 ntBASIC-2.13□□□□□ -2.75
PSMB4P28070 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.13□□□□□ -2.75
PSMB4P28070 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.14□□□□□ -2.75
PSMB4P28070 RNU6-669P-201ENST00000365575 107 ntBASIC-2.14□□□□□ -2.75
PSMB4P28070 SNORD63.2-201ENST00000516303 64 ntBASIC-2.14□□□□□ -2.75
PSMB4P28070 MIR125B1-201ENST00000385236 88 ntBASIC-2.15□□□□□ -2.75
PSMB4P28070 RNU6-663P-201ENST00000391105 106 ntBASIC-2.15□□□□□ -2.75
PSMB4P28070 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.16□□□□□ -2.76
PSMB4P28070 RNA5SP170-201ENST00000517150 101 ntBASIC-2.16□□□□□ -2.76
PSMB4P28070 SNORD60.1-201ENST00000362451 73 ntBASIC-2.17□□□□□ -2.76
PSMB4P28070 AC005520.4-201ENST00000604337 90 ntBASIC-2.17□□□□□ -2.76
PSMB4P28070 AC013734.1-201ENST00000619329 111 ntBASIC-2.17□□□□□ -2.76
PSMB4P28070 RNU6-871P-201ENST00000516122 100 ntBASIC-2.18□□□□□ -2.76
PSMB4P28070 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.19□□□□□ -2.76
PSMB4P28070 MIR7110-201ENST00000612638 86 ntBASIC-2.19□□□□□ -2.76
PSMB4P28070 MIR548W-201ENST00000581970 74 ntBASIC-2.2□□□□□ -2.76
PSMB4P28070 SNORA25.4-201ENST00000363666 124 ntBASIC-2.21□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms