Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1□□□□□ -2.57
ZIC3O60481 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.01□□□□□ -2.57
ZIC3O60481 MIR6738-201ENST00000619620 64 ntBASIC-1.01□□□□□ -2.57
ZIC3O60481 MIR4320-201ENST00000636981 65 ntBASIC-1.01□□□□□ -2.57
ZIC3O60481 RNU6-122P-201ENST00000516818 107 ntBASIC-1.02□□□□□ -2.57
ZIC3O60481 RNA5SP192-201ENST00000364404 120 ntBASIC-1.03□□□□□ -2.57
ZIC3O60481 RNU6-10P-201ENST00000384036 107 ntBASIC-1.03□□□□□ -2.57
ZIC3O60481 MIR1468-201ENST00000410600 86 ntBASIC-1.03□□□□□ -2.57
ZIC3O60481 AC114801.3-201ENST00000510231 177 ntBASIC-1.03□□□□□ -2.57
ZIC3O60481 MIR6874-201ENST00000635894 71 ntBASIC-1.03□□□□□ -2.57
ZIC3O60481 RNU6-608P-201ENST00000383927 104 ntBASIC-1.04□□□□□ -2.58
ZIC3O60481 RNU6-576P-201ENST00000390854 102 ntBASIC-1.04□□□□□ -2.58
ZIC3O60481 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.04□□□□□ -2.58
ZIC3O60481 RNU6-172P-201ENST00000411000 93 ntBASIC-1.04□□□□□ -2.58
ZIC3O60481 AC091912.2-201ENST00000624798 167 ntBASIC-1.04□□□□□ -2.58
ZIC3O60481 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.05□□□□□ -2.58
ZIC3O60481 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.05□□□□□ -2.58
ZIC3O60481 RNU6-164P-201ENST00000364604 103 ntBASIC-1.06□□□□□ -2.58
ZIC3O60481 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.06□□□□□ -2.58
ZIC3O60481 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.06□□□□□ -2.58
ZIC3O60481 MIR4324-201ENST00000584846 72 ntBASIC-1.06□□□□□ -2.58
ZIC3O60481 RNU7-151P-201ENST00000516930 53 ntBASIC-1.07□□□□□ -2.58
ZIC3O60481 MIR3170-201ENST00000582699 77 ntBASIC-1.07□□□□□ -2.58
ZIC3O60481 MIR198-201ENST00000637333 62 ntBASIC-1.07□□□□□ -2.58
ZIC3O60481 MIR4306-201ENST00000583390 91 ntBASIC-1.08□□□□□ -2.58
ZIC3O60481 RNU6-995P-201ENST00000391244 107 ntBASIC-1.09□□□□□ -2.58
ZIC3O60481 RNU6-940P-201ENST00000363433 104 ntBASIC-1.1□□□□□ -2.59
ZIC3O60481 MIR579-201ENST00000385221 98 ntBASIC-1.1□□□□□ -2.59
ZIC3O60481 RNU6-258P-201ENST00000390884 101 ntBASIC-1.1□□□□□ -2.59
ZIC3O60481 RNU6-231P-201ENST00000517122 103 ntBASIC-1.1□□□□□ -2.59
ZIC3O60481 MIR7978-201ENST00000636158 59 ntBASIC-1.1□□□□□ -2.59
ZIC3O60481 MIR601-201ENST00000385256 79 ntBASIC-1.11□□□□□ -2.59
ZIC3O60481 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.11□□□□□ -2.59
ZIC3O60481 MIR7110-201ENST00000612638 86 ntBASIC-1.11□□□□□ -2.59
ZIC3O60481 AC110620.1-201ENST00000416042 228 ntBASIC-1.12□□□□□ -2.59
ZIC3O60481 RNU6-471P-201ENST00000383944 106 ntBASIC-1.13□□□□□ -2.59
ZIC3O60481 MIR125B1-201ENST00000385236 88 ntBASIC-1.14□□□□□ -2.59
ZIC3O60481 AC018880.2-201ENST00000414265 201 ntBASIC-1.15□□□□□ -2.59
ZIC3O60481 RNU6-669P-201ENST00000365575 107 ntBASIC-1.16□□□□□ -2.6
ZIC3O60481 RNU7-160P-201ENST00000516660 62 ntBASIC-1.16□□□□□ -2.6
ZIC3O60481 MIR466-201ENST00000580653 84 ntBASIC-1.16□□□□□ -2.6
ZIC3O60481 MIR6502-201ENST00000617296 76 ntBASIC-1.16□□□□□ -2.6
ZIC3O60481 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.16□□□□□ -2.6
ZIC3O60481 RNU6-247P-201ENST00000362636 107 ntBASIC-1.17□□□□□ -2.6
ZIC3O60481 SNORD116.2-201ENST00000391251 93 ntBASIC-1.17□□□□□ -2.6
ZIC3O60481 MIR4520-1-201ENST00000582609 70 ntBASIC-1.17□□□□□ -2.6
ZIC3O60481 RNU6-79P-201ENST00000362511 107 ntBASIC-1.18□□□□□ -2.6
ZIC3O60481 RNU6-563P-201ENST00000364872 108 ntBASIC-1.18□□□□□ -2.6
ZIC3O60481 RNU6-974P-201ENST00000384099 108 ntBASIC-1.18□□□□□ -2.6
ZIC3O60481 RNU6-706P-201ENST00000517229 104 ntBASIC-1.18□□□□□ -2.6
ZIC3O60481 MIR3938-201ENST00000582157 103 ntBASIC-1.18□□□□□ -2.6
ZIC3O60481 RNU6-810P-201ENST00000364001 107 ntBASIC-1.19□□□□□ -2.6
ZIC3O60481 RNU7-119P-201ENST00000459279 63 ntBASIC-1.19□□□□□ -2.6
ZIC3O60481 SNORD63.2-201ENST00000516303 64 ntBASIC-1.19□□□□□ -2.6
ZIC3O60481 AC120024.2-201ENST00000576526 175 ntBASIC-1.2□□□□□ -2.6
ZIC3O60481 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.21□□□□□ -2.6
ZIC3O60481 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.22□□□□□ -2.6
ZIC3O60481 SNORA40B-201ENST00000385573 128 ntBASIC-1.22□□□□□ -2.6
ZIC3O60481 MIR4723-201ENST00000585070 81 ntBASIC-1.22□□□□□ -2.6
ZIC3O60481 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.23□□□□□ -2.61
ZIC3O60481 SNORA40.16-201ENST00000517238 121 ntBASIC-1.23□□□□□ -2.61
ZIC3O60481 MIR3165-201ENST00000579874 75 ntBASIC-1.23□□□□□ -2.61
ZIC3O60481 AC138207.3-201ENST00000585289 166 ntBASIC-1.23□□□□□ -2.61
ZIC3O60481 RNU6-520P-201ENST00000384717 104 ntBASIC-1.24□□□□□ -2.61
ZIC3O60481 MIR5591-201ENST00000578248 65 ntBASIC-1.24□□□□□ -2.61
ZIC3O60481 MIR23C-201ENST00000579846 100 ntBASIC-1.24□□□□□ -2.61
ZIC3O60481 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.25□□□□□ -2.61
ZIC3O60481 HLA-S-202ENST00000425174 53 ntBASIC-1.25□□□□□ -2.61
ZIC3O60481 MIR3115-201ENST00000577915 68 ntBASIC-1.25□□□□□ -2.61
ZIC3O60481 SNORA27.2-201ENST00000363365 126 ntBASIC-1.26□□□□□ -2.61
ZIC3O60481 RNU6-590P-201ENST00000365039 107 ntBASIC-1.26□□□□□ -2.61
ZIC3O60481 AC013734.1-201ENST00000619329 111 ntBASIC-1.26□□□□□ -2.61
ZIC3O60481 RNU6-828P-201ENST00000364876 107 ntBASIC-1.27□□□□□ -2.61
ZIC3O60481 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.27□□□□□ -2.61
ZIC3O60481 RNU6-400P-201ENST00000391173 106 ntBASIC-1.27□□□□□ -2.61
ZIC3O60481 RNY3P8-201ENST00000411366 126 ntBASIC-1.27□□□□□ -2.61
ZIC3O60481 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.27□□□□□ -2.61
ZIC3O60481 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.27□□□□□ -2.61
ZIC3O60481 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.27□□□□□ -2.61
ZIC3O60481 U4.2-201ENST00000618561 85 ntBASIC-1.27□□□□□ -2.61
ZIC3O60481 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.27□□□□□ -2.61
ZIC3O60481 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.28□□□□□ -2.61
ZIC3O60481 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.29□□□□□ -2.62
ZIC3O60481 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.3□□□□□ -2.62
ZIC3O60481 MIR4770-201ENST00000579149 58 ntBASIC-1.3□□□□□ -2.62
ZIC3O60481 U6.97-201ENST00000636904 101 ntBASIC-1.31□□□□□ -2.62
ZIC3O60481 MIR487B-201ENST00000385021 84 ntBASIC-1.32□□□□□ -2.62
ZIC3O60481 RNA5SP86-201ENST00000390869 98 ntBASIC-1.32□□□□□ -2.62
ZIC3O60481 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.33□□□□□ -2.62
ZIC3O60481 RNU6-226P-201ENST00000363778 107 ntBASIC-1.33□□□□□ -2.62
ZIC3O60481 RNU6-695P-201ENST00000391157 104 ntBASIC-1.33□□□□□ -2.62
ZIC3O60481 RNA5SP461-201ENST00000516451 104 ntBASIC-1.33□□□□□ -2.62
ZIC3O60481 MIR548H1-201ENST00000408610 102 ntBASIC-1.34□□□□□ -2.62
ZIC3O60481 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.35□□□□□ -2.63
ZIC3O60481 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.35□□□□□ -2.63
ZIC3O60481 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.35□□□□□ -2.63
ZIC3O60481 AC125388.1-201ENST00000459631 156 ntBASIC-1.35□□□□□ -2.63
ZIC3O60481 RNA5SP180-201ENST00000516181 101 ntBASIC-1.35□□□□□ -2.63
ZIC3O60481 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.35□□□□□ -2.63
ZIC3O60481 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms