Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MIR3128-201ENST00000581957 66 ntBASIC-4.33□□□□□ -3.1
HMGN4O00479 MIR3171-201ENST00000584270 74 ntBASIC-4.33□□□□□ -3.1
HMGN4O00479 RNU6-822P-201ENST00000362707 106 ntBASIC-4.34□□□□□ -3.1
HMGN4O00479 Y_RNA.202-201ENST00000364083 110 ntBASIC-4.34□□□□□ -3.1
HMGN4O00479 Y_RNA.290-201ENST00000364879 114 ntBASIC-4.34□□□□□ -3.1
HMGN4O00479 MTND4LP9-201ENST00000427694 174 ntBASIC-4.34□□□□□ -3.1
HMGN4O00479 Y_RNA.712-201ENST00000517011 92 ntBASIC-4.34□□□□□ -3.1
HMGN4O00479 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.35□□□□□ -3.11
HMGN4O00479 MIR664A-201ENST00000626086 82 ntBASIC-4.35□□□□□ -3.11
HMGN4O00479 RNU6-737P-201ENST00000365370 107 ntBASIC-4.36□□□□□ -3.11
HMGN4O00479 RNU6-109P-201ENST00000516364 107 ntBASIC-4.36□□□□□ -3.11
HMGN4O00479 RNU6-184P-201ENST00000516514 107 ntBASIC-4.36□□□□□ -3.11
HMGN4O00479 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.37□□□□□ -3.11
HMGN4O00479 RNU6-394P-201ENST00000410735 107 ntBASIC-4.37□□□□□ -3.11
HMGN4O00479 RNU6-1023P-201ENST00000516137 106 ntBASIC-4.37□□□□□ -3.11
HMGN4O00479 RNU6-497P-201ENST00000365316 104 ntBASIC-4.38□□□□□ -3.11
HMGN4O00479 SNORA20.1-201ENST00000364790 130 ntBASIC-4.39□□□□□ -3.11
HMGN4O00479 RNU6-895P-201ENST00000384125 103 ntBASIC-4.39□□□□□ -3.11
HMGN4O00479 RNU7-120P-201ENST00000459334 63 ntBASIC-4.39□□□□□ -3.11
HMGN4O00479 SNORA40.16-201ENST00000517238 121 ntBASIC-4.39□□□□□ -3.11
HMGN4O00479 MIR548BB-201ENST00000626714 66 ntBASIC-4.39□□□□□ -3.11
HMGN4O00479 RNU6-196P-201ENST00000384315 107 ntBASIC-4.4□□□□□ -3.11
HMGN4O00479 RNU6-426P-201ENST00000516464 97 ntBASIC-4.4□□□□□ -3.11
HMGN4O00479 U6atac.1-201ENST00000616025 117 ntBASIC-4.4□□□□□ -3.11
HMGN4O00479 Y_RNA.138-201ENST00000363462 102 ntBASIC-4.42□□□□□ -3.12
HMGN4O00479 SNORD116-22-201ENST00000384430 92 ntBASIC-4.42□□□□□ -3.12
HMGN4O00479 Y_RNA.297-201ENST00000364950 91 ntBASIC-4.43□□□□□ -3.12
HMGN4O00479 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.43□□□□□ -3.12
HMGN4O00479 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.43□□□□□ -3.12
HMGN4O00479 SNORD115-45-201ENST00000391078 81 ntBASIC-4.43□□□□□ -3.12
HMGN4O00479 MIR548F4-201ENST00000408515 105 ntBASIC-4.43□□□□□ -3.12
HMGN4O00479 AC020661.2-201ENST00000560114 134 ntBASIC-4.43□□□□□ -3.12
HMGN4O00479 RNU6-219P-201ENST00000364728 107 ntBASIC-4.44□□□□□ -3.12
HMGN4O00479 RNU6-742P-201ENST00000365289 107 ntBASIC-4.44□□□□□ -3.12
HMGN4O00479 SNORD116-21-201ENST00000384507 92 ntBASIC-4.44□□□□□ -3.12
HMGN4O00479 MT-TD-201ENST00000387419 68 ntBASIC-4.44□□□□□ -3.12
HMGN4O00479 SNORA40-201ENST00000388090 126 ntBASIC-4.44□□□□□ -3.12
HMGN4O00479 SNORA63-201ENST00000363450 132 ntBASIC-4.45□□□□□ -3.12
HMGN4O00479 SNORA19-201ENST00000384737 128 ntBASIC-4.45□□□□□ -3.12
HMGN4O00479 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.47□□□□□ -3.13
HMGN4O00479 RNU7-119P-201ENST00000459279 63 ntBASIC-4.47□□□□□ -3.13
HMGN4O00479 AC062037.1-201ENST00000605302 128 ntBASIC-4.47□□□□□ -3.13
HMGN4O00479 RNU6-804P-201ENST00000384286 107 ntBASIC-4.48□□□□□ -3.13
HMGN4O00479 MIR154-201ENST00000385243 84 ntBASIC-4.48□□□□□ -3.13
HMGN4O00479 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-4.48□□□□□ -3.13
HMGN4O00479 RNU6-665P-201ENST00000384639 107 ntBASIC-4.49□□□□□ -3.13
HMGN4O00479 RNU6-267P-201ENST00000516714 103 ntBASIC-4.5□□□□□ -3.13
HMGN4O00479 AC004792.1-201ENST00000614523 137 ntBASIC-4.5□□□□□ -3.13
HMGN4O00479 Y_RNA.611-201ENST00000410682 108 ntBASIC-4.51□□□□□ -3.13
HMGN4O00479 Y_RNA.720-201ENST00000517166 92 ntBASIC-4.51□□□□□ -3.13
HMGN4O00479 AC139453.2-201ENST00000487255 133 ntBASIC-4.52□□□□□ -3.13
HMGN4O00479 Y_RNA.460-201ENST00000384255 102 ntBASIC-4.53□□□□□ -3.13
HMGN4O00479 RNU6-315P-201ENST00000362666 107 ntBASIC-4.54□□□□□ -3.14
HMGN4O00479 Y_RNA.218-201ENST00000364218 104 ntBASIC-4.54□□□□□ -3.14
HMGN4O00479 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.54□□□□□ -3.14
HMGN4O00479 MIR656-201ENST00000385224 78 ntBASIC-4.54□□□□□ -3.14
HMGN4O00479 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.54□□□□□ -3.14
HMGN4O00479 RNU6-257P-201ENST00000410238 98 ntBASIC-4.55□□□□□ -3.14
HMGN4O00479 RNU6-419P-201ENST00000517030 63 ntBASIC-4.55□□□□□ -3.14
HMGN4O00479 AC062037.2-201ENST00000610137 73 ntBASIC-4.55□□□□□ -3.14
HMGN4O00479 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.56□□□□□ -3.14
HMGN4O00479 Y_RNA.149-201ENST00000363558 117 ntBASIC-4.56□□□□□ -3.14
HMGN4O00479 RNU6-122P-201ENST00000516818 107 ntBASIC-4.56□□□□□ -3.14
HMGN4O00479 MIR2052-201ENST00000636055 55 ntBASIC-4.56□□□□□ -3.14
HMGN4O00479 AC006160.2-201ENST00000637708 154 ntBASIC-4.56□□□□□ -3.14
HMGN4O00479 RNU6-797P-201ENST00000363101 109 ntBASIC-4.57□□□□□ -3.14
HMGN4O00479 Y_RNA.544-201ENST00000384650 113 ntBASIC-4.57□□□□□ -3.14
HMGN4O00479 Y_RNA.619-201ENST00000410951 90 ntBASIC-4.57□□□□□ -3.14
HMGN4O00479 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-4.58□□□□□ -3.14
HMGN4O00479 MTND5P20-201ENST00000448677 143 ntBASIC-4.58□□□□□ -3.14
HMGN4O00479 RNU6-70P-201ENST00000516438 60 ntBASIC-4.58□□□□□ -3.14
HMGN4O00479 AL117187.1-201ENST00000555482 181 ntBASIC-4.58□□□□□ -3.14
HMGN4O00479 RNU6-1015P-201ENST00000517121 99 ntBASIC-4.6□□□□□ -3.15
HMGN4O00479 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.61□□□□□ -3.15
HMGN4O00479 Y_RNA.702-201ENST00000516843 96 ntBASIC-4.61□□□□□ -3.15
HMGN4O00479 RNU6-854P-201ENST00000364036 107 ntBASIC-4.62□□□□□ -3.15
HMGN4O00479 MIR124-1-201ENST00000385275 85 ntBASIC-4.63□□□□□ -3.15
HMGN4O00479 MTND5P41-201ENST00000517498 206 ntBASIC-4.64□□□□□ -3.15
HMGN4O00479 SNORA25.5-201ENST00000363782 126 ntBASIC-4.65□□□□□ -3.15
HMGN4O00479 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.65□□□□□ -3.15
HMGN4O00479 RNA5SP224-201ENST00000365069 126 ntBASIC-4.65□□□□□ -3.15
HMGN4O00479 AC026407.1-201ENST00000518369 204 ntBASIC-4.65□□□□□ -3.15
HMGN4O00479 MIR3908-201ENST00000579798 126 ntBASIC-4.65□□□□□ -3.15
HMGN4O00479 Y_RNA.343-201ENST00000365354 112 ntBASIC-4.67□□□□□ -3.16
HMGN4O00479 Y_RNA.206-201ENST00000364136 102 ntBASIC-4.68□□□□□ -3.16
HMGN4O00479 SNORD45C-201ENST00000383893 79 ntBASIC-4.68□□□□□ -3.16
HMGN4O00479 Y_RNA.607-201ENST00000410597 98 ntBASIC-4.68□□□□□ -3.16
HMGN4O00479 Y_RNA.273-201ENST00000364703 102 ntBASIC-4.69□□□□□ -3.16
HMGN4O00479 Y_RNA.422-201ENST00000384054 114 ntBASIC-4.69□□□□□ -3.16
HMGN4O00479 MIR548AH-201ENST00000637109 76 ntBASIC-4.69□□□□□ -3.16
HMGN4O00479 RNU6-675P-201ENST00000384236 104 ntBASIC-4.72□□□□□ -3.17
HMGN4O00479 MTCYBP6-201ENST00000441810 138 ntBASIC-4.73□□□□□ -3.17
HMGN4O00479 SCARNA15.1-201ENST00000516384 125 ntBASIC-4.73□□□□□ -3.17
HMGN4O00479 MALAT1.1-201ENST00000618249 95 ntBASIC-4.73□□□□□ -3.17
HMGN4O00479 MIR1302-3-201ENST00000408128 138 ntBASIC-4.74□□□□□ -3.17
HMGN4O00479 MIR4801-201ENST00000582704 82 ntBASIC-4.74□□□□□ -3.17
HMGN4O00479 RNU6-200P-201ENST00000364743 107 ntBASIC-4.75□□□□□ -3.17
HMGN4O00479 MIR4317-201ENST00000637586 65 ntBASIC-4.75□□□□□ -3.17
HMGN4O00479 RNU6-836P-201ENST00000362920 107 ntBASIC-4.76□□□□□ -3.17
HMGN4O00479 RNU6-687P-201ENST00000516443 89 ntBASIC-4.76□□□□□ -3.17
Retrieved 100 of 98,524 protein–RNA pairs in 245.6 ms