Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC134503.1-201ENST00000633048 54 ntBASIC-3.77□□□□□ -3.01
HLA-DRB4X5D2U9 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.78□□□□□ -3.01
HLA-DRB4X5D2U9 Y_RNA.200-201ENST00000364018 102 ntBASIC-3.78□□□□□ -3.01
HLA-DRB4X5D2U9 SNORD115-45-201ENST00000391078 81 ntBASIC-3.79□□□□□ -3.02
HLA-DRB4X5D2U9 Y_RNA.216-201ENST00000364205 93 ntBASIC-3.8□□□□□ -3.02
HLA-DRB4X5D2U9 Y_RNA.240-201ENST00000364469 95 ntBASIC-3.8□□□□□ -3.02
HLA-DRB4X5D2U9 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.8□□□□□ -3.02
HLA-DRB4X5D2U9 SNORA41B-201ENST00000384785 128 ntBASIC-3.8□□□□□ -3.02
HLA-DRB4X5D2U9 RNA5SP215-201ENST00000363440 122 ntBASIC-3.81□□□□□ -3.02
HLA-DRB4X5D2U9 RNA5SP173-201ENST00000364857 136 ntBASIC-3.81□□□□□ -3.02
HLA-DRB4X5D2U9 SNORA8.1-201ENST00000384250 140 ntBASIC-3.81□□□□□ -3.02
HLA-DRB4X5D2U9 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.81□□□□□ -3.02
HLA-DRB4X5D2U9 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.81□□□□□ -3.02
HLA-DRB4X5D2U9 MTND4P29-201ENST00000503122 1372 ntBASIC-3.81□□□□□ -3.02
HLA-DRB4X5D2U9 AL157777.2-201ENST00000258070 137 ntBASIC-3.82□□□□□ -3.02
HLA-DRB4X5D2U9 RNU6-330P-201ENST00000363015 107 ntBASIC-3.82□□□□□ -3.02
HLA-DRB4X5D2U9 Y_RNA.478-201ENST00000384358 107 ntBASIC-3.82□□□□□ -3.02
HLA-DRB4X5D2U9 RNU6-665P-201ENST00000384639 107 ntBASIC-3.82□□□□□ -3.02
HLA-DRB4X5D2U9 Y_RNA.574-201ENST00000384766 95 ntBASIC-3.82□□□□□ -3.02
HLA-DRB4X5D2U9 MIR519C-201ENST00000385053 87 ntBASIC-3.82□□□□□ -3.02
HLA-DRB4X5D2U9 MTND4LP1-201ENST00000446263 157 ntBASIC-3.82□□□□□ -3.02
HLA-DRB4X5D2U9 SNORD45.1-201ENST00000363181 77 ntBASIC-3.83□□□□□ -3.02
HLA-DRB4X5D2U9 RNY4P18-201ENST00000391107 89 ntBASIC-3.83□□□□□ -3.02
HLA-DRB4X5D2U9 RNU6-772P-201ENST00000516042 105 ntBASIC-3.83□□□□□ -3.02
HLA-DRB4X5D2U9 MIR548X2-201ENST00000579776 100 ntBASIC-3.83□□□□□ -3.02
HLA-DRB4X5D2U9 RNU4-40P-201ENST00000364351 143 ntBASIC-3.85□□□□□ -3.03
HLA-DRB4X5D2U9 RNU6-172P-201ENST00000411000 93 ntBASIC-3.85□□□□□ -3.03
HLA-DRB4X5D2U9 RNU6-182P-201ENST00000516970 105 ntBASIC-3.85□□□□□ -3.03
HLA-DRB4X5D2U9 MTATP8P1-201ENST00000467115 207 ntBASIC-3.86□□□□□ -3.03
HLA-DRB4X5D2U9 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.86□□□□□ -3.03
HLA-DRB4X5D2U9 MIR3171-201ENST00000584270 74 ntBASIC-3.86□□□□□ -3.03
HLA-DRB4X5D2U9 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.87□□□□□ -3.03
HLA-DRB4X5D2U9 RNU6-574P-201ENST00000384265 107 ntBASIC-3.87□□□□□ -3.03
HLA-DRB4X5D2U9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.87□□□□□ -3.03
HLA-DRB4X5D2U9 RNU6-904P-201ENST00000516206 101 ntBASIC-3.87□□□□□ -3.03
HLA-DRB4X5D2U9 RNU6-303P-201ENST00000517091 106 ntBASIC-3.87□□□□□ -3.03
HLA-DRB4X5D2U9 RNU6-129P-201ENST00000391022 107 ntBASIC-3.88□□□□□ -3.03
HLA-DRB4X5D2U9 Y_RNA.202-201ENST00000364083 110 ntBASIC-3.89□□□□□ -3.03
HLA-DRB4X5D2U9 MT-TD-201ENST00000387419 68 ntBASIC-3.89□□□□□ -3.03
HLA-DRB4X5D2U9 RNU7-61P-201ENST00000515897 61 ntBASIC-3.89□□□□□ -3.03
HLA-DRB4X5D2U9 RNU6-590P-201ENST00000365039 107 ntBASIC-3.9□□□□□ -3.03
HLA-DRB4X5D2U9 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.9□□□□□ -3.03
HLA-DRB4X5D2U9 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.92□□□□□ -3.04
HLA-DRB4X5D2U9 RNU6-854P-201ENST00000364036 107 ntBASIC-3.92□□□□□ -3.04
HLA-DRB4X5D2U9 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.92□□□□□ -3.04
HLA-DRB4X5D2U9 RNU6-111P-201ENST00000517179 105 ntBASIC-3.92□□□□□ -3.04
HLA-DRB4X5D2U9 Y_RNA.138-201ENST00000363462 102 ntBASIC-3.93□□□□□ -3.04
HLA-DRB4X5D2U9 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.93□□□□□ -3.04
HLA-DRB4X5D2U9 RNU6-624P-201ENST00000363411 107 ntBASIC-3.94□□□□□ -3.04
HLA-DRB4X5D2U9 SNORD116-18-201ENST00000383961 92 ntBASIC-3.94□□□□□ -3.04
HLA-DRB4X5D2U9 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.94□□□□□ -3.04
HLA-DRB4X5D2U9 RNU6-554P-201ENST00000410466 106 ntBASIC-3.94□□□□□ -3.04
HLA-DRB4X5D2U9 MIR4426-201ENST00000640330 63 ntBASIC-3.94□□□□□ -3.04
HLA-DRB4X5D2U9 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.95□□□□□ -3.04
HLA-DRB4X5D2U9 MIR124-1-201ENST00000385275 85 ntBASIC-3.96□□□□□ -3.04
HLA-DRB4X5D2U9 RNU6-300P-201ENST00000459080 104 ntBASIC-3.96□□□□□ -3.04
HLA-DRB4X5D2U9 RNU6-162P-201ENST00000516228 103 ntBASIC-3.96□□□□□ -3.04
HLA-DRB4X5D2U9 RNU7-160P-201ENST00000516660 62 ntBASIC-3.96□□□□□ -3.04
HLA-DRB4X5D2U9 AC020661.2-201ENST00000560114 134 ntBASIC-3.96□□□□□ -3.04
HLA-DRB4X5D2U9 MIR3128-201ENST00000581957 66 ntBASIC-3.96□□□□□ -3.04
HLA-DRB4X5D2U9 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.97□□□□□ -3.04
HLA-DRB4X5D2U9 MIR569-201ENST00000385228 96 ntBASIC-3.97□□□□□ -3.04
HLA-DRB4X5D2U9 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.97□□□□□ -3.04
HLA-DRB4X5D2U9 AC074348.1-201ENST00000426503 132 ntBASIC-3.97□□□□□ -3.04
HLA-DRB4X5D2U9 RNU6-176P-201ENST00000517196 105 ntBASIC-3.99□□□□□ -3.05
HLA-DRB4X5D2U9 U7.3-201ENST00000616123 62 ntBASIC-3.99□□□□□ -3.05
HLA-DRB4X5D2U9 MIR548AH-201ENST00000637109 76 ntBASIC-3.99□□□□□ -3.05
HLA-DRB4X5D2U9 RNU6-1211P-201ENST00000459179 105 ntBASIC-4□□□□□ -3.05
HLA-DRB4X5D2U9 RNU6-557P-201ENST00000516842 110 ntBASIC-4□□□□□ -3.05
HLA-DRB4X5D2U9 SNORA20.1-201ENST00000364790 130 ntBASIC-4.01□□□□□ -3.05
HLA-DRB4X5D2U9 MTND5P20-201ENST00000448677 143 ntBASIC-4.01□□□□□ -3.05
HLA-DRB4X5D2U9 RNU6-1023P-201ENST00000516137 106 ntBASIC-4.01□□□□□ -3.05
HLA-DRB4X5D2U9 MTATP8P2-201ENST00000435212 202 ntBASIC-4.02□□□□□ -3.05
HLA-DRB4X5D2U9 Y_RNA.702-201ENST00000516843 96 ntBASIC-4.02□□□□□ -3.05
HLA-DRB4X5D2U9 MIR548F4-201ENST00000408515 105 ntBASIC-4.03□□□□□ -3.05
HLA-DRB4X5D2U9 MIR8053-201ENST00000613344 75 ntBASIC-4.03□□□□□ -3.05
HLA-DRB4X5D2U9 Y_RNA.107-201ENST00000363190 121 ntBASIC-4.04□□□□□ -3.06
HLA-DRB4X5D2U9 AC093729.1-201ENST00000513074 128 ntBASIC-4.04□□□□□ -3.06
HLA-DRB4X5D2U9 SNORD33.1-201ENST00000516213 88 ntBASIC-4.04□□□□□ -3.06
HLA-DRB4X5D2U9 RNU6-633P-201ENST00000362612 103 ntBASIC-4.05□□□□□ -3.06
HLA-DRB4X5D2U9 SNORD113.1-201ENST00000363280 73 ntBASIC-4.05□□□□□ -3.06
HLA-DRB4X5D2U9 RNU6-686P-201ENST00000364839 107 ntBASIC-4.05□□□□□ -3.06
HLA-DRB4X5D2U9 Y_RNA.460-201ENST00000384255 102 ntBASIC-4.05□□□□□ -3.06
HLA-DRB4X5D2U9 RNU6-755P-201ENST00000364400 103 ntBASIC-4.06□□□□□ -3.06
HLA-DRB4X5D2U9 MIR3914-2-201ENST00000637339 95 ntBASIC-4.06□□□□□ -3.06
HLA-DRB4X5D2U9 RNU6-1107P-201ENST00000364817 104 ntBASIC-4.07□□□□□ -3.06
HLA-DRB4X5D2U9 Y_RNA.720-201ENST00000517166 92 ntBASIC-4.07□□□□□ -3.06
HLA-DRB4X5D2U9 RNU6-1325P-201ENST00000364905 105 ntBASIC-4.08□□□□□ -3.06
HLA-DRB4X5D2U9 RNU7-107P-201ENST00000459121 61 ntBASIC-4.08□□□□□ -3.06
HLA-DRB4X5D2U9 SNORA63-201ENST00000363450 132 ntBASIC-4.09□□□□□ -3.06
HLA-DRB4X5D2U9 Y_RNA.297-201ENST00000364950 91 ntBASIC-4.09□□□□□ -3.06
HLA-DRB4X5D2U9 MIR590-201ENST00000385008 97 ntBASIC-4.09□□□□□ -3.06
HLA-DRB4X5D2U9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-4.09□□□□□ -3.06
HLA-DRB4X5D2U9 RNU7-120P-201ENST00000459334 63 ntBASIC-4.09□□□□□ -3.06
HLA-DRB4X5D2U9 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.1□□□□□ -3.07
HLA-DRB4X5D2U9 RNU6-402P-201ENST00000410678 103 ntBASIC-4.1□□□□□ -3.07
HLA-DRB4X5D2U9 MTND4LP9-201ENST00000427694 174 ntBASIC-4.1□□□□□ -3.07
HLA-DRB4X5D2U9 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.11□□□□□ -3.07
HLA-DRB4X5D2U9 MIR656-201ENST00000385224 78 ntBASIC-4.11□□□□□ -3.07
HLA-DRB4X5D2U9 RNU6-394P-201ENST00000410735 107 ntBASIC-4.11□□□□□ -3.07
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms