Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SNORA19-201ENST00000384737 128 ntBASIC-2.02□□□□□ -2.73
RHBDD3Q9Y3P4 SNORD54-201ENST00000459159 67 ntBASIC-2.02□□□□□ -2.73
RHBDD3Q9Y3P4 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.03□□□□□ -2.73
RHBDD3Q9Y3P4 RNU6-907P-201ENST00000390924 102 ntBASIC-2.03□□□□□ -2.73
RHBDD3Q9Y3P4 MIR1302-5-201ENST00000408164 150 ntBASIC-2.03□□□□□ -2.73
RHBDD3Q9Y3P4 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.03□□□□□ -2.73
RHBDD3Q9Y3P4 RNU6-554P-201ENST00000410466 106 ntBASIC-2.03□□□□□ -2.73
RHBDD3Q9Y3P4 MTATP8P2-201ENST00000435212 202 ntBASIC-2.03□□□□□ -2.73
RHBDD3Q9Y3P4 SNORD63.2-201ENST00000516303 64 ntBASIC-2.03□□□□□ -2.73
RHBDD3Q9Y3P4 MIR4484-201ENST00000582855 83 ntBASIC-2.03□□□□□ -2.73
RHBDD3Q9Y3P4 AL353621.2-201ENST00000605340 133 ntBASIC-2.03□□□□□ -2.73
RHBDD3Q9Y3P4 SNORA27.2-201ENST00000363365 126 ntBASIC-2.04□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-194P-201ENST00000363862 105 ntBASIC-2.04□□□□□ -2.74
RHBDD3Q9Y3P4 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.04□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-886P-201ENST00000384319 105 ntBASIC-2.04□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-106P-201ENST00000384405 107 ntBASIC-2.04□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-267P-201ENST00000516714 103 ntBASIC-2.04□□□□□ -2.74
RHBDD3Q9Y3P4 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.04□□□□□ -2.74
RHBDD3Q9Y3P4 MIR7978-201ENST00000636158 59 ntBASIC-2.04□□□□□ -2.74
RHBDD3Q9Y3P4 SNORA63-201ENST00000363450 132 ntBASIC-2.05□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-557P-201ENST00000516842 110 ntBASIC-2.05□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-182P-201ENST00000516970 105 ntBASIC-2.05□□□□□ -2.74
RHBDD3Q9Y3P4 SNORD113.1-201ENST00000363280 73 ntBASIC-2.06□□□□□ -2.74
RHBDD3Q9Y3P4 RNA5SP215-201ENST00000363440 122 ntBASIC-2.06□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-668P-201ENST00000364180 107 ntBASIC-2.06□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-686P-201ENST00000364839 107 ntBASIC-2.06□□□□□ -2.74
RHBDD3Q9Y3P4 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.06□□□□□ -2.74
RHBDD3Q9Y3P4 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.07□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.07□□□□□ -2.74
RHBDD3Q9Y3P4 RNA5SP93-201ENST00000362525 114 ntBASIC-2.07□□□□□ -2.74
RHBDD3Q9Y3P4 RNY4P18-201ENST00000391107 89 ntBASIC-2.07□□□□□ -2.74
RHBDD3Q9Y3P4 MTND4LP1-201ENST00000446263 157 ntBASIC-2.07□□□□□ -2.74
RHBDD3Q9Y3P4 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.07□□□□□ -2.74
RHBDD3Q9Y3P4 MIR664A-201ENST00000626086 82 ntBASIC-2.07□□□□□ -2.74
RHBDD3Q9Y3P4 SNORD45A-201ENST00000384512 84 ntBASIC-2.08□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-995P-201ENST00000391244 107 ntBASIC-2.08□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-172P-201ENST00000411000 93 ntBASIC-2.08□□□□□ -2.74
RHBDD3Q9Y3P4 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.08□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-219P-201ENST00000364728 107 ntBASIC-2.09□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-497P-201ENST00000365316 104 ntBASIC-2.09□□□□□ -2.74
RHBDD3Q9Y3P4 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.09□□□□□ -2.74
RHBDD3Q9Y3P4 MIR581-201ENST00000384895 96 ntBASIC-2.09□□□□□ -2.74
RHBDD3Q9Y3P4 RNU6-523P-201ENST00000516304 54 ntBASIC-2.09□□□□□ -2.74
RHBDD3Q9Y3P4 AP001318.4-201ENST00000616637 121 ntBASIC-2.09□□□□□ -2.74
RHBDD3Q9Y3P4 MIR548BB-201ENST00000626714 66 ntBASIC-2.09□□□□□ -2.74
RHBDD3Q9Y3P4 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.1□□□□□ -2.75
RHBDD3Q9Y3P4 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.11□□□□□ -2.75
RHBDD3Q9Y3P4 MIR125B1-201ENST00000385236 88 ntBASIC-2.11□□□□□ -2.75
RHBDD3Q9Y3P4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.11□□□□□ -2.75
RHBDD3Q9Y3P4 RNU6-402P-201ENST00000410678 103 ntBASIC-2.11□□□□□ -2.75
RHBDD3Q9Y3P4 AL117351.2-201ENST00000513571 157 ntBASIC-2.11□□□□□ -2.75
RHBDD3Q9Y3P4 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.12□□□□□ -2.75
RHBDD3Q9Y3P4 RNU6-255P-201ENST00000516957 105 ntBASIC-2.12□□□□□ -2.75
RHBDD3Q9Y3P4 SNORD116-14-201ENST00000383894 92 ntBASIC-2.13□□□□□ -2.75
RHBDD3Q9Y3P4 SNORD116-17-201ENST00000383929 92 ntBASIC-2.13□□□□□ -2.75
RHBDD3Q9Y3P4 RNU6-463P-201ENST00000384340 107 ntBASIC-2.13□□□□□ -2.75
RHBDD3Q9Y3P4 SNORD116-15-201ENST00000384445 92 ntBASIC-2.13□□□□□ -2.75
RHBDD3Q9Y3P4 SNORD116-19-201ENST00000384729 92 ntBASIC-2.13□□□□□ -2.75
RHBDD3Q9Y3P4 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.14□□□□□ -2.75
RHBDD3Q9Y3P4 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.14□□□□□ -2.75
RHBDD3Q9Y3P4 RNU6-129P-201ENST00000391022 107 ntBASIC-2.14□□□□□ -2.75
RHBDD3Q9Y3P4 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.14□□□□□ -2.75
RHBDD3Q9Y3P4 SNORD116-22-201ENST00000384430 92 ntBASIC-2.15□□□□□ -2.75
RHBDD3Q9Y3P4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.15□□□□□ -2.75
RHBDD3Q9Y3P4 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.16□□□□□ -2.76
RHBDD3Q9Y3P4 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.16□□□□□ -2.76
RHBDD3Q9Y3P4 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.16□□□□□ -2.76
RHBDD3Q9Y3P4 MIR4748-201ENST00000578076 82 ntBASIC-2.16□□□□□ -2.76
RHBDD3Q9Y3P4 MIR8053-201ENST00000613344 75 ntBASIC-2.16□□□□□ -2.76
RHBDD3Q9Y3P4 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.17□□□□□ -2.76
RHBDD3Q9Y3P4 SNORD18C-201ENST00000362704 69 ntBASIC-2.18□□□□□ -2.76
RHBDD3Q9Y3P4 RNA5SP173-201ENST00000364857 136 ntBASIC-2.19□□□□□ -2.76
RHBDD3Q9Y3P4 SNORD116-24-201ENST00000384549 92 ntBASIC-2.19□□□□□ -2.76
RHBDD3Q9Y3P4 RNU6-520P-201ENST00000384717 104 ntBASIC-2.19□□□□□ -2.76
RHBDD3Q9Y3P4 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.19□□□□□ -2.76
RHBDD3Q9Y3P4 MIR466-201ENST00000580653 84 ntBASIC-2.19□□□□□ -2.76
RHBDD3Q9Y3P4 MIR1297-201ENST00000637311 77 ntBASIC-2.19□□□□□ -2.76
RHBDD3Q9Y3P4 MIR202-201ENST00000362219 110 ntBASIC-2.2□□□□□ -2.76
RHBDD3Q9Y3P4 SNORA63.4-201ENST00000362763 126 ntBASIC-2.2□□□□□ -2.76
RHBDD3Q9Y3P4 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.2□□□□□ -2.76
RHBDD3Q9Y3P4 RNY1P5-201ENST00000383890 115 ntBASIC-2.2□□□□□ -2.76
RHBDD3Q9Y3P4 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.2□□□□□ -2.76
RHBDD3Q9Y3P4 AC097484.2-201ENST00000509147 251 ntBASIC-2.2□□□□□ -2.76
RHBDD3Q9Y3P4 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.2□□□□□ -2.76
RHBDD3Q9Y3P4 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.22□□□□□ -2.76
RHBDD3Q9Y3P4 FTX_4.1-201ENST00000616291 147 ntBASIC-2.22□□□□□ -2.76
RHBDD3Q9Y3P4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.22□□□□□ -2.76
RHBDD3Q9Y3P4 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.23□□□□□ -2.77
RHBDD3Q9Y3P4 RNU6-755P-201ENST00000364400 103 ntBASIC-2.23□□□□□ -2.77
RHBDD3Q9Y3P4 RNU6-649P-201ENST00000384463 107 ntBASIC-2.23□□□□□ -2.77
RHBDD3Q9Y3P4 MT-TG-201ENST00000387429 68 ntBASIC-2.23□□□□□ -2.77
RHBDD3Q9Y3P4 MALAT1.1-201ENST00000618249 95 ntBASIC-2.23□□□□□ -2.77
RHBDD3Q9Y3P4 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.24□□□□□ -2.77
RHBDD3Q9Y3P4 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.24□□□□□ -2.77
RHBDD3Q9Y3P4 MIR548N-201ENST00000408742 75 ntBASIC-2.24□□□□□ -2.77
RHBDD3Q9Y3P4 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.24□□□□□ -2.77
RHBDD3Q9Y3P4 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.24□□□□□ -2.77
RHBDD3Q9Y3P4 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.24□□□□□ -2.77
RHBDD3Q9Y3P4 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.24□□□□□ -2.77
RHBDD3Q9Y3P4 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.24□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms