Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNU6-1133P-201ENST00000410963 100 ntBASIC0.92□□□□□ -2.26
COL17A1Q9UMD9 RNY1P9-201ENST00000532431 109 ntBASIC0.92□□□□□ -2.26
COL17A1Q9UMD9 MIR4514-201ENST00000581410 57 ntBASIC0.92□□□□□ -2.26
COL17A1Q9UMD9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL17A1Q9UMD9 snoU13.19-201ENST00000459148 104 ntBASIC0.91□□□□□ -2.26
COL17A1Q9UMD9 MIR4636-201ENST00000582271 80 ntBASIC0.91□□□□□ -2.26
COL17A1Q9UMD9 MIR499B-201ENST00000636498 73 ntBASIC0.91□□□□□ -2.26
COL17A1Q9UMD9 MIR760-201ENST00000390220 80 ntBASIC0.9□□□□□ -2.27
COL17A1Q9UMD9 SNORA17.4-201ENST00000391287 132 ntBASIC0.9□□□□□ -2.27
COL17A1Q9UMD9 RNA5SP169-201ENST00000517268 117 ntBASIC0.9□□□□□ -2.27
COL17A1Q9UMD9 MIR8068-201ENST00000618032 68 ntBASIC0.89□□□□□ -2.27
COL17A1Q9UMD9 MIR106A-201ENST00000384870 81 ntBASIC0.88□□□□□ -2.27
COL17A1Q9UMD9 MIR876-201ENST00000401147 81 ntBASIC0.88□□□□□ -2.27
COL17A1Q9UMD9 MIR5704-201ENST00000584029 77 ntBASIC0.88□□□□□ -2.27
COL17A1Q9UMD9 MIR124-2-201ENST00000385081 109 ntBASIC0.87□□□□□ -2.27
COL17A1Q9UMD9 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
COL17A1Q9UMD9 SNORA40.8-201ENST00000411034 126 ntBASIC0.87□□□□□ -2.27
COL17A1Q9UMD9 SCARNA11.2-201ENST00000517183 154 ntBASIC0.87□□□□□ -2.27
COL17A1Q9UMD9 AP002795.1-201ENST00000534879 84 ntBASIC0.87□□□□□ -2.27
COL17A1Q9UMD9 MIR518A1-201ENST00000385068 85 ntBASIC0.86□□□□□ -2.27
COL17A1Q9UMD9 RNU7-55P-201ENST00000459426 62 ntBASIC0.86□□□□□ -2.27
COL17A1Q9UMD9 RNU6-973P-201ENST00000364690 107 ntBASIC0.86□□□□□ -2.27
COL17A1Q9UMD9 SNORD115.2-201ENST00000391126 59 ntBASIC0.86□□□□□ -2.27
COL17A1Q9UMD9 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
COL17A1Q9UMD9 RNA5SP98-201ENST00000363158 137 ntBASIC0.84□□□□□ -2.28
COL17A1Q9UMD9 AC096531.1-201ENST00000419107 107 ntBASIC0.84□□□□□ -2.28
COL17A1Q9UMD9 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.28
COL17A1Q9UMD9 RNU7-129P-201ENST00000516128 62 ntBASIC0.84□□□□□ -2.28
COL17A1Q9UMD9 SNORA42.1-201ENST00000363515 137 ntBASIC0.83□□□□□ -2.28
COL17A1Q9UMD9 RNU6-1091P-201ENST00000363945 107 ntBASIC0.83□□□□□ -2.28
COL17A1Q9UMD9 RNA5SP128-201ENST00000365305 116 ntBASIC0.83□□□□□ -2.28
COL17A1Q9UMD9 RNU6-176P-201ENST00000517196 105 ntBASIC0.83□□□□□ -2.28
COL17A1Q9UMD9 RNU6-1233P-201ENST00000362922 102 ntBASIC0.82□□□□□ -2.28
COL17A1Q9UMD9 Y_RNA.134-201ENST00000363435 105 ntBASIC0.82□□□□□ -2.28
COL17A1Q9UMD9 Y_RNA.382-201ENST00000365672 114 ntBASIC0.82□□□□□ -2.28
COL17A1Q9UMD9 RNU6-608P-201ENST00000383927 104 ntBASIC0.82□□□□□ -2.28
COL17A1Q9UMD9 RNU6-30P-201ENST00000384561 107 ntBASIC0.8□□□□□ -2.28
COL17A1Q9UMD9 Z95118.1-201ENST00000421372 247 ntBASIC0.8□□□□□ -2.28
COL17A1Q9UMD9 RNU6-848P-201ENST00000515948 107 ntBASIC0.8□□□□□ -2.28
COL17A1Q9UMD9 RNU6-617P-201ENST00000516147 107 ntBASIC0.8□□□□□ -2.28
COL17A1Q9UMD9 RNU6-473P-201ENST00000516164 107 ntBASIC0.8□□□□□ -2.28
COL17A1Q9UMD9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.8□□□□□ -2.28
COL17A1Q9UMD9 RNA5SP67-201ENST00000516422 131 ntBASIC0.8□□□□□ -2.28
COL17A1Q9UMD9 MIR6718-201ENST00000616153 80 ntBASIC0.8□□□□□ -2.28
COL17A1Q9UMD9 MIR548T-201ENST00000408369 74 ntBASIC0.8□□□□□ -2.28
COL17A1Q9UMD9 RNU6-900P-201ENST00000384498 102 ntBASIC0.79□□□□□ -2.28
COL17A1Q9UMD9 Y_RNA.519-201ENST00000384553 102 ntBASIC0.79□□□□□ -2.28
COL17A1Q9UMD9 MIR643-201ENST00000385267 97 ntBASIC0.79□□□□□ -2.28
COL17A1Q9UMD9 RNU6-863P-201ENST00000515989 104 ntBASIC0.79□□□□□ -2.28
COL17A1Q9UMD9 SNORA62.5-201ENST00000516634 120 ntBASIC0.79□□□□□ -2.28
COL17A1Q9UMD9 MIR6854-201ENST00000614935 69 ntBASIC0.79□□□□□ -2.28
COL17A1Q9UMD9 SNORD60-201ENST00000383903 83 ntBASIC0.77□□□□□ -2.29
COL17A1Q9UMD9 RNU6-455P-201ENST00000384681 107 ntBASIC0.77□□□□□ -2.29
COL17A1Q9UMD9 AC108740.1-201ENST00000498629 225 ntBASIC0.77□□□□□ -2.29
COL17A1Q9UMD9 MIR92A1-201ENST00000385233 78 ntBASIC0.76□□□□□ -2.29
COL17A1Q9UMD9 MIR5683-201ENST00000636514 76 ntBASIC0.76□□□□□ -2.29
COL17A1Q9UMD9 AC114755.3-201ENST00000481111 251 ntBASIC0.74□□□□□ -2.29
COL17A1Q9UMD9 MIR5087-201ENST00000635826 76 ntBASIC0.74□□□□□ -2.29
COL17A1Q9UMD9 Y_RNA.320-201ENST00000365144 102 ntBASIC0.73□□□□□ -2.29
COL17A1Q9UMD9 MIR548N-201ENST00000408742 75 ntBASIC0.73□□□□□ -2.29
COL17A1Q9UMD9 MIR5589-201ENST00000579442 60 ntBASIC0.73□□□□□ -2.29
COL17A1Q9UMD9 MIR581-201ENST00000384895 96 ntBASIC0.73□□□□□ -2.29
COL17A1Q9UMD9 MIR4802-201ENST00000581881 80 ntBASIC0.73□□□□□ -2.29
COL17A1Q9UMD9 AC013734.1-201ENST00000619329 111 ntBASIC0.72□□□□□ -2.29
COL17A1Q9UMD9 SNORD114-15-201ENST00000364687 72 ntBASIC0.71□□□□□ -2.3
COL17A1Q9UMD9 SNORD56B-201ENST00000384713 71 ntBASIC0.71□□□□□ -2.3
COL17A1Q9UMD9 RPL35AP4-201ENST00000412007 102 ntBASIC0.71□□□□□ -2.3
COL17A1Q9UMD9 MIR6514-201ENST00000622549 70 ntBASIC0.71□□□□□ -2.3
COL17A1Q9UMD9 RNU6-901P-201ENST00000384593 106 ntBASIC0.7□□□□□ -2.3
COL17A1Q9UMD9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.7□□□□□ -2.3
COL17A1Q9UMD9 uc_338.17-201ENST00000619633 179 ntBASIC0.7□□□□□ -2.3
COL17A1Q9UMD9 AC114737.2-201ENST00000421583 173 ntBASIC0.69□□□□□ -2.3
COL17A1Q9UMD9 SNORD44.1-201ENST00000363202 61 ntBASIC0.68□□□□□ -2.3
COL17A1Q9UMD9 Y_RNA.223-201ENST00000364290 113 ntBASIC0.68□□□□□ -2.3
COL17A1Q9UMD9 AL353691.2-201ENST00000443795 59 ntBASIC0.68□□□□□ -2.3
COL17A1Q9UMD9 RNU6-836P-201ENST00000362920 107 ntBASIC0.67□□□□□ -2.3
COL17A1Q9UMD9 RNU6-127P-201ENST00000390897 107 ntBASIC0.67□□□□□ -2.3
COL17A1Q9UMD9 RNU6-68P-201ENST00000516576 104 ntBASIC0.67□□□□□ -2.3
COL17A1Q9UMD9 MIR4723-201ENST00000585070 81 ntBASIC0.67□□□□□ -2.3
COL17A1Q9UMD9 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.67□□□□□ -2.3
COL17A1Q9UMD9 U6.97-201ENST00000636904 101 ntBASIC0.67□□□□□ -2.3
COL17A1Q9UMD9 SNORA26.4-201ENST00000391188 123 ntBASIC0.67□□□□□ -2.3
COL17A1Q9UMD9 SNORD18.2-201ENST00000459604 70 ntBASIC0.66□□□□□ -2.3
COL17A1Q9UMD9 AC104692.1-201ENST00000472406 90 ntBASIC0.66□□□□□ -2.3
COL17A1Q9UMD9 AL445193.1-201ENST00000441183 141 ntBASIC0.65□□□□□ -2.31
COL17A1Q9UMD9 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.65□□□□□ -2.31
COL17A1Q9UMD9 MIR103A1-201ENST00000362165 78 ntBASIC0.63□□□□□ -2.31
COL17A1Q9UMD9 RNA5SP163-201ENST00000410304 99 ntBASIC0.63□□□□□ -2.31
COL17A1Q9UMD9 Y_RNA.603-201ENST00000410571 108 ntBASIC0.63□□□□□ -2.31
COL17A1Q9UMD9 CR383656.4-201ENST00000546909 122 ntBASIC0.63□□□□□ -2.31
COL17A1Q9UMD9 MIR4280-201ENST00000582178 76 ntBASIC0.63□□□□□ -2.31
COL17A1Q9UMD9 Y_RNA.129-201ENST00000363392 110 ntBASIC0.62□□□□□ -2.31
COL17A1Q9UMD9 SNORD115-33-201ENST00000363723 82 ntBASIC0.62□□□□□ -2.31
COL17A1Q9UMD9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.62□□□□□ -2.31
COL17A1Q9UMD9 RNA5SP224-201ENST00000365069 126 ntBASIC0.61□□□□□ -2.31
COL17A1Q9UMD9 Y_RNA.406-201ENST00000383984 100 ntBASIC0.61□□□□□ -2.31
COL17A1Q9UMD9 RNU6-815P-201ENST00000384080 113 ntBASIC0.61□□□□□ -2.31
COL17A1Q9UMD9 SNORD38.3-201ENST00000516599 73 ntBASIC0.61□□□□□ -2.31
COL17A1Q9UMD9 Y_RNA.260-201ENST00000364628 101 ntBASIC0.6□□□□□ -2.31
COL17A1Q9UMD9 RNU6-563P-201ENST00000364872 108 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 290.5 ms