Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.57□□□□□ -2.5
LIMA1Q9UHB6 RNU6-540P-201ENST00000384622 101 ntBASIC-0.57□□□□□ -2.5
LIMA1Q9UHB6 MIR630-201ENST00000384957 97 ntBASIC-0.57□□□□□ -2.5
LIMA1Q9UHB6 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.57□□□□□ -2.5
LIMA1Q9UHB6 SNORD18.2-201ENST00000459604 70 ntBASIC-0.57□□□□□ -2.5
LIMA1Q9UHB6 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.58□□□□□ -2.5
LIMA1Q9UHB6 RNA5SP331-201ENST00000364986 107 ntBASIC-0.58□□□□□ -2.5
LIMA1Q9UHB6 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.58□□□□□ -2.5
LIMA1Q9UHB6 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.58□□□□□ -2.5
LIMA1Q9UHB6 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.58□□□□□ -2.5
LIMA1Q9UHB6 RNU6-924P-201ENST00000362926 108 ntBASIC-0.59□□□□□ -2.5
LIMA1Q9UHB6 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.59□□□□□ -2.5
LIMA1Q9UHB6 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.6□□□□□ -2.51
LIMA1Q9UHB6 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.61□□□□□ -2.51
LIMA1Q9UHB6 SNORA72.7-201ENST00000516349 94 ntBASIC-0.61□□□□□ -2.51
LIMA1Q9UHB6 RNU6-458P-201ENST00000384179 107 ntBASIC-0.62□□□□□ -2.51
LIMA1Q9UHB6 SNORD113-2-201ENST00000391082 72 ntBASIC-0.62□□□□□ -2.51
LIMA1Q9UHB6 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.62□□□□□ -2.51
LIMA1Q9UHB6 U7.5-201ENST00000517224 61 ntBASIC-0.62□□□□□ -2.51
LIMA1Q9UHB6 U6.58-201ENST00000613107 107 ntBASIC-0.62□□□□□ -2.51
LIMA1Q9UHB6 SNORD114-17-201ENST00000364699 75 ntBASIC-0.63□□□□□ -2.51
LIMA1Q9UHB6 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.63□□□□□ -2.51
LIMA1Q9UHB6 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.64□□□□□ -2.51
LIMA1Q9UHB6 MIR587-201ENST00000384845 96 ntBASIC-0.64□□□□□ -2.51
LIMA1Q9UHB6 MIR527-201ENST00000385244 85 ntBASIC-0.64□□□□□ -2.51
LIMA1Q9UHB6 RNU6-663P-201ENST00000391105 106 ntBASIC-0.64□□□□□ -2.51
LIMA1Q9UHB6 RNU7-88P-201ENST00000458752 63 ntBASIC-0.64□□□□□ -2.51
LIMA1Q9UHB6 MIR4324-201ENST00000584846 72 ntBASIC-0.64□□□□□ -2.51
LIMA1Q9UHB6 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.65□□□□□ -2.51
LIMA1Q9UHB6 RNU6-10P-201ENST00000384036 107 ntBASIC-0.65□□□□□ -2.51
LIMA1Q9UHB6 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.65□□□□□ -2.51
LIMA1Q9UHB6 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.65□□□□□ -2.51
LIMA1Q9UHB6 SNORA41B-201ENST00000384785 128 ntBASIC-0.65□□□□□ -2.51
LIMA1Q9UHB6 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
LIMA1Q9UHB6 SNX3P1X-201ENST00000414887 175 ntBASIC-0.65□□□□□ -2.51
LIMA1Q9UHB6 SCARNA17-201ENST00000516183 144 ntBASIC-0.65□□□□□ -2.51
LIMA1Q9UHB6 MIR6738-201ENST00000619620 64 ntBASIC-0.65□□□□□ -2.51
LIMA1Q9UHB6 RNU6-776P-201ENST00000364403 104 ntBASIC-0.66□□□□□ -2.52
LIMA1Q9UHB6 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.66□□□□□ -2.52
LIMA1Q9UHB6 RNU6-732P-201ENST00000516033 103 ntBASIC-0.66□□□□□ -2.52
LIMA1Q9UHB6 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.67□□□□□ -2.52
LIMA1Q9UHB6 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.67□□□□□ -2.52
LIMA1Q9UHB6 SNORA26.4-201ENST00000391188 123 ntBASIC-0.67□□□□□ -2.52
LIMA1Q9UHB6 RNU6-542P-201ENST00000516405 103 ntBASIC-0.67□□□□□ -2.52
LIMA1Q9UHB6 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.67□□□□□ -2.52
LIMA1Q9UHB6 MIR4320-201ENST00000636981 65 ntBASIC-0.67□□□□□ -2.52
LIMA1Q9UHB6 SNORD116-16-201ENST00000384533 92 ntBASIC-0.68□□□□□ -2.52
LIMA1Q9UHB6 MIR1468-201ENST00000410600 86 ntBASIC-0.68□□□□□ -2.52
LIMA1Q9UHB6 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.68□□□□□ -2.52
LIMA1Q9UHB6 RNU6-431P-201ENST00000383874 107 ntBASIC-0.69□□□□□ -2.52
LIMA1Q9UHB6 RNU6-630P-201ENST00000391258 106 ntBASIC-0.69□□□□□ -2.52
LIMA1Q9UHB6 RNU6-871P-201ENST00000516122 100 ntBASIC-0.69□□□□□ -2.52
LIMA1Q9UHB6 SNORD63.1-201ENST00000516178 80 ntBASIC-0.69□□□□□ -2.52
LIMA1Q9UHB6 MIR4662A-201ENST00000637499 67 ntBASIC-0.69□□□□□ -2.52
LIMA1Q9UHB6 RNU6-598P-201ENST00000364017 105 ntBASIC-0.7□□□□□ -2.52
LIMA1Q9UHB6 MIR147A-201ENST00000385079 72 ntBASIC-0.7□□□□□ -2.52
LIMA1Q9UHB6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
LIMA1Q9UHB6 SNORD115-33-201ENST00000363723 82 ntBASIC-0.71□□□□□ -2.52
LIMA1Q9UHB6 MIR196A1-201ENST00000388006 70 ntBASIC-0.71□□□□□ -2.52
LIMA1Q9UHB6 SNORD19-201ENST00000391191 68 ntBASIC-0.71□□□□□ -2.52
LIMA1Q9UHB6 SNORD30.1-201ENST00000391309 70 ntBASIC-0.71□□□□□ -2.52
LIMA1Q9UHB6 SNORA25.4-201ENST00000363666 124 ntBASIC-0.72□□□□□ -2.52
LIMA1Q9UHB6 SNORD64-201ENST00000386683 67 ntBASIC-0.72□□□□□ -2.52
LIMA1Q9UHB6 RNU6-696P-201ENST00000390834 107 ntBASIC-0.72□□□□□ -2.52
LIMA1Q9UHB6 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.72□□□□□ -2.52
LIMA1Q9UHB6 AP002795.1-201ENST00000534879 84 ntBASIC-0.72□□□□□ -2.52
LIMA1Q9UHB6 AC005520.4-201ENST00000604337 90 ntBASIC-0.72□□□□□ -2.52
LIMA1Q9UHB6 MIR429-201ENST00000362106 83 ntBASIC-0.73□□□□□ -2.53
LIMA1Q9UHB6 RNA5SP461-201ENST00000516451 104 ntBASIC-0.73□□□□□ -2.53
LIMA1Q9UHB6 U2.18-201ENST00000622185 84 ntBASIC-0.73□□□□□ -2.53
LIMA1Q9UHB6 U6.111-201ENST00000636093 83 ntBASIC-0.73□□□□□ -2.53
LIMA1Q9UHB6 SNORD1B-201ENST00000363091 84 ntBASIC-0.74□□□□□ -2.53
LIMA1Q9UHB6 SNORD114-25-201ENST00000363742 72 ntBASIC-0.74□□□□□ -2.53
LIMA1Q9UHB6 RNU6-649P-201ENST00000384463 107 ntBASIC-0.74□□□□□ -2.53
LIMA1Q9UHB6 RNU6-92P-201ENST00000605893 104 ntBASIC-0.74□□□□□ -2.53
LIMA1Q9UHB6 MIR601-201ENST00000385256 79 ntBASIC-0.75□□□□□ -2.53
LIMA1Q9UHB6 RNU6-539P-201ENST00000516665 103 ntBASIC-0.75□□□□□ -2.53
LIMA1Q9UHB6 AL353691.2-201ENST00000443795 59 ntBASIC-0.76□□□□□ -2.53
LIMA1Q9UHB6 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.76□□□□□ -2.53
LIMA1Q9UHB6 MIR3115-201ENST00000577915 68 ntBASIC-0.77□□□□□ -2.53
LIMA1Q9UHB6 MIR382-201ENST00000637119 76 ntBASIC-0.77□□□□□ -2.53
LIMA1Q9UHB6 SNORD60.1-201ENST00000362451 73 ntBASIC-0.78□□□□□ -2.53
LIMA1Q9UHB6 AL500527.2-201ENST00000454105 95 ntBASIC-0.78□□□□□ -2.53
LIMA1Q9UHB6 RNU6-638P-201ENST00000516582 104 ntBASIC-0.79□□□□□ -2.54
LIMA1Q9UHB6 MIR4511-201ENST00000582784 87 ntBASIC-0.79□□□□□ -2.54
LIMA1Q9UHB6 U4.2-201ENST00000618561 85 ntBASIC-0.79□□□□□ -2.54
LIMA1Q9UHB6 SNORD83B-201ENST00000386745 93 ntBASIC-0.8□□□□□ -2.54
LIMA1Q9UHB6 MIR378F-201ENST00000578143 78 ntBASIC-0.8□□□□□ -2.54
LIMA1Q9UHB6 RNA5SP192-201ENST00000364404 120 ntBASIC-0.81□□□□□ -2.54
LIMA1Q9UHB6 RNU6-800P-201ENST00000384473 103 ntBASIC-0.81□□□□□ -2.54
LIMA1Q9UHB6 MIR4723-201ENST00000585070 81 ntBASIC-0.81□□□□□ -2.54
LIMA1Q9UHB6 MIR5683-201ENST00000636514 76 ntBASIC-0.81□□□□□ -2.54
LIMA1Q9UHB6 SNORA25.5-201ENST00000363782 126 ntBASIC-0.82□□□□□ -2.54
LIMA1Q9UHB6 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.82□□□□□ -2.54
LIMA1Q9UHB6 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.82□□□□□ -2.54
LIMA1Q9UHB6 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.82□□□□□ -2.54
LIMA1Q9UHB6 MIR198-201ENST00000637333 62 ntBASIC-0.83□□□□□ -2.54
LIMA1Q9UHB6 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.84□□□□□ -2.54
LIMA1Q9UHB6 MIR520D-201ENST00000385002 87 ntBASIC-0.84□□□□□ -2.54
LIMA1Q9UHB6 MIR548Q-201ENST00000408404 100 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 300.4 ms