Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU7-61P-201ENST00000515897 61 ntBASIC-5.6□□□□□ -3.31
LINC00643Q86TS7 RNU6-1325P-201ENST00000364905 105 ntBASIC-5.62□□□□□ -3.31
LINC00643Q86TS7 RNU6-1227P-201ENST00000383981 107 ntBASIC-5.62□□□□□ -3.31
LINC00643Q86TS7 SNORA40B-201ENST00000385573 128 ntBASIC-5.62□□□□□ -3.31
LINC00643Q86TS7 RNU6-904P-201ENST00000516206 101 ntBASIC-5.64□□□□□ -3.31
LINC00643Q86TS7 RNU6-92P-201ENST00000605893 104 ntBASIC-5.64□□□□□ -3.31
LINC00643Q86TS7 Y_RNA.17-201ENST00000362433 111 ntBASIC-5.65□□□□□ -3.31
LINC00643Q86TS7 Y_RNA.137-201ENST00000363455 112 ntBASIC-5.65□□□□□ -3.31
LINC00643Q86TS7 Y_RNA.532-201ENST00000384590 113 ntBASIC-5.65□□□□□ -3.31
LINC00643Q86TS7 TMSB4XP3-201ENST00000445144 114 ntBASIC-5.65□□□□□ -3.31
LINC00643Q86TS7 RNU6-1211P-201ENST00000459179 105 ntBASIC-5.65□□□□□ -3.31
LINC00643Q86TS7 AC093729.1-201ENST00000513074 128 ntBASIC-5.66□□□□□ -3.32
LINC00643Q86TS7 Y_RNA.680-201ENST00000516441 93 ntBASIC-5.66□□□□□ -3.32
LINC00643Q86TS7 U6.104-201ENST00000637979 90 ntBASIC-5.66□□□□□ -3.32
LINC00643Q86TS7 RNU6-713P-201ENST00000384761 107 ntBASIC-5.67□□□□□ -3.32
LINC00643Q86TS7 RNU6-162P-201ENST00000516228 103 ntBASIC-5.67□□□□□ -3.32
LINC00643Q86TS7 MIR4484-201ENST00000582855 83 ntBASIC-5.67□□□□□ -3.32
LINC00643Q86TS7 MIR1297-201ENST00000637311 77 ntBASIC-5.67□□□□□ -3.32
LINC00643Q86TS7 SNORA63-201ENST00000363450 132 ntBASIC-5.68□□□□□ -3.32
LINC00643Q86TS7 Y_RNA.586-201ENST00000391146 98 ntBASIC-5.69□□□□□ -3.32
LINC00643Q86TS7 MTATP8P2-201ENST00000435212 202 ntBASIC-5.69□□□□□ -3.32
LINC00643Q86TS7 MIRLET7A1-201ENST00000362295 80 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 RNU6-718P-201ENST00000516166 105 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 SNORA81.3-201ENST00000517283 198 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 AC062037.1-201ENST00000605302 128 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 AP001318.4-201ENST00000616637 121 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 Y_RNA.778-201ENST00000620203 90 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 RNU6-633P-201ENST00000362612 103 ntBASIC-5.71□□□□□ -3.32
LINC00643Q86TS7 Y_RNA.579-201ENST00000390939 94 ntBASIC-5.71□□□□□ -3.32
LINC00643Q86TS7 U7.3-201ENST00000616123 62 ntBASIC-5.71□□□□□ -3.32
LINC00643Q86TS7 Y_RNA.70-201ENST00000362886 110 ntBASIC-5.72□□□□□ -3.33
LINC00643Q86TS7 RNU6-1020P-201ENST00000363684 107 ntBASIC-5.72□□□□□ -3.33
LINC00643Q86TS7 RNU6-659P-201ENST00000516454 104 ntBASIC-5.72□□□□□ -3.33
LINC00643Q86TS7 SNORD115-45-201ENST00000391078 81 ntBASIC-5.73□□□□□ -3.33
LINC00643Q86TS7 RNU6-1161P-201ENST00000516176 102 ntBASIC-5.73□□□□□ -3.33
LINC00643Q86TS7 AL157777.2-201ENST00000258070 137 ntBASIC-5.74□□□□□ -3.33
LINC00643Q86TS7 Y_RNA.43-201ENST00000362670 111 ntBASIC-5.74□□□□□ -3.33
LINC00643Q86TS7 Y_RNA.158-201ENST00000363651 101 ntBASIC-5.74□□□□□ -3.33
LINC00643Q86TS7 SNORD60.1-201ENST00000362451 73 ntBASIC-5.75□□□□□ -3.33
LINC00643Q86TS7 RNU6-1135P-201ENST00000411083 103 ntBASIC-5.75□□□□□ -3.33
LINC00643Q86TS7 RNU6-742P-201ENST00000365289 107 ntBASIC-5.76□□□□□ -3.33
LINC00643Q86TS7 MIR656-201ENST00000385224 78 ntBASIC-5.76□□□□□ -3.33
LINC00643Q86TS7 AC139453.2-201ENST00000487255 133 ntBASIC-5.76□□□□□ -3.33
LINC00643Q86TS7 RNU6-772P-201ENST00000516042 105 ntBASIC-5.77□□□□□ -3.33
LINC00643Q86TS7 Y_RNA.219-201ENST00000364232 113 ntBASIC-5.78□□□□□ -3.33
LINC00643Q86TS7 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-5.78□□□□□ -3.33
LINC00643Q86TS7 MIR548AI-201ENST00000579940 88 ntBASIC-5.78□□□□□ -3.33
LINC00643Q86TS7 Y_RNA.459-201ENST00000384251 102 ntBASIC-5.79□□□□□ -3.34
LINC00643Q86TS7 RNU6-542P-201ENST00000516405 103 ntBASIC-5.79□□□□□ -3.34
LINC00643Q86TS7 Y_RNA.382-201ENST00000365672 114 ntBASIC-5.8□□□□□ -3.34
LINC00643Q86TS7 RNU6-196P-201ENST00000384315 107 ntBASIC-5.8□□□□□ -3.34
LINC00643Q86TS7 RNU6-1340P-201ENST00000384438 107 ntBASIC-5.8□□□□□ -3.34
LINC00643Q86TS7 AC139792.2-201ENST00000624218 587 ntBASIC-5.8□□□□□ -3.34
LINC00643Q86TS7 MIR3974-201ENST00000637126 96 ntBASIC-5.8□□□□□ -3.34
LINC00643Q86TS7 RNU6-854P-201ENST00000364036 107 ntBASIC-5.81□□□□□ -3.34
LINC00643Q86TS7 RNU6-1124P-201ENST00000384169 107 ntBASIC-5.81□□□□□ -3.34
LINC00643Q86TS7 MIR548F1-201ENST00000408667 84 ntBASIC-5.81□□□□□ -3.34
LINC00643Q86TS7 MTND3P3-201ENST00000505004 126 ntBASIC-5.81□□□□□ -3.34
LINC00643Q86TS7 SNORA40.16-201ENST00000517238 121 ntBASIC-5.81□□□□□ -3.34
LINC00643Q86TS7 SNORD58.1-201ENST00000391313 66 ntBASIC-5.83□□□□□ -3.34
LINC00643Q86TS7 AC022559.1-201ENST00000520905 205 ntBASIC-5.83□□□□□ -3.34
LINC00643Q86TS7 Y_RNA.107-201ENST00000363190 121 ntBASIC-5.84□□□□□ -3.34
LINC00643Q86TS7 MT-TL1-201ENST00000386347 75 ntBASIC-5.84□□□□□ -3.34
LINC00643Q86TS7 Y_RNA.202-201ENST00000364083 110 ntBASIC-5.85□□□□□ -3.35
LINC00643Q86TS7 Y_RNA.272-201ENST00000364696 102 ntBASIC-5.85□□□□□ -3.35
LINC00643Q86TS7 SNORA33.2-201ENST00000365413 134 ntBASIC-5.85□□□□□ -3.35
LINC00643Q86TS7 SNORD116-24-201ENST00000384549 92 ntBASIC-5.85□□□□□ -3.35
LINC00643Q86TS7 RNU6-380P-201ENST00000410207 107 ntBASIC-5.85□□□□□ -3.35
LINC00643Q86TS7 AC141273.2-201ENST00000618989 130 ntBASIC-5.86□□□□□ -3.35
LINC00643Q86TS7 MIR4668-201ENST00000582284 70 ntBASIC-5.87□□□□□ -3.35
LINC00643Q86TS7 MIR664A-201ENST00000626086 82 ntBASIC-5.87□□□□□ -3.35
LINC00643Q86TS7 RNU6-895P-201ENST00000384125 103 ntBASIC-5.88□□□□□ -3.35
LINC00643Q86TS7 MIR8062-201ENST00000621515 85 ntBASIC-5.88□□□□□ -3.35
LINC00643Q86TS7 Y_RNA.717-201ENST00000517106 92 ntBASIC-5.89□□□□□ -3.35
LINC00643Q86TS7 MIR548X2-201ENST00000579776 100 ntBASIC-5.89□□□□□ -3.35
LINC00643Q86TS7 Y_RNA.218-201ENST00000364218 104 ntBASIC-5.91□□□□□ -3.36
LINC00643Q86TS7 MIR124-1-201ENST00000385275 85 ntBASIC-5.91□□□□□ -3.36
LINC00643Q86TS7 RNU7-119P-201ENST00000459279 63 ntBASIC-5.91□□□□□ -3.36
LINC00643Q86TS7 Y_RNA.260-201ENST00000364628 101 ntBASIC-5.92□□□□□ -3.36
LINC00643Q86TS7 RNU4-71P-201ENST00000516258 113 ntBASIC-5.92□□□□□ -3.36
LINC00643Q86TS7 Y_RNA.93-201ENST00000363066 109 ntBASIC-5.93□□□□□ -3.36
LINC00643Q86TS7 RNU6-665P-201ENST00000384639 107 ntBASIC-5.93□□□□□ -3.36
LINC00643Q86TS7 MIR590-201ENST00000385008 97 ntBASIC-5.93□□□□□ -3.36
LINC00643Q86TS7 RNA5SP224-201ENST00000365069 126 ntBASIC-5.94□□□□□ -3.36
LINC00643Q86TS7 SNORD45C-201ENST00000383893 79 ntBASIC-5.94□□□□□ -3.36
LINC00643Q86TS7 MIR4680-201ENST00000580906 66 ntBASIC-5.94□□□□□ -3.36
LINC00643Q86TS7 RNU6-1107P-201ENST00000364817 104 ntBASIC-5.96□□□□□ -3.36
LINC00643Q86TS7 Y_RNA.206-201ENST00000364136 102 ntBASIC-5.97□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.240-201ENST00000364469 95 ntBASIC-5.97□□□□□ -3.37
LINC00643Q86TS7 SNORD42.2-201ENST00000365570 69 ntBASIC-5.97□□□□□ -3.37
LINC00643Q86TS7 AC072026.1-201ENST00000605023 201 ntBASIC-5.97□□□□□ -3.37
LINC00643Q86TS7 RNY3P1-201ENST00000365085 102 ntBASIC-5.98□□□□□ -3.37
LINC00643Q86TS7 RNU6-1241P-201ENST00000384536 107 ntBASIC-5.99□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.620-201ENST00000411009 88 ntBASIC-6□□□□□ -3.37
LINC00643Q86TS7 RNU6-419P-201ENST00000517030 63 ntBASIC-6□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.20-201ENST00000362479 113 ntBASIC-6.01□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.544-201ENST00000384650 113 ntBASIC-6.01□□□□□ -3.37
LINC00643Q86TS7 SNORD33.1-201ENST00000516213 88 ntBASIC-6.01□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.194-201ENST00000363985 102 ntBASIC-6.02□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.290-201ENST00000364879 114 ntBASIC-6.02□□□□□ -3.37
Retrieved 100 of 98,524 protein–RNA pairs in 273.7 ms