Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SNORA62.4-201ENST00000365504 151 ntBASIC-0.12□□□□□ -2.43
KRT40Q6A162 SNORD116-16-201ENST00000384533 92 ntBASIC-0.12□□□□□ -2.43
KRT40Q6A162 MIR527-201ENST00000385244 85 ntBASIC-0.12□□□□□ -2.43
KRT40Q6A162 RNU6-122P-201ENST00000516818 107 ntBASIC-0.12□□□□□ -2.43
KRT40Q6A162 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.13□□□□□ -2.43
KRT40Q6A162 SNORD114-12-201ENST00000365400 75 ntBASIC-0.13□□□□□ -2.43
KRT40Q6A162 RNY1P9-201ENST00000532431 109 ntBASIC-0.13□□□□□ -2.43
KRT40Q6A162 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.14□□□□□ -2.43
KRT40Q6A162 SNORA18.1-201ENST00000363418 128 ntBASIC-0.14□□□□□ -2.43
KRT40Q6A162 RNU6-458P-201ENST00000384179 107 ntBASIC-0.14□□□□□ -2.43
KRT40Q6A162 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
KRT40Q6A162 U6.58-201ENST00000613107 107 ntBASIC-0.14□□□□□ -2.43
KRT40Q6A162 MIR6851-201ENST00000617060 67 ntBASIC-0.16□□□□□ -2.44
KRT40Q6A162 MIR1295B-201ENST00000636144 60 ntBASIC-0.16□□□□□ -2.44
KRT40Q6A162 SNORD4A-201ENST00000459174 72 ntBASIC-0.17□□□□□ -2.44
KRT40Q6A162 SNORD38.3-201ENST00000516599 73 ntBASIC-0.17□□□□□ -2.44
KRT40Q6A162 RNU6-940P-201ENST00000363433 104 ntBASIC-0.18□□□□□ -2.44
KRT40Q6A162 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.18□□□□□ -2.44
KRT40Q6A162 RNA5SP66-201ENST00000517178 101 ntBASIC-0.18□□□□□ -2.44
KRT40Q6A162 MIR466-201ENST00000580653 84 ntBASIC-0.18□□□□□ -2.44
KRT40Q6A162 MIR3666-201ENST00000607845 111 ntBASIC-0.18□□□□□ -2.44
KRT40Q6A162 MIR8064-201ENST00000612863 90 ntBASIC-0.2□□□□□ -2.44
KRT40Q6A162 MIR124-2-201ENST00000385081 109 ntBASIC-0.21□□□□□ -2.44
KRT40Q6A162 SNORD1B-201ENST00000363091 84 ntBASIC-0.22□□□□□ -2.44
KRT40Q6A162 SNORD114-11-201ENST00000363738 75 ntBASIC-0.22□□□□□ -2.44
KRT40Q6A162 RNA5SP300-201ENST00000391197 107 ntBASIC-0.22□□□□□ -2.44
KRT40Q6A162 U7.5-201ENST00000517224 61 ntBASIC-0.22□□□□□ -2.44
KRT40Q6A162 MIR4263-201ENST00000584745 83 ntBASIC-0.22□□□□□ -2.44
KRT40Q6A162 RNU6-598P-201ENST00000364017 105 ntBASIC-0.23□□□□□ -2.45
KRT40Q6A162 AC093726.3-201ENST00000637588 150 ntBASIC-0.23□□□□□ -2.45
KRT40Q6A162 MIR4788-201ENST00000639104 80 ntBASIC-0.23□□□□□ -2.45
KRT40Q6A162 RNU7-88P-201ENST00000458752 63 ntBASIC-0.24□□□□□ -2.45
KRT40Q6A162 RNA5SP169-201ENST00000517268 117 ntBASIC-0.24□□□□□ -2.45
KRT40Q6A162 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.25□□□□□ -2.45
KRT40Q6A162 RNU6-320P-201ENST00000516511 106 ntBASIC-0.25□□□□□ -2.45
KRT40Q6A162 MIR3938-201ENST00000582157 103 ntBASIC-0.25□□□□□ -2.45
KRT40Q6A162 U2.18-201ENST00000622185 84 ntBASIC-0.26□□□□□ -2.45
KRT40Q6A162 MIR429-201ENST00000362106 83 ntBASIC-0.27□□□□□ -2.45
KRT40Q6A162 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.27□□□□□ -2.45
KRT40Q6A162 MIR198-201ENST00000637333 62 ntBASIC-0.27□□□□□ -2.45
KRT40Q6A162 RNU6-924P-201ENST00000362926 108 ntBASIC-0.28□□□□□ -2.45
KRT40Q6A162 MIR633-201ENST00000384821 98 ntBASIC-0.28□□□□□ -2.45
KRT40Q6A162 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.28□□□□□ -2.45
KRT40Q6A162 RNU4-63P-201ENST00000411313 118 ntBASIC-0.28□□□□□ -2.45
KRT40Q6A162 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.28□□□□□ -2.45
KRT40Q6A162 RNU6-231P-201ENST00000517122 103 ntBASIC-0.28□□□□□ -2.45
KRT40Q6A162 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.28□□□□□ -2.45
KRT40Q6A162 RNU6-446P-201ENST00000362827 106 ntBASIC-0.29□□□□□ -2.46
KRT40Q6A162 RNA5SP275-201ENST00000363936 118 ntBASIC-0.29□□□□□ -2.46
KRT40Q6A162 SNORD22.1-201ENST00000516331 125 ntBASIC-0.29□□□□□ -2.46
KRT40Q6A162 RNU6-696P-201ENST00000390834 107 ntBASIC-0.3□□□□□ -2.46
KRT40Q6A162 RNU6-172P-201ENST00000411000 93 ntBASIC-0.3□□□□□ -2.46
KRT40Q6A162 SNORD14C-201ENST00000365382 88 ntBASIC-0.31□□□□□ -2.46
KRT40Q6A162 MIR518B-201ENST00000385127 83 ntBASIC-0.31□□□□□ -2.46
KRT40Q6A162 MIR601-201ENST00000385256 79 ntBASIC-0.31□□□□□ -2.46
KRT40Q6A162 SNORD74.6-201ENST00000364796 70 ntBASIC-0.32□□□□□ -2.46
KRT40Q6A162 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.33□□□□□ -2.46
KRT40Q6A162 RNU6-732P-201ENST00000516033 103 ntBASIC-0.33□□□□□ -2.46
KRT40Q6A162 RNU6-829P-201ENST00000363700 112 ntBASIC-0.34□□□□□ -2.46
KRT40Q6A162 SNORA32.3-201ENST00000384772 121 ntBASIC-0.34□□□□□ -2.46
KRT40Q6A162 SNORD126-201ENST00000459475 77 ntBASIC-0.34□□□□□ -2.46
KRT40Q6A162 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.34□□□□□ -2.46
KRT40Q6A162 SNORD75.1-201ENST00000408373 60 ntBASIC-0.35□□□□□ -2.47
KRT40Q6A162 AC079150.2-201ENST00000443733 78 ntBASIC-0.35□□□□□ -2.47
KRT40Q6A162 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.35□□□□□ -2.47
KRT40Q6A162 RNU6-499P-201ENST00000365615 107 ntBASIC-0.36□□□□□ -2.47
KRT40Q6A162 RNU6-721P-201ENST00000410155 105 ntBASIC-0.36□□□□□ -2.47
KRT40Q6A162 SNORD18.2-201ENST00000459604 70 ntBASIC-0.36□□□□□ -2.47
KRT40Q6A162 MIR3179-1-201ENST00000578940 84 ntBASIC-0.36□□□□□ -2.47
KRT40Q6A162 MIR3179-2-201ENST00000579107 84 ntBASIC-0.36□□□□□ -2.47
KRT40Q6A162 MIR3179-3-201ENST00000579566 84 ntBASIC-0.36□□□□□ -2.47
KRT40Q6A162 MIR7110-201ENST00000612638 86 ntBASIC-0.36□□□□□ -2.47
KRT40Q6A162 MIR3179-4-201ENST00000617599 84 ntBASIC-0.36□□□□□ -2.47
KRT40Q6A162 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.37□□□□□ -2.47
KRT40Q6A162 MIR196A2-201ENST00000385189 110 ntBASIC-0.37□□□□□ -2.47
KRT40Q6A162 MIR204-201ENST00000385200 110 ntBASIC-0.37□□□□□ -2.47
KRT40Q6A162 MT-TQ-201ENST00000387372 72 ntBASIC-0.37□□□□□ -2.47
KRT40Q6A162 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.37□□□□□ -2.47
KRT40Q6A162 SNORA40.16-201ENST00000517238 121 ntBASIC-0.37□□□□□ -2.47
KRT40Q6A162 U4.2-201ENST00000618561 85 ntBASIC-0.37□□□□□ -2.47
KRT40Q6A162 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.38□□□□□ -2.47
KRT40Q6A162 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.38□□□□□ -2.47
KRT40Q6A162 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.38□□□□□ -2.47
KRT40Q6A162 SNORD19-201ENST00000391191 68 ntBASIC-0.38□□□□□ -2.47
KRT40Q6A162 SNORD116.2-201ENST00000391251 93 ntBASIC-0.38□□□□□ -2.47
KRT40Q6A162 MIR1207-201ENST00000408249 87 ntBASIC-0.38□□□□□ -2.47
KRT40Q6A162 MIR579-201ENST00000385221 98 ntBASIC-0.39□□□□□ -2.47
KRT40Q6A162 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.39□□□□□ -2.47
KRT40Q6A162 AP000533.3-201ENST00000447704 118 ntBASIC-0.39□□□□□ -2.47
KRT40Q6A162 SNORA13-201ENST00000458790 133 ntBASIC-0.39□□□□□ -2.47
KRT40Q6A162 SNORD63.1-201ENST00000516178 80 ntBASIC-0.39□□□□□ -2.47
KRT40Q6A162 RNU7-151P-201ENST00000516930 53 ntBASIC-0.39□□□□□ -2.47
KRT40Q6A162 MIR548AZ-201ENST00000616567 95 ntBASIC-0.39□□□□□ -2.47
KRT40Q6A162 RNU6-810P-201ENST00000364001 107 ntBASIC-0.4□□□□□ -2.47
KRT40Q6A162 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.4□□□□□ -2.47
KRT40Q6A162 RNU6-520P-201ENST00000384717 104 ntBASIC-0.4□□□□□ -2.47
KRT40Q6A162 RNU7-119P-201ENST00000459279 63 ntBASIC-0.4□□□□□ -2.47
KRT40Q6A162 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.4□□□□□ -2.47
KRT40Q6A162 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.4□□□□□ -2.47
KRT40Q6A162 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms