Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 SNORA63-201ENST00000363450 132 ntBASIC-3.66□□□□□ -3
RPS28P62857 RNY3P1-201ENST00000365085 102 ntBASIC-3.66□□□□□ -3
RPS28P62857 MIR519C-201ENST00000385053 87 ntBASIC-3.66□□□□□ -3
RPS28P62857 MIR124-1-201ENST00000385275 85 ntBASIC-3.66□□□□□ -3
RPS28P62857 AL451105.1-201ENST00000450005 189 ntBASIC-3.66□□□□□ -3
RPS28P62857 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.66□□□□□ -3
RPS28P62857 RNU6-742P-201ENST00000365289 107 ntBASIC-3.67□□□□□ -3
RPS28P62857 RNU6-231P-201ENST00000517122 103 ntBASIC-3.67□□□□□ -3
RPS28P62857 SNORD58C-201ENST00000365223 64 ntBASIC-3.68□□□□□ -3
RPS28P62857 SNORD45A-201ENST00000384512 84 ntBASIC-3.68□□□□□ -3
RPS28P62857 RNU6-665P-201ENST00000384639 107 ntBASIC-3.68□□□□□ -3
RPS28P62857 RNU6-402P-201ENST00000410678 103 ntBASIC-3.68□□□□□ -3
RPS28P62857 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.69□□□□□ -3
RPS28P62857 SNORA40B-201ENST00000385573 128 ntBASIC-3.69□□□□□ -3
RPS28P62857 RNU6-822P-201ENST00000362707 106 ntBASIC-3.7□□□□□ -3
RPS28P62857 SNORD45.2-201ENST00000363552 72 ntBASIC-3.7□□□□□ -3
RPS28P62857 RNU6-574P-201ENST00000384265 107 ntBASIC-3.7□□□□□ -3
RPS28P62857 SNORD116.2-201ENST00000391251 93 ntBASIC-3.7□□□□□ -3
RPS28P62857 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.7□□□□□ -3
RPS28P62857 MIR3908-201ENST00000579798 126 ntBASIC-3.7□□□□□ -3
RPS28P62857 MIR548AH-201ENST00000637109 76 ntBASIC-3.7□□□□□ -3
RPS28P62857 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.71□□□□□ -3
RPS28P62857 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.71□□□□□ -3
RPS28P62857 MIR8053-201ENST00000613344 75 ntBASIC-3.71□□□□□ -3
RPS28P62857 AC139792.2-201ENST00000624218 587 ntBASIC-3.71□□□□□ -3
RPS28P62857 RNU6-918P-201ENST00000391219 106 ntBASIC-3.72□□□□□ -3
RPS28P62857 SCARNA23-201ENST00000516060 130 ntBASIC-3.72□□□□□ -3
RPS28P62857 MIR656-201ENST00000385224 78 ntBASIC-3.73□□□□□ -3.01
RPS28P62857 RNU6-557P-201ENST00000516842 110 ntBASIC-3.73□□□□□ -3.01
RPS28P62857 AP001318.4-201ENST00000616637 121 ntBASIC-3.73□□□□□ -3.01
RPS28P62857 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.74□□□□□ -3.01
RPS28P62857 AC139453.2-201ENST00000487255 133 ntBASIC-3.74□□□□□ -3.01
RPS28P62857 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.75□□□□□ -3.01
RPS28P62857 RNU6-623P-201ENST00000363143 105 ntBASIC-3.75□□□□□ -3.01
RPS28P62857 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.75□□□□□ -3.01
RPS28P62857 RNU7-61P-201ENST00000515897 61 ntBASIC-3.75□□□□□ -3.01
RPS28P62857 SNORA40.16-201ENST00000517238 121 ntBASIC-3.75□□□□□ -3.01
RPS28P62857 RNU6-92P-201ENST00000605893 104 ntBASIC-3.75□□□□□ -3.01
RPS28P62857 SNORD60.1-201ENST00000362451 73 ntBASIC-3.76□□□□□ -3.01
RPS28P62857 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.76□□□□□ -3.01
RPS28P62857 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.76□□□□□ -3.01
RPS28P62857 MIR4484-201ENST00000582855 83 ntBASIC-3.76□□□□□ -3.01
RPS28P62857 SNORA63.4-201ENST00000362763 126 ntBASIC-3.77□□□□□ -3.01
RPS28P62857 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.77□□□□□ -3.01
RPS28P62857 SNORD42.2-201ENST00000365570 69 ntBASIC-3.77□□□□□ -3.01
RPS28P62857 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.77□□□□□ -3.01
RPS28P62857 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.77□□□□□ -3.01
RPS28P62857 AC062037.1-201ENST00000605302 128 ntBASIC-3.77□□□□□ -3.01
RPS28P62857 Y_RNA.240-201ENST00000364469 95 ntBASIC-3.78□□□□□ -3.01
RPS28P62857 RNU6-686P-201ENST00000364839 107 ntBASIC-3.78□□□□□ -3.01
RPS28P62857 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.78□□□□□ -3.01
RPS28P62857 MTND2P23-201ENST00000422990 651 ntBASIC-3.78□□□□□ -3.01
RPS28P62857 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.79□□□□□ -3.02
RPS28P62857 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.79□□□□□ -3.02
RPS28P62857 RNA5SP224-201ENST00000365069 126 ntBASIC-3.79□□□□□ -3.02
RPS28P62857 SNORD116-24-201ENST00000384549 92 ntBASIC-3.79□□□□□ -3.02
RPS28P62857 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.79□□□□□ -3.02
RPS28P62857 RNU6-904P-201ENST00000516206 101 ntBASIC-3.79□□□□□ -3.02
RPS28P62857 RNU6-162P-201ENST00000516228 103 ntBASIC-3.79□□□□□ -3.02
RPS28P62857 MIR548AI-201ENST00000579940 88 ntBASIC-3.79□□□□□ -3.02
RPS28P62857 MIR4680-201ENST00000580906 66 ntBASIC-3.79□□□□□ -3.02
RPS28P62857 AP001340.1-201ENST00000624405 217 ntBASIC-3.79□□□□□ -3.02
RPS28P62857 SNORA81.3-201ENST00000517283 198 ntBASIC-3.8□□□□□ -3.02
RPS28P62857 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.81□□□□□ -3.02
RPS28P62857 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.82□□□□□ -3.02
RPS28P62857 MTATP8P2-201ENST00000435212 202 ntBASIC-3.82□□□□□ -3.02
RPS28P62857 MIR664A-201ENST00000626086 82 ntBASIC-3.82□□□□□ -3.02
RPS28P62857 RNU6-633P-201ENST00000362612 103 ntBASIC-3.83□□□□□ -3.02
RPS28P62857 SNORD45C-201ENST00000383893 79 ntBASIC-3.83□□□□□ -3.02
RPS28P62857 RNU6-196P-201ENST00000384315 107 ntBASIC-3.83□□□□□ -3.02
RPS28P62857 AC093729.1-201ENST00000513074 128 ntBASIC-3.83□□□□□ -3.02
RPS28P62857 U7.3-201ENST00000616123 62 ntBASIC-3.83□□□□□ -3.02
RPS28P62857 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.84□□□□□ -3.02
RPS28P62857 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.85□□□□□ -3.03
RPS28P62857 RNU6-659P-201ENST00000516454 104 ntBASIC-3.85□□□□□ -3.03
RPS28P62857 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.86□□□□□ -3.03
RPS28P62857 U7.2-201ENST00000607576 63 ntBASIC-3.86□□□□□ -3.03
RPS28P62857 MIR8062-201ENST00000621515 85 ntBASIC-3.86□□□□□ -3.03
RPS28P62857 MIR1297-201ENST00000637311 77 ntBASIC-3.86□□□□□ -3.03
RPS28P62857 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.87□□□□□ -3.03
RPS28P62857 AL589823.1-201ENST00000429577 183 ntBASIC-3.87□□□□□ -3.03
RPS28P62857 Y_RNA.202-201ENST00000364083 110 ntBASIC-3.88□□□□□ -3.03
RPS28P62857 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.88□□□□□ -3.03
RPS28P62857 RNU6-542P-201ENST00000516405 103 ntBASIC-3.88□□□□□ -3.03
RPS28P62857 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.89□□□□□ -3.03
RPS28P62857 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.89□□□□□ -3.03
RPS28P62857 AC141273.2-201ENST00000618989 130 ntBASIC-3.89□□□□□ -3.03
RPS28P62857 RNU6-788P-201ENST00000390967 104 ntBASIC-3.9□□□□□ -3.03
RPS28P62857 RNU6-772P-201ENST00000516042 105 ntBASIC-3.9□□□□□ -3.03
RPS28P62857 Y_RNA.431-201ENST00000384086 102 ntBASIC-3.92□□□□□ -3.04
RPS28P62857 RNU6-419P-201ENST00000517030 63 ntBASIC-3.92□□□□□ -3.04
RPS28P62857 AL157777.2-201ENST00000258070 137 ntBASIC-3.93□□□□□ -3.04
RPS28P62857 RNU6-474P-201ENST00000384243 107 ntBASIC-3.93□□□□□ -3.04
RPS28P62857 AC022559.1-201ENST00000520905 205 ntBASIC-3.93□□□□□ -3.04
RPS28P62857 MIR4668-201ENST00000582284 70 ntBASIC-3.93□□□□□ -3.04
RPS28P62857 MIR4795-201ENST00000584182 89 ntBASIC-3.93□□□□□ -3.04
RPS28P62857 SNORA33.2-201ENST00000365413 134 ntBASIC-3.94□□□□□ -3.04
RPS28P62857 RNU6-836P-201ENST00000362920 107 ntBASIC-3.95□□□□□ -3.04
RPS28P62857 RNU6-635P-201ENST00000516651 102 ntBASIC-3.95□□□□□ -3.04
RPS28P62857 MIR590-201ENST00000385008 97 ntBASIC-3.96□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms