Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.71□□□□□ -2.52
LIG4P49917 RNU6-294P-201ENST00000364999 102 ntBASIC-0.71□□□□□ -2.52
LIG4P49917 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.71□□□□□ -2.52
LIG4P49917 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.71□□□□□ -2.52
LIG4P49917 RPL35AP4-201ENST00000412007 102 ntBASIC-0.71□□□□□ -2.52
LIG4P49917 AC090616.4-201ENST00000448026 115 ntBASIC-0.71□□□□□ -2.52
LIG4P49917 RNU6-523P-201ENST00000516304 54 ntBASIC-0.71□□□□□ -2.52
LIG4P49917 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.71□□□□□ -2.52
LIG4P49917 snoU83B.1-201ENST00000517136 88 ntBASIC-0.71□□□□□ -2.52
LIG4P49917 MIR548AI-201ENST00000579940 88 ntBASIC-0.71□□□□□ -2.52
LIG4P49917 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.72□□□□□ -2.52
LIG4P49917 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.72□□□□□ -2.52
LIG4P49917 SNORD116-16-201ENST00000384533 92 ntBASIC-0.72□□□□□ -2.52
LIG4P49917 RNU6-258P-201ENST00000390884 101 ntBASIC-0.72□□□□□ -2.52
LIG4P49917 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.72□□□□□ -2.52
LIG4P49917 SNORD1B-201ENST00000363091 84 ntBASIC-0.73□□□□□ -2.53
LIG4P49917 RNA5SP215-201ENST00000363440 122 ntBASIC-0.73□□□□□ -2.53
LIG4P49917 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.73□□□□□ -2.53
LIG4P49917 MIR527-201ENST00000385244 85 ntBASIC-0.73□□□□□ -2.53
LIG4P49917 RNA5SP67-201ENST00000516422 131 ntBASIC-0.73□□□□□ -2.53
LIG4P49917 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.73□□□□□ -2.53
LIG4P49917 MIR8053-201ENST00000613344 75 ntBASIC-0.73□□□□□ -2.53
LIG4P49917 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.74□□□□□ -2.53
LIG4P49917 MIR450A2-201ENST00000385022 100 ntBASIC-0.74□□□□□ -2.53
LIG4P49917 MIR507-201ENST00000385234 94 ntBASIC-0.74□□□□□ -2.53
LIG4P49917 RNU6-630P-201ENST00000391258 106 ntBASIC-0.74□□□□□ -2.53
LIG4P49917 MIR889-201ENST00000401280 79 ntBASIC-0.74□□□□□ -2.53
LIG4P49917 RNU6-70P-201ENST00000516438 60 ntBASIC-0.74□□□□□ -2.53
LIG4P49917 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.74□□□□□ -2.53
LIG4P49917 AC091912.2-201ENST00000624798 167 ntBASIC-0.74□□□□□ -2.53
LIG4P49917 MIR6874-201ENST00000635894 71 ntBASIC-0.74□□□□□ -2.53
LIG4P49917 RNU6-668P-201ENST00000364180 107 ntBASIC-0.75□□□□□ -2.53
LIG4P49917 RNU6-164P-201ENST00000364604 103 ntBASIC-0.75□□□□□ -2.53
LIG4P49917 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.75□□□□□ -2.53
LIG4P49917 MTND4LP1-201ENST00000446263 157 ntBASIC-0.75□□□□□ -2.53
LIG4P49917 MIR4306-201ENST00000583390 91 ntBASIC-0.75□□□□□ -2.53
LIG4P49917 MIR6502-201ENST00000617296 76 ntBASIC-0.75□□□□□ -2.53
LIG4P49917 MT-TQ-201ENST00000387372 72 ntBASIC-0.76□□□□□ -2.53
LIG4P49917 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.76□□□□□ -2.53
LIG4P49917 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.77□□□□□ -2.53
LIG4P49917 MIR3170-201ENST00000582699 77 ntBASIC-0.77□□□□□ -2.53
LIG4P49917 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.77□□□□□ -2.53
LIG4P49917 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.78□□□□□ -2.53
LIG4P49917 RNU6-540P-201ENST00000384622 101 ntBASIC-0.78□□□□□ -2.53
LIG4P49917 MIR7978-201ENST00000636158 59 ntBASIC-0.78□□□□□ -2.53
LIG4P49917 RNU6-79P-201ENST00000362511 107 ntBASIC-0.79□□□□□ -2.54
LIG4P49917 SNORD73B-201ENST00000364394 72 ntBASIC-0.79□□□□□ -2.54
LIG4P49917 RNU6-820P-201ENST00000384273 107 ntBASIC-0.79□□□□□ -2.54
LIG4P49917 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
LIG4P49917 MIR548Q-201ENST00000408404 100 ntBASIC-0.79□□□□□ -2.54
LIG4P49917 MIR548AX-201ENST00000580117 73 ntBASIC-0.79□□□□□ -2.54
LIG4P49917 MIR4324-201ENST00000584846 72 ntBASIC-0.79□□□□□ -2.54
LIG4P49917 RNU6-228P-201ENST00000362700 106 ntBASIC-0.8□□□□□ -2.54
LIG4P49917 RNU6-573P-201ENST00000383938 106 ntBASIC-0.8□□□□□ -2.54
LIG4P49917 RNU6-974P-201ENST00000384099 108 ntBASIC-0.8□□□□□ -2.54
LIG4P49917 MIR4490-201ENST00000582647 84 ntBASIC-0.8□□□□□ -2.54
LIG4P49917 RNU6-242P-201ENST00000384359 107 ntBASIC-0.81□□□□□ -2.54
LIG4P49917 RNU6-24P-201ENST00000384440 107 ntBASIC-0.81□□□□□ -2.54
LIG4P49917 MIR125B1-201ENST00000385236 88 ntBASIC-0.81□□□□□ -2.54
LIG4P49917 MIR154-201ENST00000385243 84 ntBASIC-0.81□□□□□ -2.54
LIG4P49917 RNU6-380P-201ENST00000410207 107 ntBASIC-0.81□□□□□ -2.54
LIG4P49917 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.81□□□□□ -2.54
LIG4P49917 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.81□□□□□ -2.54
LIG4P49917 RNU7-151P-201ENST00000516930 53 ntBASIC-0.81□□□□□ -2.54
LIG4P49917 MIR548AA1-201ENST00000384971 97 ntBASIC-0.82□□□□□ -2.54
LIG4P49917 SNORD60.1-201ENST00000362451 73 ntBASIC-0.83□□□□□ -2.54
LIG4P49917 RNU6-563P-201ENST00000364872 108 ntBASIC-0.83□□□□□ -2.54
LIG4P49917 RNU6-576P-201ENST00000390854 102 ntBASIC-0.83□□□□□ -2.54
LIG4P49917 RNY4P29-201ENST00000410801 97 ntBASIC-0.83□□□□□ -2.54
LIG4P49917 RNU6-634P-201ENST00000459134 106 ntBASIC-0.83□□□□□ -2.54
LIG4P49917 RNA5SP170-201ENST00000517150 101 ntBASIC-0.83□□□□□ -2.54
LIG4P49917 MIR3115-201ENST00000577915 68 ntBASIC-0.83□□□□□ -2.54
LIG4P49917 AC005520.4-201ENST00000604337 90 ntBASIC-0.83□□□□□ -2.54
LIG4P49917 RNA5SP173-201ENST00000364857 136 ntBASIC-0.84□□□□□ -2.54
LIG4P49917 RNU6-411P-201ENST00000384451 107 ntBASIC-0.84□□□□□ -2.54
LIG4P49917 MIR579-201ENST00000385221 98 ntBASIC-0.84□□□□□ -2.54
LIG4P49917 RNU6-172P-201ENST00000411000 93 ntBASIC-0.84□□□□□ -2.54
LIG4P49917 RNU6-669P-201ENST00000365575 107 ntBASIC-0.85□□□□□ -2.55
LIG4P49917 MIR1255A-201ENST00000408338 113 ntBASIC-0.85□□□□□ -2.55
LIG4P49917 RNU6-542P-201ENST00000516405 103 ntBASIC-0.85□□□□□ -2.55
LIG4P49917 RNU6-92P-201ENST00000605893 104 ntBASIC-0.85□□□□□ -2.55
LIG4P49917 MIR429-201ENST00000362106 83 ntBASIC-0.86□□□□□ -2.55
LIG4P49917 RNU6-895P-201ENST00000384125 103 ntBASIC-0.86□□□□□ -2.55
LIG4P49917 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.86□□□□□ -2.55
LIG4P49917 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.86□□□□□ -2.55
LIG4P49917 RNU6-279P-201ENST00000391297 101 ntBASIC-0.86□□□□□ -2.55
LIG4P49917 RNU6-857P-201ENST00000515893 110 ntBASIC-0.86□□□□□ -2.55
LIG4P49917 U7.4-201ENST00000614961 63 ntBASIC-0.86□□□□□ -2.55
LIG4P49917 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.87□□□□□ -2.55
LIG4P49917 AC138207.3-201ENST00000585289 166 ntBASIC-0.87□□□□□ -2.55
LIG4P49917 AC013734.1-201ENST00000619329 111 ntBASIC-0.87□□□□□ -2.55
LIG4P49917 MIR6738-201ENST00000619620 64 ntBASIC-0.87□□□□□ -2.55
LIG4P49917 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.88□□□□□ -2.55
LIG4P49917 RNA5SP225-201ENST00000410874 135 ntBASIC-0.88□□□□□ -2.55
LIG4P49917 AC120024.2-201ENST00000576526 175 ntBASIC-0.88□□□□□ -2.55
LIG4P49917 MIR4520-1-201ENST00000582609 70 ntBASIC-0.88□□□□□ -2.55
LIG4P49917 RNA5SP86-201ENST00000390869 98 ntBASIC-0.89□□□□□ -2.55
LIG4P49917 RNU6-663P-201ENST00000391105 106 ntBASIC-0.89□□□□□ -2.55
LIG4P49917 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.89□□□□□ -2.55
LIG4P49917 MIR409-201ENST00000362237 79 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 336.1 ms