Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 RNU6-554P-201ENST00000410466 106 ntBASIC-2.22□□□□□ -2.76
RPL28P46779 snoU13.10-201ENST00000459301 103 ntBASIC-2.22□□□□□ -2.76
RPL28P46779 SNORD63.2-201ENST00000516303 64 ntBASIC-2.22□□□□□ -2.76
RPL28P46779 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.22□□□□□ -2.76
RPL28P46779 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.23□□□□□ -2.77
RPL28P46779 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.23□□□□□ -2.77
RPL28P46779 SNORA19-201ENST00000384737 128 ntBASIC-2.23□□□□□ -2.77
RPL28P46779 MIR7978-201ENST00000636158 59 ntBASIC-2.23□□□□□ -2.77
RPL28P46779 RNU6-668P-201ENST00000364180 107 ntBASIC-2.24□□□□□ -2.77
RPL28P46779 RNU6-497P-201ENST00000365316 104 ntBASIC-2.24□□□□□ -2.77
RPL28P46779 RNU6-106P-201ENST00000384405 107 ntBASIC-2.24□□□□□ -2.77
RPL28P46779 RNY4P18-201ENST00000391107 89 ntBASIC-2.24□□□□□ -2.77
RPL28P46779 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.24□□□□□ -2.77
RPL28P46779 RNU6-194P-201ENST00000363862 105 ntBASIC-2.25□□□□□ -2.77
RPL28P46779 RNY3P8-201ENST00000411366 126 ntBASIC-2.25□□□□□ -2.77
RPL28P46779 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.25□□□□□ -2.77
RPL28P46779 SNORD113.1-201ENST00000363280 73 ntBASIC-2.26□□□□□ -2.77
RPL28P46779 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.26□□□□□ -2.77
RPL28P46779 MIR579-201ENST00000385221 98 ntBASIC-2.26□□□□□ -2.77
RPL28P46779 MIR125B1-201ENST00000385236 88 ntBASIC-2.26□□□□□ -2.77
RPL28P46779 RNU6-523P-201ENST00000516304 54 ntBASIC-2.26□□□□□ -2.77
RPL28P46779 RNA5SP173-201ENST00000364857 136 ntBASIC-2.27□□□□□ -2.77
RPL28P46779 AL117351.2-201ENST00000513571 157 ntBASIC-2.27□□□□□ -2.77
RPL28P46779 RNU6-346P-201ENST00000516288 111 ntBASIC-2.27□□□□□ -2.77
RPL28P46779 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.28□□□□□ -2.77
RPL28P46779 RNU6-219P-201ENST00000364728 107 ntBASIC-2.28□□□□□ -2.77
RPL28P46779 RNU6-118P-201ENST00000516552 102 ntBASIC-2.28□□□□□ -2.77
RPL28P46779 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.28□□□□□ -2.77
RPL28P46779 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.29□□□□□ -2.78
RPL28P46779 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.29□□□□□ -2.78
RPL28P46779 MIR496-201ENST00000385226 102 ntBASIC-2.29□□□□□ -2.78
RPL28P46779 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.29□□□□□ -2.78
RPL28P46779 RNU6-172P-201ENST00000411000 93 ntBASIC-2.29□□□□□ -2.78
RPL28P46779 MIR4484-201ENST00000582855 83 ntBASIC-2.29□□□□□ -2.78
RPL28P46779 MIR8053-201ENST00000613344 75 ntBASIC-2.29□□□□□ -2.78
RPL28P46779 SNORD18C-201ENST00000362704 69 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 SNORD116-14-201ENST00000383894 92 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 SNORD116-17-201ENST00000383929 92 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 RNU6-974P-201ENST00000384099 108 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 SNORD116-15-201ENST00000384445 92 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 SNORD116-19-201ENST00000384729 92 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 RNU6-402P-201ENST00000410678 103 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 MIR4748-201ENST00000578076 82 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 MIR466-201ENST00000580653 84 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 MIR548BB-201ENST00000626714 66 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 MIR1297-201ENST00000637311 77 ntBASIC-2.3□□□□□ -2.78
RPL28P46779 RNY1P5-201ENST00000383890 115 ntBASIC-2.31□□□□□ -2.78
RPL28P46779 RNU6-463P-201ENST00000384340 107 ntBASIC-2.31□□□□□ -2.78
RPL28P46779 RNU6-129P-201ENST00000391022 107 ntBASIC-2.31□□□□□ -2.78
RPL28P46779 AP001094.1-201ENST00000579805 193 ntBASIC-2.31□□□□□ -2.78
RPL28P46779 SNORD116-22-201ENST00000384430 92 ntBASIC-2.32□□□□□ -2.78
RPL28P46779 SNORD45A-201ENST00000384512 84 ntBASIC-2.32□□□□□ -2.78
RPL28P46779 RNU6-907P-201ENST00000390924 102 ntBASIC-2.32□□□□□ -2.78
RPL28P46779 RNU6-267P-201ENST00000516714 103 ntBASIC-2.32□□□□□ -2.78
RPL28P46779 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.32□□□□□ -2.78
RPL28P46779 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.33□□□□□ -2.78
RPL28P46779 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.33□□□□□ -2.78
RPL28P46779 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.33□□□□□ -2.78
RPL28P46779 MIR581-201ENST00000384895 96 ntBASIC-2.33□□□□□ -2.78
RPL28P46779 MT-TG-201ENST00000387429 68 ntBASIC-2.33□□□□□ -2.78
RPL28P46779 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.34□□□□□ -2.78
RPL28P46779 MIR3139-201ENST00000579145 76 ntBASIC-2.34□□□□□ -2.78
RPL28P46779 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.35□□□□□ -2.79
RPL28P46779 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.35□□□□□ -2.79
RPL28P46779 RNU6-255P-201ENST00000516957 105 ntBASIC-2.35□□□□□ -2.79
RPL28P46779 FTX_4.1-201ENST00000616291 147 ntBASIC-2.35□□□□□ -2.79
RPL28P46779 SNORA63.4-201ENST00000362763 126 ntBASIC-2.36□□□□□ -2.79
RPL28P46779 RNU6-755P-201ENST00000364400 103 ntBASIC-2.36□□□□□ -2.79
RPL28P46779 AC097484.2-201ENST00000509147 251 ntBASIC-2.36□□□□□ -2.79
RPL28P46779 MIR2052-201ENST00000636055 55 ntBASIC-2.36□□□□□ -2.79
RPL28P46779 MIR664A-201ENST00000626086 82 ntBASIC-2.37□□□□□ -2.79
RPL28P46779 RNY1P1-201ENST00000364372 112 ntBASIC-2.38□□□□□ -2.79
RPL28P46779 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.38□□□□□ -2.79
RPL28P46779 RNU6-520P-201ENST00000384717 104 ntBASIC-2.39□□□□□ -2.79
RPL28P46779 MIR548N-201ENST00000408742 75 ntBASIC-2.39□□□□□ -2.79
RPL28P46779 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.39□□□□□ -2.79
RPL28P46779 AP001318.4-201ENST00000616637 121 ntBASIC-2.39□□□□□ -2.79
RPL28P46779 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.4□□□□□ -2.79
RPL28P46779 RNU7-160P-201ENST00000516660 62 ntBASIC-2.4□□□□□ -2.79
RPL28P46779 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.41□□□□□ -2.8
RPL28P46779 SNORD60-201ENST00000383903 83 ntBASIC-2.41□□□□□ -2.8
RPL28P46779 SNORD116-24-201ENST00000384549 92 ntBASIC-2.41□□□□□ -2.8
RPL28P46779 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.41□□□□□ -2.8
RPL28P46779 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.41□□□□□ -2.8
RPL28P46779 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.41□□□□□ -2.8
RPL28P46779 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.41□□□□□ -2.8
RPL28P46779 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.41□□□□□ -2.8
RPL28P46779 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.41□□□□□ -2.8
RPL28P46779 MIR202-201ENST00000362219 110 ntBASIC-2.42□□□□□ -2.8
RPL28P46779 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.42□□□□□ -2.8
RPL28P46779 RNU6-380P-201ENST00000410207 107 ntBASIC-2.42□□□□□ -2.8
RPL28P46779 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.42□□□□□ -2.8
RPL28P46779 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.42□□□□□ -2.8
RPL28P46779 RNU6-649P-201ENST00000384463 107 ntBASIC-2.43□□□□□ -2.8
RPL28P46779 MALAT1.1-201ENST00000618249 95 ntBASIC-2.43□□□□□ -2.8
RPL28P46779 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.43□□□□□ -2.8
RPL28P46779 AC006160.2-201ENST00000637708 154 ntBASIC-2.43□□□□□ -2.8
RPL28P46779 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.44□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms