Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 MIR429-201ENST00000362106 83 ntBASIC-0.94□□□□□ -2.56
APOBEC1P41238 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.94□□□□□ -2.56
APOBEC1P41238 MIR527-201ENST00000385244 85 ntBASIC-0.94□□□□□ -2.56
APOBEC1P41238 SNORD113-2-201ENST00000391082 72 ntBASIC-0.95□□□□□ -2.56
APOBEC1P41238 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.95□□□□□ -2.56
APOBEC1P41238 SNORD115-33-201ENST00000363723 82 ntBASIC-0.96□□□□□ -2.56
APOBEC1P41238 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.96□□□□□ -2.56
APOBEC1P41238 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.96□□□□□ -2.56
APOBEC1P41238 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.96□□□□□ -2.56
APOBEC1P41238 RNU6-246P-201ENST00000384702 107 ntBASIC-0.96□□□□□ -2.56
APOBEC1P41238 MIR587-201ENST00000384845 96 ntBASIC-0.96□□□□□ -2.56
APOBEC1P41238 SNORA26.4-201ENST00000391188 123 ntBASIC-0.96□□□□□ -2.56
APOBEC1P41238 RNU6-687P-201ENST00000516443 89 ntBASIC-0.96□□□□□ -2.56
APOBEC1P41238 uc_338.19-201ENST00000616808 99 ntBASIC-0.96□□□□□ -2.56
APOBEC1P41238 U4.4-201ENST00000620626 117 ntBASIC-0.96□□□□□ -2.56
APOBEC1P41238 MIR630-201ENST00000384957 97 ntBASIC-0.97□□□□□ -2.56
APOBEC1P41238 SCARNA17-201ENST00000516183 144 ntBASIC-0.97□□□□□ -2.56
APOBEC1P41238 U7.5-201ENST00000517224 61 ntBASIC-0.97□□□□□ -2.56
APOBEC1P41238 RNU6-458P-201ENST00000384179 107 ntBASIC-0.98□□□□□ -2.57
APOBEC1P41238 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.98□□□□□ -2.57
APOBEC1P41238 U6.58-201ENST00000613107 107 ntBASIC-0.98□□□□□ -2.57
APOBEC1P41238 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.99□□□□□ -2.57
APOBEC1P41238 RNA5SP331-201ENST00000364986 107 ntBASIC-0.99□□□□□ -2.57
APOBEC1P41238 MIR1255A-201ENST00000408338 113 ntBASIC-0.99□□□□□ -2.57
APOBEC1P41238 RNU7-88P-201ENST00000458752 63 ntBASIC-0.99□□□□□ -2.57
APOBEC1P41238 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.99□□□□□ -2.57
APOBEC1P41238 MIR6738-201ENST00000619620 64 ntBASIC-0.99□□□□□ -2.57
APOBEC1P41238 RNU6-228P-201ENST00000362700 106 ntBASIC-1□□□□□ -2.57
APOBEC1P41238 SNORD115-31-201ENST00000365318 82 ntBASIC-1□□□□□ -2.57
APOBEC1P41238 Y_RNA.583-201ENST00000391033 113 ntBASIC-1□□□□□ -2.57
APOBEC1P41238 RNU6-732P-201ENST00000516033 103 ntBASIC-1□□□□□ -2.57
APOBEC1P41238 RNU6-24P-201ENST00000384440 107 ntBASIC-1.01□□□□□ -2.57
APOBEC1P41238 SNORD116-24-201ENST00000384549 92 ntBASIC-1.01□□□□□ -2.57
APOBEC1P41238 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.02□□□□□ -2.57
APOBEC1P41238 RNU6-10P-201ENST00000384036 107 ntBASIC-1.02□□□□□ -2.57
APOBEC1P41238 SNORD78.1-201ENST00000390866 65 ntBASIC-1.02□□□□□ -2.57
APOBEC1P41238 RNU6-279P-201ENST00000391297 101 ntBASIC-1.02□□□□□ -2.57
APOBEC1P41238 RNU6-857P-201ENST00000515893 110 ntBASIC-1.02□□□□□ -2.57
APOBEC1P41238 SNORD63.1-201ENST00000516178 80 ntBASIC-1.02□□□□□ -2.57
APOBEC1P41238 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.02□□□□□ -2.57
APOBEC1P41238 AL353691.2-201ENST00000443795 59 ntBASIC-1.03□□□□□ -2.57
APOBEC1P41238 RNU7-134P-201ENST00000458997 64 ntBASIC-1.04□□□□□ -2.58
APOBEC1P41238 snoU83B.1-201ENST00000517136 88 ntBASIC-1.04□□□□□ -2.58
APOBEC1P41238 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.04□□□□□ -2.58
APOBEC1P41238 MIR4324-201ENST00000584846 72 ntBASIC-1.04□□□□□ -2.58
APOBEC1P41238 MIR4320-201ENST00000636981 65 ntBASIC-1.04□□□□□ -2.58
APOBEC1P41238 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.05□□□□□ -2.58
APOBEC1P41238 MIR4679-1-201ENST00000637619 75 ntBASIC-1.05□□□□□ -2.58
APOBEC1P41238 RNU6-696P-201ENST00000390834 107 ntBASIC-1.06□□□□□ -2.58
APOBEC1P41238 RNU6-634P-201ENST00000459134 106 ntBASIC-1.06□□□□□ -2.58
APOBEC1P41238 MIR378F-201ENST00000578143 78 ntBASIC-1.06□□□□□ -2.58
APOBEC1P41238 RNU6-542P-201ENST00000516405 103 ntBASIC-1.07□□□□□ -2.58
APOBEC1P41238 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.08□□□□□ -2.58
APOBEC1P41238 SNX3P1X-201ENST00000414887 175 ntBASIC-1.08□□□□□ -2.58
APOBEC1P41238 SNORD116-16-201ENST00000384533 92 ntBASIC-1.09□□□□□ -2.58
APOBEC1P41238 RNU6-871P-201ENST00000516122 100 ntBASIC-1.09□□□□□ -2.58
APOBEC1P41238 AP002795.1-201ENST00000534879 84 ntBASIC-1.09□□□□□ -2.58
APOBEC1P41238 RNA5SP26-201ENST00000362406 119 ntBASIC-1.1□□□□□ -2.59
APOBEC1P41238 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.1□□□□□ -2.59
APOBEC1P41238 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.1□□□□□ -2.59
APOBEC1P41238 MIR6818-201ENST00000621576 65 ntBASIC-1.1□□□□□ -2.59
APOBEC1P41238 MIR29B1-201ENST00000385015 81 ntBASIC-1.11□□□□□ -2.59
APOBEC1P41238 RNU6-663P-201ENST00000391105 106 ntBASIC-1.11□□□□□ -2.59
APOBEC1P41238 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.11□□□□□ -2.59
APOBEC1P41238 RNU6-540P-201ENST00000384622 101 ntBASIC-1.12□□□□□ -2.59
APOBEC1P41238 SNORD19-201ENST00000391191 68 ntBASIC-1.12□□□□□ -2.59
APOBEC1P41238 MIR548Q-201ENST00000408404 100 ntBASIC-1.12□□□□□ -2.59
APOBEC1P41238 MIR4490-201ENST00000582647 84 ntBASIC-1.12□□□□□ -2.59
APOBEC1P41238 MIR5683-201ENST00000636514 76 ntBASIC-1.12□□□□□ -2.59
APOBEC1P41238 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.14□□□□□ -2.59
APOBEC1P41238 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.14□□□□□ -2.59
APOBEC1P41238 SNORA41B-201ENST00000384785 128 ntBASIC-1.14□□□□□ -2.59
APOBEC1P41238 RNA5SP225-201ENST00000410874 135 ntBASIC-1.14□□□□□ -2.59
APOBEC1P41238 MIR4306-201ENST00000583390 91 ntBASIC-1.14□□□□□ -2.59
APOBEC1P41238 RNU6-598P-201ENST00000364017 105 ntBASIC-1.15□□□□□ -2.59
APOBEC1P41238 MIR1468-201ENST00000410600 86 ntBASIC-1.15□□□□□ -2.59
APOBEC1P41238 RNU6-630P-201ENST00000391258 106 ntBASIC-1.16□□□□□ -2.6
APOBEC1P41238 SNORD30.1-201ENST00000391309 70 ntBASIC-1.16□□□□□ -2.6
APOBEC1P41238 RNU6-523P-201ENST00000516304 54 ntBASIC-1.16□□□□□ -2.6
APOBEC1P41238 MIR507-201ENST00000385234 94 ntBASIC-1.17□□□□□ -2.6
APOBEC1P41238 MIR8485-201ENST00000401372 91 ntBASIC-1.17□□□□□ -2.6
APOBEC1P41238 RNU6-92P-201ENST00000605893 104 ntBASIC-1.17□□□□□ -2.6
APOBEC1P41238 MIR889-201ENST00000401280 79 ntBASIC-1.18□□□□□ -2.6
APOBEC1P41238 MIR4662A-201ENST00000637499 67 ntBASIC-1.18□□□□□ -2.6
APOBEC1P41238 RNA5SP192-201ENST00000364404 120 ntBASIC-1.19□□□□□ -2.6
APOBEC1P41238 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.19□□□□□ -2.6
APOBEC1P41238 U2.18-201ENST00000622185 84 ntBASIC-1.19□□□□□ -2.6
APOBEC1P41238 MIR548AA1-201ENST00000384971 97 ntBASIC-1.2□□□□□ -2.6
APOBEC1P41238 MIR601-201ENST00000385256 79 ntBASIC-1.2□□□□□ -2.6
APOBEC1P41238 MIR198-201ENST00000637333 62 ntBASIC-1.2□□□□□ -2.6
APOBEC1P41238 SNORA25.4-201ENST00000363666 124 ntBASIC-1.21□□□□□ -2.6
APOBEC1P41238 RNU6-649P-201ENST00000384463 107 ntBASIC-1.21□□□□□ -2.6
APOBEC1P41238 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
APOBEC1P41238 MIR3115-201ENST00000577915 68 ntBASIC-1.22□□□□□ -2.6
APOBEC1P41238 AC091912.2-201ENST00000624798 167 ntBASIC-1.22□□□□□ -2.6
APOBEC1P41238 SNORD1B-201ENST00000363091 84 ntBASIC-1.23□□□□□ -2.61
APOBEC1P41238 RNU6-576P-201ENST00000390854 102 ntBASIC-1.24□□□□□ -2.61
APOBEC1P41238 RPL35AP4-201ENST00000412007 102 ntBASIC-1.24□□□□□ -2.61
APOBEC1P41238 RNU6-539P-201ENST00000516665 103 ntBASIC-1.24□□□□□ -2.61
APOBEC1P41238 RNU6-776P-201ENST00000364403 104 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms