Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL451105.1-201ENST00000450005 189 ntBASIC-4.01□□□□□ -3.05
CLIP1P30622 RNU6-1211P-201ENST00000459179 105 ntBASIC-4.01□□□□□ -3.05
CLIP1P30622 RNU6-557P-201ENST00000516842 110 ntBASIC-4.01□□□□□ -3.05
CLIP1P30622 RNU6-686P-201ENST00000364839 107 ntBASIC-4.02□□□□□ -3.05
CLIP1P30622 Y_RNA.579-201ENST00000390939 94 ntBASIC-4.02□□□□□ -3.05
CLIP1P30622 RNU6-904P-201ENST00000516206 101 ntBASIC-4.02□□□□□ -3.05
CLIP1P30622 U7.2-201ENST00000607576 63 ntBASIC-4.02□□□□□ -3.05
CLIP1P30622 RNU6-822P-201ENST00000362707 106 ntBASIC-4.03□□□□□ -3.05
CLIP1P30622 SNORA63.4-201ENST00000362763 126 ntBASIC-4.03□□□□□ -3.05
CLIP1P30622 RNU6-1227P-201ENST00000383981 107 ntBASIC-4.03□□□□□ -3.05
CLIP1P30622 SNORA40B-201ENST00000385573 128 ntBASIC-4.03□□□□□ -3.05
CLIP1P30622 SNORD115-45-201ENST00000391078 81 ntBASIC-4.03□□□□□ -3.05
CLIP1P30622 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.04□□□□□ -3.06
CLIP1P30622 SNORA81.3-201ENST00000517283 198 ntBASIC-4.04□□□□□ -3.06
CLIP1P30622 RNU6-92P-201ENST00000605893 104 ntBASIC-4.04□□□□□ -3.06
CLIP1P30622 U4.5-201ENST00000617137 123 ntBASIC-4.04□□□□□ -3.06
CLIP1P30622 AC093729.1-201ENST00000513074 128 ntBASIC-4.04□□□□□ -3.06
CLIP1P30622 U7.3-201ENST00000616123 62 ntBASIC-4.04□□□□□ -3.06
CLIP1P30622 Y_RNA.219-201ENST00000364232 113 ntBASIC-4.05□□□□□ -3.06
CLIP1P30622 RNU6-742P-201ENST00000365289 107 ntBASIC-4.05□□□□□ -3.06
CLIP1P30622 MIRLET7A1-201ENST00000362295 80 ntBASIC-4.06□□□□□ -3.06
CLIP1P30622 SNORA63-201ENST00000363450 132 ntBASIC-4.06□□□□□ -3.06
CLIP1P30622 MIR548F1-201ENST00000408667 84 ntBASIC-4.06□□□□□ -3.06
CLIP1P30622 AC022559.1-201ENST00000520905 205 ntBASIC-4.06□□□□□ -3.06
CLIP1P30622 RNU6-633P-201ENST00000362612 103 ntBASIC-4.07□□□□□ -3.06
CLIP1P30622 RNU6-1325P-201ENST00000364905 105 ntBASIC-4.07□□□□□ -3.06
CLIP1P30622 Y_RNA.586-201ENST00000391146 98 ntBASIC-4.07□□□□□ -3.06
CLIP1P30622 TMSB4XP3-201ENST00000445144 114 ntBASIC-4.07□□□□□ -3.06
CLIP1P30622 MTND3P3-201ENST00000505004 126 ntBASIC-4.07□□□□□ -3.06
CLIP1P30622 Y_RNA.680-201ENST00000516441 93 ntBASIC-4.07□□□□□ -3.06
CLIP1P30622 AC141273.2-201ENST00000618989 130 ntBASIC-4.07□□□□□ -3.06
CLIP1P30622 AC139792.2-201ENST00000624218 587 ntBASIC-4.07□□□□□ -3.06
CLIP1P30622 Y_RNA.158-201ENST00000363651 101 ntBASIC-4.08□□□□□ -3.06
CLIP1P30622 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.08□□□□□ -3.06
CLIP1P30622 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.08□□□□□ -3.06
CLIP1P30622 SNORD60.1-201ENST00000362451 73 ntBASIC-4.09□□□□□ -3.06
CLIP1P30622 RNU6-713P-201ENST00000384761 107 ntBASIC-4.09□□□□□ -3.06
CLIP1P30622 RNU6-659P-201ENST00000516454 104 ntBASIC-4.09□□□□□ -3.06
CLIP1P30622 MIR664A-201ENST00000626086 82 ntBASIC-4.09□□□□□ -3.06
CLIP1P30622 AL157777.2-201ENST00000258070 137 ntBASIC-4.1□□□□□ -3.07
CLIP1P30622 RNU6-854P-201ENST00000364036 107 ntBASIC-4.1□□□□□ -3.07
CLIP1P30622 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.1□□□□□ -3.07
CLIP1P30622 RNU6-772P-201ENST00000516042 105 ntBASIC-4.1□□□□□ -3.07
CLIP1P30622 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.11□□□□□ -3.07
CLIP1P30622 RNU6-1020P-201ENST00000363684 107 ntBASIC-4.11□□□□□ -3.07
CLIP1P30622 AC062037.1-201ENST00000605302 128 ntBASIC-4.11□□□□□ -3.07
CLIP1P30622 MIR1297-201ENST00000637311 77 ntBASIC-4.11□□□□□ -3.07
CLIP1P30622 Y_RNA.70-201ENST00000362886 110 ntBASIC-4.12□□□□□ -3.07
CLIP1P30622 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.12□□□□□ -3.07
CLIP1P30622 MTATP8P2-201ENST00000435212 202 ntBASIC-4.12□□□□□ -3.07
CLIP1P30622 SNORA40.16-201ENST00000517238 121 ntBASIC-4.12□□□□□ -3.07
CLIP1P30622 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.12□□□□□ -3.07
CLIP1P30622 SNORD116-24-201ENST00000384549 92 ntBASIC-4.12□□□□□ -3.07
CLIP1P30622 MT-TL1-201ENST00000386347 75 ntBASIC-4.12□□□□□ -3.07
CLIP1P30622 AC139453.2-201ENST00000487255 133 ntBASIC-4.12□□□□□ -3.07
CLIP1P30622 Y_RNA.717-201ENST00000517106 92 ntBASIC-4.12□□□□□ -3.07
CLIP1P30622 MIR548AI-201ENST00000579940 88 ntBASIC-4.12□□□□□ -3.07
CLIP1P30622 MIR3974-201ENST00000637126 96 ntBASIC-4.12□□□□□ -3.07
CLIP1P30622 RNU6-196P-201ENST00000384315 107 ntBASIC-4.13□□□□□ -3.07
CLIP1P30622 U6.104-201ENST00000637979 90 ntBASIC-4.14□□□□□ -3.07
CLIP1P30622 Y_RNA.459-201ENST00000384251 102 ntBASIC-4.15□□□□□ -3.07
CLIP1P30622 MIR656-201ENST00000385224 78 ntBASIC-4.15□□□□□ -3.07
CLIP1P30622 MIR124-1-201ENST00000385275 85 ntBASIC-4.15□□□□□ -3.07
CLIP1P30622 RNU6-1135P-201ENST00000411083 103 ntBASIC-4.15□□□□□ -3.07
CLIP1P30622 Y_RNA.272-201ENST00000364696 102 ntBASIC-4.16□□□□□ -3.08
CLIP1P30622 RNU6-542P-201ENST00000516405 103 ntBASIC-4.16□□□□□ -3.08
CLIP1P30622 Y_RNA.218-201ENST00000364218 104 ntBASIC-4.17□□□□□ -3.08
CLIP1P30622 SNORA33.2-201ENST00000365413 134 ntBASIC-4.17□□□□□ -3.08
CLIP1P30622 SNORD58.1-201ENST00000391313 66 ntBASIC-4.17□□□□□ -3.08
CLIP1P30622 RNY3P1-201ENST00000365085 102 ntBASIC-4.18□□□□□ -3.08
CLIP1P30622 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.18□□□□□ -3.08
CLIP1P30622 MIR4668-201ENST00000582284 70 ntBASIC-4.18□□□□□ -3.08
CLIP1P30622 Y_RNA.107-201ENST00000363190 121 ntBASIC-4.19□□□□□ -3.08
CLIP1P30622 Y_RNA.202-201ENST00000364083 110 ntBASIC-4.19□□□□□ -3.08
CLIP1P30622 MIR590-201ENST00000385008 97 ntBASIC-4.19□□□□□ -3.08
CLIP1P30622 MIR8062-201ENST00000621515 85 ntBASIC-4.19□□□□□ -3.08
CLIP1P30622 MIR4680-201ENST00000580906 66 ntBASIC-4.21□□□□□ -3.08
CLIP1P30622 MIR548X2-201ENST00000579776 100 ntBASIC-4.21□□□□□ -3.08
CLIP1P30622 SNORD42.2-201ENST00000365570 69 ntBASIC-4.23□□□□□ -3.09
CLIP1P30622 RNU6-895P-201ENST00000384125 103 ntBASIC-4.23□□□□□ -3.09
CLIP1P30622 RNU6-665P-201ENST00000384639 107 ntBASIC-4.23□□□□□ -3.09
CLIP1P30622 RNU6-1107P-201ENST00000364817 104 ntBASIC-4.24□□□□□ -3.09
CLIP1P30622 RNA5SP224-201ENST00000365069 126 ntBASIC-4.24□□□□□ -3.09
CLIP1P30622 MIR548AH-201ENST00000637109 76 ntBASIC-4.24□□□□□ -3.09
CLIP1P30622 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.25□□□□□ -3.09
CLIP1P30622 Y_RNA.290-201ENST00000364879 114 ntBASIC-4.25□□□□□ -3.09
CLIP1P30622 SNORD45C-201ENST00000383893 79 ntBASIC-4.25□□□□□ -3.09
CLIP1P30622 Y_RNA.620-201ENST00000411009 88 ntBASIC-4.25□□□□□ -3.09
CLIP1P30622 SNORD33.1-201ENST00000516213 88 ntBASIC-4.25□□□□□ -3.09
CLIP1P30622 RNU6-109P-201ENST00000516364 107 ntBASIC-4.25□□□□□ -3.09
CLIP1P30622 RNU6-184P-201ENST00000516514 107 ntBASIC-4.25□□□□□ -3.09
CLIP1P30622 Y_RNA.93-201ENST00000363066 109 ntBASIC-4.26□□□□□ -3.09
CLIP1P30622 Y_RNA.206-201ENST00000364136 102 ntBASIC-4.26□□□□□ -3.09
CLIP1P30622 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.26□□□□□ -3.09
CLIP1P30622 RNU4-71P-201ENST00000516258 113 ntBASIC-4.26□□□□□ -3.09
CLIP1P30622 RNU6-1015P-201ENST00000517121 99 ntBASIC-4.26□□□□□ -3.09
CLIP1P30622 Y_RNA.194-201ENST00000363985 102 ntBASIC-4.27□□□□□ -3.09
CLIP1P30622 Y_RNA.240-201ENST00000364469 95 ntBASIC-4.27□□□□□ -3.09
CLIP1P30622 RNU6-1137P-201ENST00000517073 99 ntBASIC-4.27□□□□□ -3.09
CLIP1P30622 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-4.28□□□□□ -3.09
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms