Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNU6-732P-201ENST00000516033 103 ntBASIC-0.69□□□□□ -2.52
HLA-DOBP13765 U6.111-201ENST00000636093 83 ntBASIC-0.69□□□□□ -2.52
HLA-DOBP13765 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.7□□□□□ -2.52
HLA-DOBP13765 SNORD115-33-201ENST00000363723 82 ntBASIC-0.7□□□□□ -2.52
HLA-DOBP13765 RNU7-88P-201ENST00000458752 63 ntBASIC-0.7□□□□□ -2.52
HLA-DOBP13765 RNU6-638P-201ENST00000516582 104 ntBASIC-0.7□□□□□ -2.52
HLA-DOBP13765 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.7□□□□□ -2.52
HLA-DOBP13765 AP001180.6-201ENST00000584918 159 ntBASIC-0.7□□□□□ -2.52
HLA-DOBP13765 RNU6-696P-201ENST00000390834 107 ntBASIC-0.71□□□□□ -2.52
HLA-DOBP13765 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.71□□□□□ -2.52
HLA-DOBP13765 RNU6-92P-201ENST00000605893 104 ntBASIC-0.71□□□□□ -2.52
HLA-DOBP13765 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.72□□□□□ -2.52
HLA-DOBP13765 SNORA41B-201ENST00000384785 128 ntBASIC-0.73□□□□□ -2.53
HLA-DOBP13765 AC005520.4-201ENST00000604337 90 ntBASIC-0.73□□□□□ -2.53
HLA-DOBP13765 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.74□□□□□ -2.53
HLA-DOBP13765 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.74□□□□□ -2.53
HLA-DOBP13765 MIR101-1-201ENST00000362265 75 ntBASIC-0.75□□□□□ -2.53
HLA-DOBP13765 AL353691.2-201ENST00000443795 59 ntBASIC-0.75□□□□□ -2.53
HLA-DOBP13765 MIR4493-201ENST00000584016 73 ntBASIC-0.75□□□□□ -2.53
HLA-DOBP13765 MIR147A-201ENST00000385079 72 ntBASIC-0.76□□□□□ -2.53
HLA-DOBP13765 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.76□□□□□ -2.53
HLA-DOBP13765 MIR5589-201ENST00000579442 60 ntBASIC-0.76□□□□□ -2.53
HLA-DOBP13765 AC103706.3-201ENST00000636297 85 ntBASIC-0.76□□□□□ -2.53
HLA-DOBP13765 RNU6-598P-201ENST00000364017 105 ntBASIC-0.77□□□□□ -2.53
HLA-DOBP13765 SNORD63.1-201ENST00000516178 80 ntBASIC-0.77□□□□□ -2.53
HLA-DOBP13765 MIR4511-201ENST00000582784 87 ntBASIC-0.77□□□□□ -2.53
HLA-DOBP13765 RNU6-800P-201ENST00000384473 103 ntBASIC-0.78□□□□□ -2.53
HLA-DOBP13765 SNORD57-201ENST00000448188 72 ntBASIC-0.78□□□□□ -2.53
HLA-DOBP13765 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.78□□□□□ -2.53
HLA-DOBP13765 MIR4636-201ENST00000582271 80 ntBASIC-0.78□□□□□ -2.53
HLA-DOBP13765 SNORD114-25-201ENST00000363742 72 ntBASIC-0.79□□□□□ -2.54
HLA-DOBP13765 RNA5SP451-201ENST00000410588 110 ntBASIC-0.79□□□□□ -2.54
HLA-DOBP13765 SNORA25.5-201ENST00000363782 126 ntBASIC-0.8□□□□□ -2.54
HLA-DOBP13765 AC114801.3-201ENST00000510231 177 ntBASIC-0.8□□□□□ -2.54
HLA-DOBP13765 SNORD60.1-201ENST00000362451 73 ntBASIC-0.81□□□□□ -2.54
HLA-DOBP13765 SNORD1B-201ENST00000363091 84 ntBASIC-0.81□□□□□ -2.54
HLA-DOBP13765 RNU6-431P-201ENST00000383874 107 ntBASIC-0.81□□□□□ -2.54
HLA-DOBP13765 SNORD64-201ENST00000386683 67 ntBASIC-0.82□□□□□ -2.54
HLA-DOBP13765 MIR196A1-201ENST00000388006 70 ntBASIC-0.82□□□□□ -2.54
HLA-DOBP13765 SNORD19-201ENST00000391191 68 ntBASIC-0.82□□□□□ -2.54
HLA-DOBP13765 AL500527.2-201ENST00000454105 95 ntBASIC-0.82□□□□□ -2.54
HLA-DOBP13765 MIR548AA1-201ENST00000384971 97 ntBASIC-0.83□□□□□ -2.54
HLA-DOBP13765 MIR548Q-201ENST00000408404 100 ntBASIC-0.83□□□□□ -2.54
HLA-DOBP13765 RNU6-122P-201ENST00000516818 107 ntBASIC-0.83□□□□□ -2.54
HLA-DOBP13765 U2.18-201ENST00000622185 84 ntBASIC-0.83□□□□□ -2.54
HLA-DOBP13765 MIR5683-201ENST00000636514 76 ntBASIC-0.83□□□□□ -2.54
HLA-DOBP13765 MIR3681-201ENST00000580089 72 ntBASIC-0.84□□□□□ -2.54
HLA-DOBP13765 MIR4490-201ENST00000582647 84 ntBASIC-0.84□□□□□ -2.54
HLA-DOBP13765 RNA5SP192-201ENST00000364404 120 ntBASIC-0.85□□□□□ -2.55
HLA-DOBP13765 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.85□□□□□ -2.55
HLA-DOBP13765 RNU6-940P-201ENST00000363433 104 ntBASIC-0.87□□□□□ -2.55
HLA-DOBP13765 RNU6-172P-201ENST00000411000 93 ntBASIC-0.87□□□□□ -2.55
HLA-DOBP13765 snoU83B.1-201ENST00000517136 88 ntBASIC-0.87□□□□□ -2.55
HLA-DOBP13765 MIR382-201ENST00000637119 76 ntBASIC-0.87□□□□□ -2.55
HLA-DOBP13765 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.88□□□□□ -2.55
HLA-DOBP13765 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.89□□□□□ -2.55
HLA-DOBP13765 RNU6-471P-201ENST00000383944 106 ntBASIC-0.89□□□□□ -2.55
HLA-DOBP13765 RNU6-995P-201ENST00000391244 107 ntBASIC-0.89□□□□□ -2.55
HLA-DOBP13765 AP002795.1-201ENST00000534879 84 ntBASIC-0.89□□□□□ -2.55
HLA-DOBP13765 MIR604-201ENST00000384880 94 ntBASIC-0.9□□□□□ -2.55
HLA-DOBP13765 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.91□□□□□ -2.56
HLA-DOBP13765 MIR224-201ENST00000384889 81 ntBASIC-0.91□□□□□ -2.56
HLA-DOBP13765 MIR29B1-201ENST00000385015 81 ntBASIC-0.91□□□□□ -2.56
HLA-DOBP13765 MIR507-201ENST00000385234 94 ntBASIC-0.91□□□□□ -2.56
HLA-DOBP13765 SNORD83B-201ENST00000386745 93 ntBASIC-0.91□□□□□ -2.56
HLA-DOBP13765 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.91□□□□□ -2.56
HLA-DOBP13765 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.92□□□□□ -2.56
HLA-DOBP13765 RNU6-231P-201ENST00000517122 103 ntBASIC-0.92□□□□□ -2.56
HLA-DOBP13765 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.92□□□□□ -2.56
HLA-DOBP13765 MIR7110-201ENST00000612638 86 ntBASIC-0.92□□□□□ -2.56
HLA-DOBP13765 AC110620.1-201ENST00000416042 228 ntBASIC-0.93□□□□□ -2.56
HLA-DOBP13765 RNU7-151P-201ENST00000516930 53 ntBASIC-0.93□□□□□ -2.56
HLA-DOBP13765 MIR4499-201ENST00000584834 69 ntBASIC-0.93□□□□□ -2.56
HLA-DOBP13765 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.94□□□□□ -2.56
HLA-DOBP13765 RNU6-669P-201ENST00000365575 107 ntBASIC-0.94□□□□□ -2.56
HLA-DOBP13765 MIR3170-201ENST00000582699 77 ntBASIC-0.94□□□□□ -2.56
HLA-DOBP13765 uc_338.19-201ENST00000616808 99 ntBASIC-0.94□□□□□ -2.56
HLA-DOBP13765 RNU7-119P-201ENST00000459279 63 ntBASIC-0.95□□□□□ -2.56
HLA-DOBP13765 RNU6-247P-201ENST00000362636 107 ntBASIC-0.97□□□□□ -2.56
HLA-DOBP13765 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.97□□□□□ -2.56
HLA-DOBP13765 MIR579-201ENST00000385221 98 ntBASIC-0.97□□□□□ -2.56
HLA-DOBP13765 RNU4-63P-201ENST00000411313 118 ntBASIC-0.97□□□□□ -2.56
HLA-DOBP13765 RNU7-160P-201ENST00000516660 62 ntBASIC-0.97□□□□□ -2.56
HLA-DOBP13765 MIR466-201ENST00000580653 84 ntBASIC-0.97□□□□□ -2.56
HLA-DOBP13765 MIR6818-201ENST00000621576 65 ntBASIC-0.97□□□□□ -2.56
HLA-DOBP13765 MIR7978-201ENST00000636158 59 ntBASIC-0.97□□□□□ -2.56
HLA-DOBP13765 RNA5SP26-201ENST00000362406 119 ntBASIC-0.98□□□□□ -2.57
HLA-DOBP13765 SNORD95.1-201ENST00000364099 68 ntBASIC-0.98□□□□□ -2.57
HLA-DOBP13765 RNU6-590P-201ENST00000365039 107 ntBASIC-0.98□□□□□ -2.57
HLA-DOBP13765 RNU6-758P-201ENST00000516292 89 ntBASIC-0.98□□□□□ -2.57
HLA-DOBP13765 MIR3938-201ENST00000582157 103 ntBASIC-0.98□□□□□ -2.57
HLA-DOBP13765 MIR520D-201ENST00000385002 87 ntBASIC-0.99□□□□□ -2.57
HLA-DOBP13765 Z95118.1-201ENST00000421372 247 ntBASIC-0.99□□□□□ -2.57
HLA-DOBP13765 SCARNA17-201ENST00000516183 144 ntBASIC-0.99□□□□□ -2.57
HLA-DOBP13765 RNY1P9-201ENST00000532431 109 ntBASIC-0.99□□□□□ -2.57
HLA-DOBP13765 RNU6-35P-201ENST00000384530 107 ntBASIC-1□□□□□ -2.57
HLA-DOBP13765 MIR125B1-201ENST00000385236 88 ntBASIC-1□□□□□ -2.57
HLA-DOBP13765 MT-TQ-201ENST00000387372 72 ntBASIC-1□□□□□ -2.57
HLA-DOBP13765 SNORD116.2-201ENST00000391251 93 ntBASIC-1□□□□□ -2.57
HLA-DOBP13765 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 433.5 ms