Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MIR224-201ENST00000384889 81 ntBASIC-0.11□□□□□ -2.43
SHOXO15266 MIR3938-201ENST00000582157 103 ntBASIC-0.11□□□□□ -2.43
SHOXO15266 MIR5704-201ENST00000584029 77 ntBASIC-0.11□□□□□ -2.43
SHOXO15266 MIR409-201ENST00000362237 79 ntBASIC-0.12□□□□□ -2.43
SHOXO15266 SNORD114-28-201ENST00000363610 72 ntBASIC-0.12□□□□□ -2.43
SHOXO15266 SNORD4A-201ENST00000459174 72 ntBASIC-0.12□□□□□ -2.43
SHOXO15266 MIR548AG1-201ENST00000579932 66 ntBASIC-0.12□□□□□ -2.43
SHOXO15266 MIR4464-201ENST00000580818 92 ntBASIC-0.12□□□□□ -2.43
SHOXO15266 MIR6888-201ENST00000621977 67 ntBASIC-0.12□□□□□ -2.43
SHOXO15266 AC093726.3-201ENST00000637588 150 ntBASIC-0.12□□□□□ -2.43
SHOXO15266 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.14□□□□□ -2.43
SHOXO15266 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.14□□□□□ -2.43
SHOXO15266 RNA5SP451-201ENST00000410588 110 ntBASIC-0.14□□□□□ -2.43
SHOXO15266 RNU7-119P-201ENST00000459279 63 ntBASIC-0.14□□□□□ -2.43
SHOXO15266 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.15□□□□□ -2.43
SHOXO15266 MIR6851-201ENST00000617060 67 ntBASIC-0.16□□□□□ -2.44
SHOXO15266 SNORD95.1-201ENST00000364099 68 ntBASIC-0.17□□□□□ -2.44
SHOXO15266 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
SHOXO15266 RNY1P9-201ENST00000532431 109 ntBASIC-0.17□□□□□ -2.44
SHOXO15266 MIR4280-201ENST00000582178 76 ntBASIC-0.17□□□□□ -2.44
SHOXO15266 AL590491.3-201ENST00000610731 82 ntBASIC-0.17□□□□□ -2.44
SHOXO15266 SNORD74.6-201ENST00000364796 70 ntBASIC-0.18□□□□□ -2.44
SHOXO15266 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.18□□□□□ -2.44
SHOXO15266 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.19□□□□□ -2.44
SHOXO15266 RNU6-499P-201ENST00000365615 107 ntBASIC-0.19□□□□□ -2.44
SHOXO15266 RNU6-520P-201ENST00000384717 104 ntBASIC-0.19□□□□□ -2.44
SHOXO15266 MIR1468-201ENST00000410600 86 ntBASIC-0.19□□□□□ -2.44
SHOXO15266 AC114755.3-201ENST00000481111 251 ntBASIC-0.19□□□□□ -2.44
SHOXO15266 MIR8068-201ENST00000618032 68 ntBASIC-0.19□□□□□ -2.44
SHOXO15266 RNU4-63P-201ENST00000411313 118 ntBASIC-0.2□□□□□ -2.44
SHOXO15266 SNORA13-201ENST00000458790 133 ntBASIC-0.2□□□□□ -2.44
SHOXO15266 RNU6-231P-201ENST00000517122 103 ntBASIC-0.2□□□□□ -2.44
SHOXO15266 MIR3681-201ENST00000580089 72 ntBASIC-0.2□□□□□ -2.44
SHOXO15266 MIR4788-201ENST00000639104 80 ntBASIC-0.2□□□□□ -2.44
SHOXO15266 MIR124-2-201ENST00000385081 109 ntBASIC-0.21□□□□□ -2.44
SHOXO15266 RNU6-696P-201ENST00000390834 107 ntBASIC-0.21□□□□□ -2.44
SHOXO15266 SNORD1B-201ENST00000363091 84 ntBASIC-0.22□□□□□ -2.44
SHOXO15266 MIR204-201ENST00000385200 110 ntBASIC-0.22□□□□□ -2.44
SHOXO15266 RNA5SP300-201ENST00000391197 107 ntBASIC-0.22□□□□□ -2.44
SHOXO15266 MIR7110-201ENST00000612638 86 ntBASIC-0.22□□□□□ -2.44
SHOXO15266 MIR518B-201ENST00000385127 83 ntBASIC-0.23□□□□□ -2.45
SHOXO15266 SNORD38.3-201ENST00000516599 73 ntBASIC-0.23□□□□□ -2.45
SHOXO15266 RNU6-172P-201ENST00000411000 93 ntBASIC-0.24□□□□□ -2.45
SHOXO15266 SNX3P1X-201ENST00000414887 175 ntBASIC-0.24□□□□□ -2.45
SHOXO15266 U7.5-201ENST00000517224 61 ntBASIC-0.24□□□□□ -2.45
SHOXO15266 MIR633-201ENST00000384821 98 ntBASIC-0.25□□□□□ -2.45
SHOXO15266 RNU7-88P-201ENST00000458752 63 ntBASIC-0.26□□□□□ -2.45
SHOXO15266 RNU6-598P-201ENST00000364017 105 ntBASIC-0.27□□□□□ -2.45
SHOXO15266 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.27□□□□□ -2.45
SHOXO15266 SNORD18.2-201ENST00000459604 70 ntBASIC-0.27□□□□□ -2.45
SHOXO15266 MIR4723-201ENST00000585070 81 ntBASIC-0.27□□□□□ -2.45
SHOXO15266 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.28□□□□□ -2.45
SHOXO15266 SNORD116.2-201ENST00000391251 93 ntBASIC-0.28□□□□□ -2.45
SHOXO15266 SNORD75.1-201ENST00000408373 60 ntBASIC-0.28□□□□□ -2.45
SHOXO15266 AC079150.2-201ENST00000443733 78 ntBASIC-0.28□□□□□ -2.45
SHOXO15266 SNORD63.1-201ENST00000516178 80 ntBASIC-0.28□□□□□ -2.45
SHOXO15266 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.28□□□□□ -2.45
SHOXO15266 MIR548AA1-201ENST00000384971 97 ntBASIC-0.29□□□□□ -2.46
SHOXO15266 RNU6-995P-201ENST00000391244 107 ntBASIC-0.29□□□□□ -2.46
SHOXO15266 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.29□□□□□ -2.46
SHOXO15266 RNU6-732P-201ENST00000516033 103 ntBASIC-0.3□□□□□ -2.46
SHOXO15266 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.3□□□□□ -2.46
SHOXO15266 RNA5SP275-201ENST00000363936 118 ntBASIC-0.32□□□□□ -2.46
SHOXO15266 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.32□□□□□ -2.46
SHOXO15266 SNORD22.1-201ENST00000516331 125 ntBASIC-0.32□□□□□ -2.46
SHOXO15266 MIR548AX-201ENST00000580117 73 ntBASIC-0.32□□□□□ -2.46
SHOXO15266 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.32□□□□□ -2.46
SHOXO15266 U2.18-201ENST00000622185 84 ntBASIC-0.32□□□□□ -2.46
SHOXO15266 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
SHOXO15266 RNU6-829P-201ENST00000363700 112 ntBASIC-0.34□□□□□ -2.46
SHOXO15266 SNORA40B-201ENST00000385573 128 ntBASIC-0.34□□□□□ -2.46
SHOXO15266 AC021146.6-201ENST00000514659 117 ntBASIC-0.34□□□□□ -2.46
SHOXO15266 MIR3179-1-201ENST00000578940 84 ntBASIC-0.34□□□□□ -2.46
SHOXO15266 MIR3179-2-201ENST00000579107 84 ntBASIC-0.34□□□□□ -2.46
SHOXO15266 MIR3179-3-201ENST00000579566 84 ntBASIC-0.34□□□□□ -2.46
SHOXO15266 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.34□□□□□ -2.46
SHOXO15266 MIR3179-4-201ENST00000617599 84 ntBASIC-0.34□□□□□ -2.46
SHOXO15266 SNORD114-11-201ENST00000363738 75 ntBASIC-0.35□□□□□ -2.47
SHOXO15266 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.35□□□□□ -2.47
SHOXO15266 RNU7-160P-201ENST00000516660 62 ntBASIC-0.35□□□□□ -2.47
SHOXO15266 MIR548AZ-201ENST00000616567 95 ntBASIC-0.35□□□□□ -2.47
SHOXO15266 U4.2-201ENST00000618561 85 ntBASIC-0.36□□□□□ -2.47
SHOXO15266 RNU6-810P-201ENST00000364001 107 ntBASIC-0.38□□□□□ -2.47
SHOXO15266 SNORA32.3-201ENST00000384772 121 ntBASIC-0.38□□□□□ -2.47
SHOXO15266 RNU7-151P-201ENST00000516930 53 ntBASIC-0.38□□□□□ -2.47
SHOXO15266 RNU6-446P-201ENST00000362827 106 ntBASIC-0.39□□□□□ -2.47
SHOXO15266 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
SHOXO15266 AP000533.3-201ENST00000447704 118 ntBASIC-0.4□□□□□ -2.47
SHOXO15266 SNORA40.16-201ENST00000517238 121 ntBASIC-0.4□□□□□ -2.47
SHOXO15266 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.41□□□□□ -2.48
SHOXO15266 SNORA26.4-201ENST00000391188 123 ntBASIC-0.41□□□□□ -2.48
SHOXO15266 SNORD115-33-201ENST00000363723 82 ntBASIC-0.42□□□□□ -2.48
SHOXO15266 RNU6-614P-201ENST00000384369 107 ntBASIC-0.42□□□□□ -2.48
SHOXO15266 MIR579-201ENST00000385221 98 ntBASIC-0.42□□□□□ -2.48
SHOXO15266 MIR601-201ENST00000385256 79 ntBASIC-0.42□□□□□ -2.48
SHOXO15266 MTND4LP19-201ENST00000403051 166 ntBASIC-0.42□□□□□ -2.48
SHOXO15266 MIR548Q-201ENST00000408404 100 ntBASIC-0.42□□□□□ -2.48
SHOXO15266 RNA5SP169-201ENST00000517268 117 ntBASIC-0.42□□□□□ -2.48
SHOXO15266 U6.59-201ENST00000615686 107 ntBASIC-0.42□□□□□ -2.48
SHOXO15266 MIR4320-201ENST00000636981 65 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 264.4 ms