Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.36□□□□□ -2.79
SDCBPO00560 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.36□□□□□ -2.79
SDCBPO00560 SNORD115-31-201ENST00000365318 82 ntBASIC-2.36□□□□□ -2.79
SDCBPO00560 SNORD116-14-201ENST00000383894 92 ntBASIC-2.36□□□□□ -2.79
SDCBPO00560 SNORD116-17-201ENST00000383929 92 ntBASIC-2.36□□□□□ -2.79
SDCBPO00560 SNORD116-15-201ENST00000384445 92 ntBASIC-2.36□□□□□ -2.79
SDCBPO00560 SNORD116-19-201ENST00000384729 92 ntBASIC-2.36□□□□□ -2.79
SDCBPO00560 MIR579-201ENST00000385221 98 ntBASIC-2.36□□□□□ -2.79
SDCBPO00560 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.37□□□□□ -2.79
SDCBPO00560 RNU6-668P-201ENST00000364180 107 ntBASIC-2.37□□□□□ -2.79
SDCBPO00560 RNU6-219P-201ENST00000364728 107 ntBASIC-2.37□□□□□ -2.79
SDCBPO00560 RNY3P8-201ENST00000411366 126 ntBASIC-2.37□□□□□ -2.79
SDCBPO00560 RNU6-267P-201ENST00000516714 103 ntBASIC-2.37□□□□□ -2.79
SDCBPO00560 RNU6-255P-201ENST00000516957 105 ntBASIC-2.37□□□□□ -2.79
SDCBPO00560 MIR7978-201ENST00000636158 59 ntBASIC-2.37□□□□□ -2.79
SDCBPO00560 SNORD113.1-201ENST00000363280 73 ntBASIC-2.38□□□□□ -2.79
SDCBPO00560 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.38□□□□□ -2.79
SDCBPO00560 RNU6-995P-201ENST00000391244 107 ntBASIC-2.38□□□□□ -2.79
SDCBPO00560 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.38□□□□□ -2.79
SDCBPO00560 AP001094.1-201ENST00000579805 193 ntBASIC-2.38□□□□□ -2.79
SDCBPO00560 MIR548W-201ENST00000581970 74 ntBASIC-2.38□□□□□ -2.79
SDCBPO00560 RNY1P5-201ENST00000383890 115 ntBASIC-2.39□□□□□ -2.79
SDCBPO00560 MT-TG-201ENST00000387429 68 ntBASIC-2.39□□□□□ -2.79
SDCBPO00560 RNY4P18-201ENST00000391107 89 ntBASIC-2.39□□□□□ -2.79
SDCBPO00560 snoU13.10-201ENST00000459301 103 ntBASIC-2.39□□□□□ -2.79
SDCBPO00560 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.39□□□□□ -2.79
SDCBPO00560 MIR548BB-201ENST00000626714 66 ntBASIC-2.39□□□□□ -2.79
SDCBPO00560 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.4□□□□□ -2.79
SDCBPO00560 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.41□□□□□ -2.8
SDCBPO00560 RNU6-974P-201ENST00000384099 108 ntBASIC-2.41□□□□□ -2.8
SDCBPO00560 SNORD45A-201ENST00000384512 84 ntBASIC-2.41□□□□□ -2.8
SDCBPO00560 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.41□□□□□ -2.8
SDCBPO00560 RNU6-402P-201ENST00000410678 103 ntBASIC-2.41□□□□□ -2.8
SDCBPO00560 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.42□□□□□ -2.8
SDCBPO00560 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.42□□□□□ -2.8
SDCBPO00560 MIR125B1-201ENST00000385236 88 ntBASIC-2.42□□□□□ -2.8
SDCBPO00560 RNU6-129P-201ENST00000391022 107 ntBASIC-2.42□□□□□ -2.8
SDCBPO00560 RNU6-172P-201ENST00000411000 93 ntBASIC-2.42□□□□□ -2.8
SDCBPO00560 RNU6-523P-201ENST00000516304 54 ntBASIC-2.42□□□□□ -2.8
SDCBPO00560 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.43□□□□□ -2.8
SDCBPO00560 SNORD116-22-201ENST00000384430 92 ntBASIC-2.43□□□□□ -2.8
SDCBPO00560 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.43□□□□□ -2.8
SDCBPO00560 MIR8053-201ENST00000613344 75 ntBASIC-2.43□□□□□ -2.8
SDCBPO00560 MIR664A-201ENST00000626086 82 ntBASIC-2.43□□□□□ -2.8
SDCBPO00560 RNA5SP405-201ENST00000363059 114 ntBASIC-2.44□□□□□ -2.8
SDCBPO00560 RNA5SP173-201ENST00000364857 136 ntBASIC-2.44□□□□□ -2.8
SDCBPO00560 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.44□□□□□ -2.8
SDCBPO00560 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.44□□□□□ -2.8
SDCBPO00560 RNY4P27-201ENST00000363341 96 ntBASIC-2.45□□□□□ -2.8
SDCBPO00560 RNU6-194P-201ENST00000363862 105 ntBASIC-2.46□□□□□ -2.8
SDCBPO00560 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.46□□□□□ -2.8
SDCBPO00560 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.46□□□□□ -2.8
SDCBPO00560 MIR1297-201ENST00000637311 77 ntBASIC-2.46□□□□□ -2.8
SDCBPO00560 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.47□□□□□ -2.8
SDCBPO00560 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.47□□□□□ -2.8
SDCBPO00560 AP001318.4-201ENST00000616637 121 ntBASIC-2.48□□□□□ -2.81
SDCBPO00560 SNORA63.4-201ENST00000362763 126 ntBASIC-2.49□□□□□ -2.81
SDCBPO00560 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.49□□□□□ -2.81
SDCBPO00560 MIR581-201ENST00000384895 96 ntBASIC-2.49□□□□□ -2.81
SDCBPO00560 RNU6-118P-201ENST00000516552 102 ntBASIC-2.49□□□□□ -2.81
SDCBPO00560 MIR2052-201ENST00000636055 55 ntBASIC-2.49□□□□□ -2.81
SDCBPO00560 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.5□□□□□ -2.81
SDCBPO00560 SNORD18C-201ENST00000362704 69 ntBASIC-2.51□□□□□ -2.81
SDCBPO00560 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.51□□□□□ -2.81
SDCBPO00560 MALAT1.1-201ENST00000618249 95 ntBASIC-2.51□□□□□ -2.81
SDCBPO00560 RNU6-755P-201ENST00000364400 103 ntBASIC-2.52□□□□□ -2.81
SDCBPO00560 MIR1207-201ENST00000408249 87 ntBASIC-2.52□□□□□ -2.81
SDCBPO00560 RNU6-589P-201ENST00000516485 107 ntBASIC-2.52□□□□□ -2.81
SDCBPO00560 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.53□□□□□ -2.81
SDCBPO00560 MIR4723-201ENST00000585070 81 ntBASIC-2.53□□□□□ -2.81
SDCBPO00560 RNU6-694P-201ENST00000364071 147 ntBASIC-2.54□□□□□ -2.82
SDCBPO00560 SNORD116-24-201ENST00000384549 92 ntBASIC-2.54□□□□□ -2.82
SDCBPO00560 MIR466-201ENST00000580653 84 ntBASIC-2.55□□□□□ -2.82
SDCBPO00560 AC006160.2-201ENST00000637708 154 ntBASIC-2.55□□□□□ -2.82
SDCBPO00560 MIR450A1-201ENST00000362262 91 ntBASIC-2.56□□□□□ -2.82
SDCBPO00560 RNU6-520P-201ENST00000384717 104 ntBASIC-2.56□□□□□ -2.82
SDCBPO00560 MIR4748-201ENST00000578076 82 ntBASIC-2.56□□□□□ -2.82
SDCBPO00560 MIR202-201ENST00000362219 110 ntBASIC-2.57□□□□□ -2.82
SDCBPO00560 MIR3139-201ENST00000579145 76 ntBASIC-2.57□□□□□ -2.82
SDCBPO00560 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.57□□□□□ -2.82
SDCBPO00560 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.58□□□□□ -2.82
SDCBPO00560 RNU6-675P-201ENST00000384236 104 ntBASIC-2.58□□□□□ -2.82
SDCBPO00560 RNU6-380P-201ENST00000410207 107 ntBASIC-2.58□□□□□ -2.82
SDCBPO00560 AC097484.2-201ENST00000509147 251 ntBASIC-2.58□□□□□ -2.82
SDCBPO00560 RNU6-649P-201ENST00000384463 107 ntBASIC-2.59□□□□□ -2.82
SDCBPO00560 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.59□□□□□ -2.82
SDCBPO00560 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.59□□□□□ -2.82
SDCBPO00560 FTX_4.1-201ENST00000616291 147 ntBASIC-2.59□□□□□ -2.82
SDCBPO00560 RNY1P1-201ENST00000364372 112 ntBASIC-2.6□□□□□ -2.83
SDCBPO00560 MIR548N-201ENST00000408742 75 ntBASIC-2.6□□□□□ -2.83
SDCBPO00560 RNU6-789P-201ENST00000517105 102 ntBASIC-2.6□□□□□ -2.83
SDCBPO00560 MIR488-201ENST00000365739 83 ntBASIC-2.61□□□□□ -2.83
SDCBPO00560 SNORD60-201ENST00000383903 83 ntBASIC-2.61□□□□□ -2.83
SDCBPO00560 AL031737.1-201ENST00000450125 223 ntBASIC-2.61□□□□□ -2.83
SDCBPO00560 RNU7-160P-201ENST00000516660 62 ntBASIC-2.61□□□□□ -2.83
SDCBPO00560 RNU6-315P-201ENST00000362666 107 ntBASIC-2.62□□□□□ -2.83
SDCBPO00560 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.62□□□□□ -2.83
SDCBPO00560 RNU6-959P-201ENST00000384671 107 ntBASIC-2.62□□□□□ -2.83
SDCBPO00560 SNORA40.13-201ENST00000516379 120 ntBASIC-2.62□□□□□ -2.83
SDCBPO00560 AL365222.1-201ENST00000614661 98 ntBASIC-2.62□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms