Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.98□□□□□ -2.57
TRAV40A0A0B4J280 SNORA41B-201ENST00000384785 128 ntBASIC-0.98□□□□□ -2.57
TRAV40A0A0B4J280 MIR8485-201ENST00000401372 91 ntBASIC-0.98□□□□□ -2.57
TRAV40A0A0B4J280 SCARNA17-201ENST00000516183 144 ntBASIC-0.98□□□□□ -2.57
TRAV40A0A0B4J280 MIR378F-201ENST00000578143 78 ntBASIC-0.98□□□□□ -2.57
TRAV40A0A0B4J280 AC062037.1-201ENST00000605302 128 ntBASIC-0.98□□□□□ -2.57
TRAV40A0A0B4J280 MIR520D-201ENST00000385002 87 ntBASIC-0.99□□□□□ -2.57
TRAV40A0A0B4J280 MIR450A2-201ENST00000385022 100 ntBASIC-0.99□□□□□ -2.57
TRAV40A0A0B4J280 MTND4LP1-201ENST00000446263 157 ntBASIC-0.99□□□□□ -2.57
TRAV40A0A0B4J280 RNU6-70P-201ENST00000516438 60 ntBASIC-0.99□□□□□ -2.57
TRAV40A0A0B4J280 RNY1P9-201ENST00000532431 109 ntBASIC-0.99□□□□□ -2.57
TRAV40A0A0B4J280 MIR8053-201ENST00000613344 75 ntBASIC-0.99□□□□□ -2.57
TRAV40A0A0B4J280 RNU6-696P-201ENST00000390834 107 ntBASIC-1□□□□□ -2.57
TRAV40A0A0B4J280 RNU6-380P-201ENST00000410207 107 ntBASIC-1□□□□□ -2.57
TRAV40A0A0B4J280 RNA5SP266-201ENST00000410273 108 ntBASIC-1□□□□□ -2.57
TRAV40A0A0B4J280 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.01□□□□□ -2.57
TRAV40A0A0B4J280 MIR29B1-201ENST00000385015 81 ntBASIC-1.01□□□□□ -2.57
TRAV40A0A0B4J280 RNU6-630P-201ENST00000391258 106 ntBASIC-1.01□□□□□ -2.57
TRAV40A0A0B4J280 SNORD57-201ENST00000448188 72 ntBASIC-1.01□□□□□ -2.57
TRAV40A0A0B4J280 MIR4666B-201ENST00000578142 81 ntBASIC-1.01□□□□□ -2.57
TRAV40A0A0B4J280 AL627230.5-201ENST00000619807 58 ntBASIC-1.01□□□□□ -2.57
TRAV40A0A0B4J280 RNA5SP331-201ENST00000364986 107 ntBASIC-1.02□□□□□ -2.57
TRAV40A0A0B4J280 AC090616.4-201ENST00000448026 115 ntBASIC-1.02□□□□□ -2.57
TRAV40A0A0B4J280 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.02□□□□□ -2.57
TRAV40A0A0B4J280 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.02□□□□□ -2.57
TRAV40A0A0B4J280 RNA5SP215-201ENST00000363440 122 ntBASIC-1.03□□□□□ -2.57
TRAV40A0A0B4J280 RNU6-242P-201ENST00000384359 107 ntBASIC-1.03□□□□□ -2.57
TRAV40A0A0B4J280 MIR154-201ENST00000385243 84 ntBASIC-1.03□□□□□ -2.57
TRAV40A0A0B4J280 MIR4490-201ENST00000582647 84 ntBASIC-1.03□□□□□ -2.57
TRAV40A0A0B4J280 MIR6874-201ENST00000635894 71 ntBASIC-1.03□□□□□ -2.57
TRAV40A0A0B4J280 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.04□□□□□ -2.58
TRAV40A0A0B4J280 RNU6-608P-201ENST00000383927 104 ntBASIC-1.04□□□□□ -2.58
TRAV40A0A0B4J280 SNORD116-16-201ENST00000384533 92 ntBASIC-1.04□□□□□ -2.58
TRAV40A0A0B4J280 RNU6-687P-201ENST00000516443 89 ntBASIC-1.04□□□□□ -2.58
TRAV40A0A0B4J280 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.04□□□□□ -2.58
TRAV40A0A0B4J280 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.05□□□□□ -2.58
TRAV40A0A0B4J280 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.05□□□□□ -2.58
TRAV40A0A0B4J280 MIR889-201ENST00000401280 79 ntBASIC-1.05□□□□□ -2.58
TRAV40A0A0B4J280 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.05□□□□□ -2.58
TRAV40A0A0B4J280 AC091912.2-201ENST00000624798 167 ntBASIC-1.05□□□□□ -2.58
TRAV40A0A0B4J280 SNORD1B-201ENST00000363091 84 ntBASIC-1.06□□□□□ -2.58
TRAV40A0A0B4J280 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.06□□□□□ -2.58
TRAV40A0A0B4J280 MIR4324-201ENST00000584846 72 ntBASIC-1.06□□□□□ -2.58
TRAV40A0A0B4J280 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.07□□□□□ -2.58
TRAV40A0A0B4J280 RNU6-895P-201ENST00000384125 103 ntBASIC-1.07□□□□□ -2.58
TRAV40A0A0B4J280 RNU6-258P-201ENST00000390884 101 ntBASIC-1.08□□□□□ -2.58
TRAV40A0A0B4J280 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.08□□□□□ -2.58
TRAV40A0A0B4J280 MIR6738-201ENST00000619620 64 ntBASIC-1.08□□□□□ -2.58
TRAV40A0A0B4J280 RNU6-164P-201ENST00000364604 103 ntBASIC-1.09□□□□□ -2.58
TRAV40A0A0B4J280 RNU6-573P-201ENST00000383938 106 ntBASIC-1.09□□□□□ -2.58
TRAV40A0A0B4J280 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.09□□□□□ -2.58
TRAV40A0A0B4J280 RNU6-576P-201ENST00000390854 102 ntBASIC-1.09□□□□□ -2.58
TRAV40A0A0B4J280 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.09□□□□□ -2.58
TRAV40A0A0B4J280 MIR3170-201ENST00000582699 77 ntBASIC-1.09□□□□□ -2.58
TRAV40A0A0B4J280 SNORD73B-201ENST00000364394 72 ntBASIC-1.1□□□□□ -2.59
TRAV40A0A0B4J280 RNU6-820P-201ENST00000384273 107 ntBASIC-1.1□□□□□ -2.59
TRAV40A0A0B4J280 MIR579-201ENST00000385221 98 ntBASIC-1.1□□□□□ -2.59
TRAV40A0A0B4J280 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
TRAV40A0A0B4J280 MIR429-201ENST00000362106 83 ntBASIC-1.11□□□□□ -2.59
TRAV40A0A0B4J280 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.12□□□□□ -2.59
TRAV40A0A0B4J280 RNA5SP170-201ENST00000517150 101 ntBASIC-1.12□□□□□ -2.59
TRAV40A0A0B4J280 MIR4306-201ENST00000583390 91 ntBASIC-1.12□□□□□ -2.59
TRAV40A0A0B4J280 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.13□□□□□ -2.59
TRAV40A0A0B4J280 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.13□□□□□ -2.59
TRAV40A0A0B4J280 RNU6-540P-201ENST00000384622 101 ntBASIC-1.13□□□□□ -2.59
TRAV40A0A0B4J280 MIR587-201ENST00000384845 96 ntBASIC-1.13□□□□□ -2.59
TRAV40A0A0B4J280 RNU7-151P-201ENST00000516930 53 ntBASIC-1.13□□□□□ -2.59
TRAV40A0A0B4J280 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.13□□□□□ -2.59
TRAV40A0A0B4J280 RNA5SP173-201ENST00000364857 136 ntBASIC-1.14□□□□□ -2.59
TRAV40A0A0B4J280 MIR548AA1-201ENST00000384971 97 ntBASIC-1.14□□□□□ -2.59
TRAV40A0A0B4J280 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.14□□□□□ -2.59
TRAV40A0A0B4J280 RNU6-172P-201ENST00000411000 93 ntBASIC-1.14□□□□□ -2.59
TRAV40A0A0B4J280 RNU6-523P-201ENST00000516304 54 ntBASIC-1.14□□□□□ -2.59
TRAV40A0A0B4J280 RNU6-228P-201ENST00000362700 106 ntBASIC-1.15□□□□□ -2.59
TRAV40A0A0B4J280 RNU6-411P-201ENST00000384451 107 ntBASIC-1.15□□□□□ -2.59
TRAV40A0A0B4J280 RNU6-24P-201ENST00000384440 107 ntBASIC-1.16□□□□□ -2.6
TRAV40A0A0B4J280 MIR1255A-201ENST00000408338 113 ntBASIC-1.16□□□□□ -2.6
TRAV40A0A0B4J280 U7.4-201ENST00000614961 63 ntBASIC-1.16□□□□□ -2.6
TRAV40A0A0B4J280 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.16□□□□□ -2.6
TRAV40A0A0B4J280 MIR7978-201ENST00000636158 59 ntBASIC-1.16□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-563P-201ENST00000364872 108 ntBASIC-1.17□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-10P-201ENST00000384036 107 ntBASIC-1.17□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-974P-201ENST00000384099 108 ntBASIC-1.17□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.17□□□□□ -2.6
TRAV40A0A0B4J280 RNY4P29-201ENST00000410801 97 ntBASIC-1.17□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.18□□□□□ -2.6
TRAV40A0A0B4J280 MIR6502-201ENST00000617296 76 ntBASIC-1.18□□□□□ -2.6
TRAV40A0A0B4J280 SNORD60.1-201ENST00000362451 73 ntBASIC-1.19□□□□□ -2.6
TRAV40A0A0B4J280 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.19□□□□□ -2.6
TRAV40A0A0B4J280 AC018880.2-201ENST00000414265 201 ntBASIC-1.19□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-634P-201ENST00000459134 106 ntBASIC-1.19□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-542P-201ENST00000516405 103 ntBASIC-1.19□□□□□ -2.6
TRAV40A0A0B4J280 MIR4520-1-201ENST00000582609 70 ntBASIC-1.19□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-247P-201ENST00000362636 107 ntBASIC-1.2□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.2□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-663P-201ENST00000391105 106 ntBASIC-1.2□□□□□ -2.6
TRAV40A0A0B4J280 MIR3115-201ENST00000577915 68 ntBASIC-1.2□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-92P-201ENST00000605893 104 ntBASIC-1.2□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-79P-201ENST00000362511 107 ntBASIC-1.21□□□□□ -2.6
TRAV40A0A0B4J280 RNU6-669P-201ENST00000365575 107 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms