Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.4□□□□□ -2.79
TRAV38-1A0A0B4J264 SNORA27.2-201ENST00000363365 126 ntBASIC-2.41□□□□□ -2.8
TRAV38-1A0A0B4J264 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.41□□□□□ -2.8
TRAV38-1A0A0B4J264 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.41□□□□□ -2.8
TRAV38-1A0A0B4J264 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.42□□□□□ -2.8
TRAV38-1A0A0B4J264 RNY4P27-201ENST00000363341 96 ntBASIC-2.43□□□□□ -2.8
TRAV38-1A0A0B4J264 RNU6-668P-201ENST00000364180 107 ntBASIC-2.43□□□□□ -2.8
TRAV38-1A0A0B4J264 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.43□□□□□ -2.8
TRAV38-1A0A0B4J264 RNU7-151P-201ENST00000516930 53 ntBASIC-2.43□□□□□ -2.8
TRAV38-1A0A0B4J264 RNU6-255P-201ENST00000516957 105 ntBASIC-2.43□□□□□ -2.8
TRAV38-1A0A0B4J264 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.43□□□□□ -2.8
TRAV38-1A0A0B4J264 RNU6-219P-201ENST00000364728 107 ntBASIC-2.44□□□□□ -2.8
TRAV38-1A0A0B4J264 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.44□□□□□ -2.8
TRAV38-1A0A0B4J264 RNU6-907P-201ENST00000390924 102 ntBASIC-2.44□□□□□ -2.8
TRAV38-1A0A0B4J264 RNU6-995P-201ENST00000391244 107 ntBASIC-2.44□□□□□ -2.8
TRAV38-1A0A0B4J264 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.44□□□□□ -2.8
TRAV38-1A0A0B4J264 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.44□□□□□ -2.8
TRAV38-1A0A0B4J264 SNORD113.1-201ENST00000363280 73 ntBASIC-2.45□□□□□ -2.8
TRAV38-1A0A0B4J264 RNU6-669P-201ENST00000365575 107 ntBASIC-2.45□□□□□ -2.8
TRAV38-1A0A0B4J264 RNY4P18-201ENST00000391107 89 ntBASIC-2.45□□□□□ -2.8
TRAV38-1A0A0B4J264 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.46□□□□□ -2.8
TRAV38-1A0A0B4J264 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.46□□□□□ -2.8
TRAV38-1A0A0B4J264 SNORD63.2-201ENST00000516303 64 ntBASIC-2.46□□□□□ -2.8
TRAV38-1A0A0B4J264 MIR548BB-201ENST00000626714 66 ntBASIC-2.46□□□□□ -2.8
TRAV38-1A0A0B4J264 MIR7978-201ENST00000636158 59 ntBASIC-2.46□□□□□ -2.8
TRAV38-1A0A0B4J264 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.47□□□□□ -2.8
TRAV38-1A0A0B4J264 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.47□□□□□ -2.8
TRAV38-1A0A0B4J264 SNORD116-22-201ENST00000384430 92 ntBASIC-2.47□□□□□ -2.8
TRAV38-1A0A0B4J264 RNU6-267P-201ENST00000516714 103 ntBASIC-2.47□□□□□ -2.8
TRAV38-1A0A0B4J264 MIR4484-201ENST00000582855 83 ntBASIC-2.47□□□□□ -2.8
TRAV38-1A0A0B4J264 MIR8053-201ENST00000613344 75 ntBASIC-2.47□□□□□ -2.8
TRAV38-1A0A0B4J264 U6.97-201ENST00000636904 101 ntBASIC-2.47□□□□□ -2.8
TRAV38-1A0A0B4J264 MIR1297-201ENST00000637311 77 ntBASIC-2.47□□□□□ -2.8
TRAV38-1A0A0B4J264 RNA5SP173-201ENST00000364857 136 ntBASIC-2.48□□□□□ -2.81
TRAV38-1A0A0B4J264 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.48□□□□□ -2.81
TRAV38-1A0A0B4J264 RNU6-129P-201ENST00000391022 107 ntBASIC-2.48□□□□□ -2.81
TRAV38-1A0A0B4J264 SNORD115-31-201ENST00000365318 82 ntBASIC-2.49□□□□□ -2.81
TRAV38-1A0A0B4J264 MIR579-201ENST00000385221 98 ntBASIC-2.49□□□□□ -2.81
TRAV38-1A0A0B4J264 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.49□□□□□ -2.81
TRAV38-1A0A0B4J264 RNU6-402P-201ENST00000410678 103 ntBASIC-2.49□□□□□ -2.81
TRAV38-1A0A0B4J264 MIR548W-201ENST00000581970 74 ntBASIC-2.49□□□□□ -2.81
TRAV38-1A0A0B4J264 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.5□□□□□ -2.81
TRAV38-1A0A0B4J264 MIR125B1-201ENST00000385236 88 ntBASIC-2.5□□□□□ -2.81
TRAV38-1A0A0B4J264 RNU6-523P-201ENST00000516304 54 ntBASIC-2.5□□□□□ -2.81
TRAV38-1A0A0B4J264 SNORD45A-201ENST00000384512 84 ntBASIC-2.51□□□□□ -2.81
TRAV38-1A0A0B4J264 RNY3P8-201ENST00000411366 126 ntBASIC-2.51□□□□□ -2.81
TRAV38-1A0A0B4J264 MIR2052-201ENST00000636055 55 ntBASIC-2.51□□□□□ -2.81
TRAV38-1A0A0B4J264 RNU6-172P-201ENST00000411000 93 ntBASIC-2.52□□□□□ -2.81
TRAV38-1A0A0B4J264 snoU13.10-201ENST00000459301 103 ntBASIC-2.52□□□□□ -2.81
TRAV38-1A0A0B4J264 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.53□□□□□ -2.81
TRAV38-1A0A0B4J264 RNU6-694P-201ENST00000364071 147 ntBASIC-2.53□□□□□ -2.81
TRAV38-1A0A0B4J264 RNA5SP405-201ENST00000363059 114 ntBASIC-2.54□□□□□ -2.82
TRAV38-1A0A0B4J264 RNU6-974P-201ENST00000384099 108 ntBASIC-2.54□□□□□ -2.82
TRAV38-1A0A0B4J264 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.54□□□□□ -2.82
TRAV38-1A0A0B4J264 SNORA63.4-201ENST00000362763 126 ntBASIC-2.55□□□□□ -2.82
TRAV38-1A0A0B4J264 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.55□□□□□ -2.82
TRAV38-1A0A0B4J264 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.55□□□□□ -2.82
TRAV38-1A0A0B4J264 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.55□□□□□ -2.82
TRAV38-1A0A0B4J264 RNU6-755P-201ENST00000364400 103 ntBASIC-2.56□□□□□ -2.82
TRAV38-1A0A0B4J264 RNU6-589P-201ENST00000516485 107 ntBASIC-2.56□□□□□ -2.82
TRAV38-1A0A0B4J264 MIR664A-201ENST00000626086 82 ntBASIC-2.56□□□□□ -2.82
TRAV38-1A0A0B4J264 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.57□□□□□ -2.82
TRAV38-1A0A0B4J264 MALAT1.1-201ENST00000618249 95 ntBASIC-2.57□□□□□ -2.82
TRAV38-1A0A0B4J264 SNORD18C-201ENST00000362704 69 ntBASIC-2.58□□□□□ -2.82
TRAV38-1A0A0B4J264 RNU6-194P-201ENST00000363862 105 ntBASIC-2.58□□□□□ -2.82
TRAV38-1A0A0B4J264 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.58□□□□□ -2.82
TRAV38-1A0A0B4J264 AP001318.4-201ENST00000616637 121 ntBASIC-2.59□□□□□ -2.82
TRAV38-1A0A0B4J264 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.6□□□□□ -2.83
TRAV38-1A0A0B4J264 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.6□□□□□ -2.83
TRAV38-1A0A0B4J264 MIR581-201ENST00000384895 96 ntBASIC-2.6□□□□□ -2.83
TRAV38-1A0A0B4J264 RNU6-380P-201ENST00000410207 107 ntBASIC-2.6□□□□□ -2.83
TRAV38-1A0A0B4J264 RNU6-118P-201ENST00000516552 102 ntBASIC-2.6□□□□□ -2.83
TRAV38-1A0A0B4J264 AC006160.2-201ENST00000637708 154 ntBASIC-2.6□□□□□ -2.83
TRAV38-1A0A0B4J264 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.62□□□□□ -2.83
TRAV38-1A0A0B4J264 RNU6-675P-201ENST00000384236 104 ntBASIC-2.63□□□□□ -2.83
TRAV38-1A0A0B4J264 SNORD116-24-201ENST00000384549 92 ntBASIC-2.63□□□□□ -2.83
TRAV38-1A0A0B4J264 MIR466-201ENST00000580653 84 ntBASIC-2.63□□□□□ -2.83
TRAV38-1A0A0B4J264 MIR4748-201ENST00000578076 82 ntBASIC-2.64□□□□□ -2.83
TRAV38-1A0A0B4J264 RNU6-520P-201ENST00000384717 104 ntBASIC-2.65□□□□□ -2.83
TRAV38-1A0A0B4J264 MIR450A1-201ENST00000362262 91 ntBASIC-2.66□□□□□ -2.84
TRAV38-1A0A0B4J264 RNU6-315P-201ENST00000362666 107 ntBASIC-2.66□□□□□ -2.84
TRAV38-1A0A0B4J264 RNY1P1-201ENST00000364372 112 ntBASIC-2.66□□□□□ -2.84
TRAV38-1A0A0B4J264 RNU6-959P-201ENST00000384671 107 ntBASIC-2.66□□□□□ -2.84
TRAV38-1A0A0B4J264 AC008267.6-201ENST00000441664 139 ntBASIC-2.66□□□□□ -2.84
TRAV38-1A0A0B4J264 AL031737.1-201ENST00000450125 223 ntBASIC-2.66□□□□□ -2.84
TRAV38-1A0A0B4J264 SNORA40.13-201ENST00000516379 120 ntBASIC-2.66□□□□□ -2.84
TRAV38-1A0A0B4J264 RNU7-160P-201ENST00000516660 62 ntBASIC-2.66□□□□□ -2.84
TRAV38-1A0A0B4J264 RNU6-789P-201ENST00000517105 102 ntBASIC-2.66□□□□□ -2.84
TRAV38-1A0A0B4J264 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.67□□□□□ -2.84
TRAV38-1A0A0B4J264 MIR548N-201ENST00000408742 75 ntBASIC-2.67□□□□□ -2.84
TRAV38-1A0A0B4J264 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.68□□□□□ -2.84
TRAV38-1A0A0B4J264 SNORD60-201ENST00000383903 83 ntBASIC-2.68□□□□□ -2.84
TRAV38-1A0A0B4J264 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.68□□□□□ -2.84
TRAV38-1A0A0B4J264 AC097484.2-201ENST00000509147 251 ntBASIC-2.68□□□□□ -2.84
TRAV38-1A0A0B4J264 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.68□□□□□ -2.84
TRAV38-1A0A0B4J264 FTX_4.1-201ENST00000616291 147 ntBASIC-2.68□□□□□ -2.84
TRAV38-1A0A0B4J264 MIR202-201ENST00000362219 110 ntBASIC-2.69□□□□□ -2.84
TRAV38-1A0A0B4J264 RNU6-119P-201ENST00000364882 107 ntBASIC-2.69□□□□□ -2.84
TRAV38-1A0A0B4J264 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.69□□□□□ -2.84
TRAV38-1A0A0B4J264 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.69□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 282 ms