Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RNU6-669P-201ENST00000365575 107 ntBASIC-3.51□□□□□ -2.97
HLA-DRB4X5D2U9 RNU6-639P-201ENST00000384074 107 ntBASIC-3.51□□□□□ -2.97
HLA-DRB4X5D2U9 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.51□□□□□ -2.97
HLA-DRB4X5D2U9 MIR1236-201ENST00000408340 102 ntBASIC-3.51□□□□□ -2.97
HLA-DRB4X5D2U9 AL035470.1-201ENST00000622571 220 ntBASIC-3.51□□□□□ -2.97
HLA-DRB4X5D2U9 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.52□□□□□ -2.97
HLA-DRB4X5D2U9 RNU6-800P-201ENST00000384473 103 ntBASIC-3.52□□□□□ -2.97
HLA-DRB4X5D2U9 MIR4679-2-201ENST00000578358 77 ntBASIC-3.52□□□□□ -2.97
HLA-DRB4X5D2U9 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.53□□□□□ -2.97
HLA-DRB4X5D2U9 MIR3908-201ENST00000579798 126 ntBASIC-3.53□□□□□ -2.97
HLA-DRB4X5D2U9 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.54□□□□□ -2.98
HLA-DRB4X5D2U9 SNORD58A-201ENST00000383875 65 ntBASIC-3.54□□□□□ -2.98
HLA-DRB4X5D2U9 RNU6-68P-201ENST00000516576 104 ntBASIC-3.54□□□□□ -2.98
HLA-DRB4X5D2U9 RNU6-698P-201ENST00000363523 107 ntBASIC-3.55□□□□□ -2.98
HLA-DRB4X5D2U9 RNU6-34P-201ENST00000364874 107 ntBASIC-3.55□□□□□ -2.98
HLA-DRB4X5D2U9 RNU6-523P-201ENST00000516304 54 ntBASIC-3.55□□□□□ -2.98
HLA-DRB4X5D2U9 RNU6-795P-201ENST00000516323 103 ntBASIC-3.55□□□□□ -2.98
HLA-DRB4X5D2U9 MIR8062-201ENST00000621515 85 ntBASIC-3.55□□□□□ -2.98
HLA-DRB4X5D2U9 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.56□□□□□ -2.98
HLA-DRB4X5D2U9 SNORD60-201ENST00000383903 83 ntBASIC-3.56□□□□□ -2.98
HLA-DRB4X5D2U9 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.56□□□□□ -2.98
HLA-DRB4X5D2U9 RNU6-972P-201ENST00000391208 107 ntBASIC-3.57□□□□□ -2.98
HLA-DRB4X5D2U9 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.57□□□□□ -2.98
HLA-DRB4X5D2U9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.57□□□□□ -2.98
HLA-DRB4X5D2U9 AP001340.1-201ENST00000624405 217 ntBASIC-3.57□□□□□ -2.98
HLA-DRB4X5D2U9 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.58□□□□□ -2.98
HLA-DRB4X5D2U9 SNORD58C-201ENST00000365223 64 ntBASIC-3.58□□□□□ -2.98
HLA-DRB4X5D2U9 U4.4-201ENST00000620626 117 ntBASIC-3.58□□□□□ -2.98
HLA-DRB4X5D2U9 SNORD77.2-201ENST00000391045 68 ntBASIC-3.59□□□□□ -2.98
HLA-DRB4X5D2U9 MIR1254-1-201ENST00000408257 97 ntBASIC-3.59□□□□□ -2.98
HLA-DRB4X5D2U9 AL589823.1-201ENST00000429577 183 ntBASIC-3.59□□□□□ -2.98
HLA-DRB4X5D2U9 MIR202-201ENST00000362219 110 ntBASIC-3.6□□□□□ -2.99
HLA-DRB4X5D2U9 Y_RNA.11-201ENST00000362375 109 ntBASIC-3.6□□□□□ -2.99
HLA-DRB4X5D2U9 RNU6-974P-201ENST00000384099 108 ntBASIC-3.6□□□□□ -2.99
HLA-DRB4X5D2U9 RNU6-474P-201ENST00000384243 107 ntBASIC-3.6□□□□□ -2.99
HLA-DRB4X5D2U9 SNORD58.1-201ENST00000391313 66 ntBASIC-3.6□□□□□ -2.99
HLA-DRB4X5D2U9 Y_RNA.281-201ENST00000364774 94 ntBASIC-3.61□□□□□ -2.99
HLA-DRB4X5D2U9 RNU6-887P-201ENST00000410660 100 ntBASIC-3.61□□□□□ -2.99
HLA-DRB4X5D2U9 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.61□□□□□ -2.99
HLA-DRB4X5D2U9 MIR5009-201ENST00000578736 100 ntBASIC-3.61□□□□□ -2.99
HLA-DRB4X5D2U9 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.62□□□□□ -2.99
HLA-DRB4X5D2U9 MIR379-201ENST00000362218 67 ntBASIC-3.63□□□□□ -2.99
HLA-DRB4X5D2U9 RNU7-151P-201ENST00000516930 53 ntBASIC-3.63□□□□□ -2.99
HLA-DRB4X5D2U9 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.64□□□□□ -2.99
HLA-DRB4X5D2U9 SNORA33.2-201ENST00000365413 134 ntBASIC-3.64□□□□□ -2.99
HLA-DRB4X5D2U9 RNU6-649P-201ENST00000384463 107 ntBASIC-3.64□□□□□ -2.99
HLA-DRB4X5D2U9 MIR125B1-201ENST00000385236 88 ntBASIC-3.64□□□□□ -2.99
HLA-DRB4X5D2U9 RNU7-153P-201ENST00000516455 62 ntBASIC-3.64□□□□□ -2.99
HLA-DRB4X5D2U9 MIR548V-201ENST00000584165 80 ntBASIC-3.64□□□□□ -2.99
HLA-DRB4X5D2U9 U7.2-201ENST00000607576 63 ntBASIC-3.64□□□□□ -2.99
HLA-DRB4X5D2U9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.64□□□□□ -2.99
HLA-DRB4X5D2U9 SNORD116-10-201ENST00000363791 102 ntBASIC-3.65□□□□□ -2.99
HLA-DRB4X5D2U9 Y_RNA.431-201ENST00000384086 102 ntBASIC-3.65□□□□□ -2.99
HLA-DRB4X5D2U9 RNU6-985P-201ENST00000410182 104 ntBASIC-3.65□□□□□ -2.99
HLA-DRB4X5D2U9 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.65□□□□□ -2.99
HLA-DRB4X5D2U9 RNU6-1137P-201ENST00000517073 99 ntBASIC-3.65□□□□□ -2.99
HLA-DRB4X5D2U9 MIR4795-201ENST00000584182 89 ntBASIC-3.65□□□□□ -2.99
HLA-DRB4X5D2U9 MIR7978-201ENST00000636158 59 ntBASIC-3.65□□□□□ -2.99
HLA-DRB4X5D2U9 SNORD1B-201ENST00000363091 84 ntBASIC-3.66□□□□□ -3
HLA-DRB4X5D2U9 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.66□□□□□ -3
HLA-DRB4X5D2U9 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.66□□□□□ -3
HLA-DRB4X5D2U9 SNORD116-16-201ENST00000384533 92 ntBASIC-3.66□□□□□ -3
HLA-DRB4X5D2U9 SNORD115-37-201ENST00000363768 82 ntBASIC-3.67□□□□□ -3
HLA-DRB4X5D2U9 RNU6-520P-201ENST00000384717 104 ntBASIC-3.67□□□□□ -3
HLA-DRB4X5D2U9 SNORA17.4-201ENST00000391287 132 ntBASIC-3.67□□□□□ -3
HLA-DRB4X5D2U9 RNU6-1135P-201ENST00000411083 103 ntBASIC-3.67□□□□□ -3
HLA-DRB4X5D2U9 RNU4-71P-201ENST00000516258 113 ntBASIC-3.67□□□□□ -3
HLA-DRB4X5D2U9 RNU6-537P-201ENST00000517277 103 ntBASIC-3.67□□□□□ -3
HLA-DRB4X5D2U9 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.68□□□□□ -3
HLA-DRB4X5D2U9 RNU6-635P-201ENST00000516651 102 ntBASIC-3.68□□□□□ -3
HLA-DRB4X5D2U9 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.69□□□□□ -3
HLA-DRB4X5D2U9 SNORA81.3-201ENST00000517283 198 ntBASIC-3.69□□□□□ -3
HLA-DRB4X5D2U9 AC022559.1-201ENST00000520905 205 ntBASIC-3.69□□□□□ -3
HLA-DRB4X5D2U9 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.69□□□□□ -3
HLA-DRB4X5D2U9 Y_RNA.604-201ENST00000410574 102 ntBASIC-3.7□□□□□ -3
HLA-DRB4X5D2U9 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.7□□□□□ -3
HLA-DRB4X5D2U9 RNU6-875P-201ENST00000516488 106 ntBASIC-3.7□□□□□ -3
HLA-DRB4X5D2U9 Y_RNA.20-201ENST00000362479 113 ntBASIC-3.71□□□□□ -3
HLA-DRB4X5D2U9 RNU6-668P-201ENST00000364180 107 ntBASIC-3.71□□□□□ -3
HLA-DRB4X5D2U9 MIR579-201ENST00000385221 98 ntBASIC-3.71□□□□□ -3
HLA-DRB4X5D2U9 RNU6-361P-201ENST00000364454 107 ntBASIC-3.72□□□□□ -3
HLA-DRB4X5D2U9 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.72□□□□□ -3
HLA-DRB4X5D2U9 RNU6-345P-201ENST00000517001 107 ntBASIC-3.72□□□□□ -3
HLA-DRB4X5D2U9 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.73□□□□□ -3.01
HLA-DRB4X5D2U9 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.73□□□□□ -3.01
HLA-DRB4X5D2U9 RNU6-867P-201ENST00000364956 107 ntBASIC-3.73□□□□□ -3.01
HLA-DRB4X5D2U9 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.73□□□□□ -3.01
HLA-DRB4X5D2U9 SNORD113-2-201ENST00000391082 72 ntBASIC-3.73□□□□□ -3.01
HLA-DRB4X5D2U9 RNU6-982P-201ENST00000516216 102 ntBASIC-3.73□□□□□ -3.01
HLA-DRB4X5D2U9 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.73□□□□□ -3.01
HLA-DRB4X5D2U9 MIR3675-201ENST00000583661 73 ntBASIC-3.73□□□□□ -3.01
HLA-DRB4X5D2U9 MIR630-201ENST00000384957 97 ntBASIC-3.74□□□□□ -3.01
HLA-DRB4X5D2U9 RNU6-604P-201ENST00000390917 100 ntBASIC-3.74□□□□□ -3.01
HLA-DRB4X5D2U9 AC141273.2-201ENST00000618989 130 ntBASIC-3.74□□□□□ -3.01
HLA-DRB4X5D2U9 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.75□□□□□ -3.01
HLA-DRB4X5D2U9 U6atac.1-201ENST00000616025 117 ntBASIC-3.75□□□□□ -3.01
HLA-DRB4X5D2U9 SCARNA23-201ENST00000516060 130 ntBASIC-3.76□□□□□ -3.01
HLA-DRB4X5D2U9 RNU6-737P-201ENST00000365370 107 ntBASIC-3.77□□□□□ -3.01
HLA-DRB4X5D2U9 AC026407.1-201ENST00000518369 204 ntBASIC-3.77□□□□□ -3.01
HLA-DRB4X5D2U9 AC072026.1-201ENST00000605023 201 ntBASIC-3.77□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 238.5 ms