Protein–RNA interactions for Protein: Q9Y5I3

PCDHA1, Protocadherin alpha-1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1Q9Y5I3 RNU6-411P-201ENST00000384451 107 ntBASIC-0.45□□□□□ -2.48
PCDHA1Q9Y5I3 RNU6-35P-201ENST00000384530 107 ntBASIC-0.45□□□□□ -2.48
PCDHA1Q9Y5I3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.45□□□□□ -2.48
PCDHA1Q9Y5I3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.45□□□□□ -2.48
PCDHA1Q9Y5I3 AL445193.1-201ENST00000441183 141 ntBASIC-0.45□□□□□ -2.48
PCDHA1Q9Y5I3 MIR4636-201ENST00000582271 80 ntBASIC-0.45□□□□□ -2.48
PCDHA1Q9Y5I3 MIR6854-201ENST00000614935 69 ntBASIC-0.45□□□□□ -2.48
PCDHA1Q9Y5I3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.45□□□□□ -2.48
PCDHA1Q9Y5I3 SNORD45A-201ENST00000384512 84 ntBASIC-0.46□□□□□ -2.48
PCDHA1Q9Y5I3 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.46□□□□□ -2.48
PCDHA1Q9Y5I3 MIR154-201ENST00000385243 84 ntBASIC-0.46□□□□□ -2.48
PCDHA1Q9Y5I3 SNORD75.1-201ENST00000408373 60 ntBASIC-0.46□□□□□ -2.48
PCDHA1Q9Y5I3 RNU6-687P-201ENST00000516443 89 ntBASIC-0.46□□□□□ -2.48
PCDHA1Q9Y5I3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.46□□□□□ -2.48
PCDHA1Q9Y5I3 MIR519A2-201ENST00000384990 87 ntBASIC-0.47□□□□□ -2.48
PCDHA1Q9Y5I3 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.47□□□□□ -2.48
PCDHA1Q9Y5I3 MIR5704-201ENST00000584029 77 ntBASIC-0.47□□□□□ -2.48
PCDHA1Q9Y5I3 AC114755.3-201ENST00000481111 251 ntBASIC-0.48□□□□□ -2.49
PCDHA1Q9Y5I3 RNU6-518P-201ENST00000516056 96 ntBASIC-0.48□□□□□ -2.49
PCDHA1Q9Y5I3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.48□□□□□ -2.49
PCDHA1Q9Y5I3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.49□□□□□ -2.49
PCDHA1Q9Y5I3 RNA5SP225-201ENST00000410874 135 ntBASIC-0.5□□□□□ -2.49
PCDHA1Q9Y5I3 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.51□□□□□ -2.49
PCDHA1Q9Y5I3 RNU6-668P-201ENST00000364180 107 ntBASIC-0.51□□□□□ -2.49
PCDHA1Q9Y5I3 SNORA13-201ENST00000458790 133 ntBASIC-0.51□□□□□ -2.49
PCDHA1Q9Y5I3 AP001180.6-201ENST00000584918 159 ntBASIC-0.51□□□□□ -2.49
PCDHA1Q9Y5I3 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.52□□□□□ -2.49
PCDHA1Q9Y5I3 SNORD38.3-201ENST00000516599 73 ntBASIC-0.52□□□□□ -2.49
PCDHA1Q9Y5I3 RNA5SP169-201ENST00000517268 117 ntBASIC-0.52□□□□□ -2.49
PCDHA1Q9Y5I3 MIR3681-201ENST00000580089 72 ntBASIC-0.52□□□□□ -2.49
PCDHA1Q9Y5I3 MIR8068-201ENST00000618032 68 ntBASIC-0.52□□□□□ -2.49
PCDHA1Q9Y5I3 RNA5SP215-201ENST00000363440 122 ntBASIC-0.53□□□□□ -2.49
PCDHA1Q9Y5I3 SNORD74.6-201ENST00000364796 70 ntBASIC-0.53□□□□□ -2.49
PCDHA1Q9Y5I3 RNU6-895P-201ENST00000384125 103 ntBASIC-0.53□□□□□ -2.49
PCDHA1Q9Y5I3 MIR548C-201ENST00000384815 97 ntBASIC-0.53□□□□□ -2.49
PCDHA1Q9Y5I3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.53□□□□□ -2.49
PCDHA1Q9Y5I3 RNU7-174P-201ENST00000516248 59 ntBASIC-0.53□□□□□ -2.49
PCDHA1Q9Y5I3 SNORD115-31-201ENST00000365318 82 ntBASIC-0.54□□□□□ -2.5
PCDHA1Q9Y5I3 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.54□□□□□ -2.5
PCDHA1Q9Y5I3 MIR4464-201ENST00000580818 92 ntBASIC-0.54□□□□□ -2.5
PCDHA1Q9Y5I3 MIR517B-201ENST00000385102 67 ntBASIC-0.55□□□□□ -2.5
PCDHA1Q9Y5I3 MIR518B-201ENST00000385127 83 ntBASIC-0.55□□□□□ -2.5
PCDHA1Q9Y5I3 MIR204-201ENST00000385200 110 ntBASIC-0.55□□□□□ -2.5
PCDHA1Q9Y5I3 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.55□□□□□ -2.5
PCDHA1Q9Y5I3 MIR101-1-201ENST00000362265 75 ntBASIC-0.56□□□□□ -2.5
PCDHA1Q9Y5I3 RNU6-634P-201ENST00000459134 106 ntBASIC-0.56□□□□□ -2.5
PCDHA1Q9Y5I3 MIR4493-201ENST00000584016 73 ntBASIC-0.56□□□□□ -2.5
PCDHA1Q9Y5I3 SNORD116-24-201ENST00000384549 92 ntBASIC-0.57□□□□□ -2.5
PCDHA1Q9Y5I3 RNU6-523P-201ENST00000516304 54 ntBASIC-0.57□□□□□ -2.5
PCDHA1Q9Y5I3 AL445584.3-201ENST00000617173 78 ntBASIC-0.57□□□□□ -2.5
PCDHA1Q9Y5I3 MIR6888-201ENST00000621977 67 ntBASIC-0.57□□□□□ -2.5
PCDHA1Q9Y5I3 RNU6-698P-201ENST00000363523 107 ntBASIC-0.58□□□□□ -2.5
PCDHA1Q9Y5I3 RNU6-34P-201ENST00000364874 107 ntBASIC-0.58□□□□□ -2.5
PCDHA1Q9Y5I3 MIR4662A-201ENST00000637499 67 ntBASIC-0.58□□□□□ -2.5
PCDHA1Q9Y5I3 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.6□□□□□ -2.51
PCDHA1Q9Y5I3 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.61□□□□□ -2.51
PCDHA1Q9Y5I3 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.61□□□□□ -2.51
PCDHA1Q9Y5I3 MIR604-201ENST00000384880 94 ntBASIC-0.61□□□□□ -2.51
PCDHA1Q9Y5I3 MIR224-201ENST00000384889 81 ntBASIC-0.61□□□□□ -2.51
PCDHA1Q9Y5I3 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.61□□□□□ -2.51
PCDHA1Q9Y5I3 AC108676.2-201ENST00000605225 163 ntBASIC-0.61□□□□□ -2.51
PCDHA1Q9Y5I3 SNORD114-14-201ENST00000362723 75 ntBASIC-0.62□□□□□ -2.51
PCDHA1Q9Y5I3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
PCDHA1Q9Y5I3 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.63□□□□□ -2.51
PCDHA1Q9Y5I3 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.63□□□□□ -2.51
PCDHA1Q9Y5I3 MIR1265-201ENST00000408444 86 ntBASIC-0.63□□□□□ -2.51
PCDHA1Q9Y5I3 RNU6-871P-201ENST00000516122 100 ntBASIC-0.63□□□□□ -2.51
PCDHA1Q9Y5I3 SNORD22.1-201ENST00000516331 125 ntBASIC-0.63□□□□□ -2.51
PCDHA1Q9Y5I3 RNU6-924P-201ENST00000362926 108 ntBASIC-0.64□□□□□ -2.51
PCDHA1Q9Y5I3 RNU6-776P-201ENST00000364403 104 ntBASIC-0.64□□□□□ -2.51
PCDHA1Q9Y5I3 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.64□□□□□ -2.51
PCDHA1Q9Y5I3 AC021146.6-201ENST00000514659 117 ntBASIC-0.64□□□□□ -2.51
PCDHA1Q9Y5I3 MIR548V-201ENST00000584165 80 ntBASIC-0.64□□□□□ -2.51
PCDHA1Q9Y5I3 RNU6-540P-201ENST00000384622 101 ntBASIC-0.65□□□□□ -2.51
PCDHA1Q9Y5I3 MIR124-2-201ENST00000385081 109 ntBASIC-0.65□□□□□ -2.51
PCDHA1Q9Y5I3 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.65□□□□□ -2.51
PCDHA1Q9Y5I3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.65□□□□□ -2.51
PCDHA1Q9Y5I3 Z95118.1-201ENST00000421372 247 ntBASIC-0.65□□□□□ -2.51
PCDHA1Q9Y5I3 RNU6-758P-201ENST00000516292 89 ntBASIC-0.65□□□□□ -2.51
PCDHA1Q9Y5I3 MIR3179-1-201ENST00000578940 84 ntBASIC-0.65□□□□□ -2.51
PCDHA1Q9Y5I3 MIR3179-2-201ENST00000579107 84 ntBASIC-0.65□□□□□ -2.51
PCDHA1Q9Y5I3 MIR3179-3-201ENST00000579566 84 ntBASIC-0.65□□□□□ -2.51
PCDHA1Q9Y5I3 MIR3179-4-201ENST00000617599 84 ntBASIC-0.65□□□□□ -2.51
PCDHA1Q9Y5I3 SNORA3B-201ENST00000391305 131 ntBASIC-0.66□□□□□ -2.52
PCDHA1Q9Y5I3 AL500527.2-201ENST00000454105 95 ntBASIC-0.66□□□□□ -2.52
PCDHA1Q9Y5I3 MIR548AG1-201ENST00000579932 66 ntBASIC-0.66□□□□□ -2.52
PCDHA1Q9Y5I3 U4.4-201ENST00000620626 117 ntBASIC-0.66□□□□□ -2.52
PCDHA1Q9Y5I3 MIR6086-201ENST00000638065 55 ntBASIC-0.66□□□□□ -2.52
PCDHA1Q9Y5I3 MIR889-201ENST00000401280 79 ntBASIC-0.67□□□□□ -2.52
PCDHA1Q9Y5I3 RNA5SP476-201ENST00000516613 103 ntBASIC-0.67□□□□□ -2.52
PCDHA1Q9Y5I3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.68□□□□□ -2.52
PCDHA1Q9Y5I3 SNORD113-2-201ENST00000391082 72 ntBASIC-0.68□□□□□ -2.52
PCDHA1Q9Y5I3 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.69□□□□□ -2.52
PCDHA1Q9Y5I3 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.69□□□□□ -2.52
PCDHA1Q9Y5I3 MIR630-201ENST00000384957 97 ntBASIC-0.69□□□□□ -2.52
PCDHA1Q9Y5I3 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.69□□□□□ -2.52
PCDHA1Q9Y5I3 RNU6-663P-201ENST00000391105 106 ntBASIC-0.69□□□□□ -2.52
PCDHA1Q9Y5I3 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.69□□□□□ -2.52
PCDHA1Q9Y5I3 SCARNA17-201ENST00000516183 144 ntBASIC-0.69□□□□□ -2.52
PCDHA1Q9Y5I3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms