Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AL627230.5-201ENST00000619807 58 ntBASIC0.16□□□□□ -2.38
LRIT1Q9P2V4 Y_RNA.185-201ENST00000363894 100 ntBASIC0.15□□□□□ -2.39
LRIT1Q9P2V4 AL021921.1-201ENST00000442774 93 ntBASIC0.15□□□□□ -2.39
LRIT1Q9P2V4 RNU7-165P-201ENST00000458864 60 ntBASIC0.15□□□□□ -2.39
LRIT1Q9P2V4 AC125388.1-201ENST00000459631 156 ntBASIC0.15□□□□□ -2.39
LRIT1Q9P2V4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.15□□□□□ -2.39
LRIT1Q9P2V4 MIR148A-201ENST00000362215 68 ntBASIC0.14□□□□□ -2.39
LRIT1Q9P2V4 Y_RNA.246-201ENST00000364495 108 ntBASIC0.14□□□□□ -2.39
LRIT1Q9P2V4 AC110620.1-201ENST00000416042 228 ntBASIC0.14□□□□□ -2.39
LRIT1Q9P2V4 AC244250.2-201ENST00000418731 148 ntBASIC0.14□□□□□ -2.39
LRIT1Q9P2V4 uc_338.36-201ENST00000622331 158 ntBASIC0.14□□□□□ -2.39
LRIT1Q9P2V4 RNA5SP192-201ENST00000364404 120 ntBASIC0.13□□□□□ -2.39
LRIT1Q9P2V4 SNORD113-2-201ENST00000391082 72 ntBASIC0.13□□□□□ -2.39
LRIT1Q9P2V4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.13□□□□□ -2.39
LRIT1Q9P2V4 snoU13.19-201ENST00000459148 104 ntBASIC0.13□□□□□ -2.39
LRIT1Q9P2V4 RNU7-55P-201ENST00000459426 62 ntBASIC0.13□□□□□ -2.39
LRIT1Q9P2V4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.13□□□□□ -2.39
LRIT1Q9P2V4 MIR4768-201ENST00000585270 74 ntBASIC0.13□□□□□ -2.39
LRIT1Q9P2V4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.13□□□□□ -2.39
LRIT1Q9P2V4 RNU6-455P-201ENST00000384681 107 ntBASIC0.12□□□□□ -2.39
LRIT1Q9P2V4 MIR892B-201ENST00000401279 77 ntBASIC0.12□□□□□ -2.39
LRIT1Q9P2V4 MIR4743-201ENST00000584576 69 ntBASIC0.12□□□□□ -2.39
LRIT1Q9P2V4 AL353803.5-201ENST00000599815 141 ntBASIC0.12□□□□□ -2.39
LRIT1Q9P2V4 MIR655-201ENST00000362159 97 ntBASIC0.11□□□□□ -2.39
LRIT1Q9P2V4 SNORA25.5-201ENST00000363782 126 ntBASIC0.11□□□□□ -2.39
LRIT1Q9P2V4 RNU6-302P-201ENST00000365249 107 ntBASIC0.11□□□□□ -2.39
LRIT1Q9P2V4 RNU6-929P-201ENST00000384429 107 ntBASIC0.11□□□□□ -2.39
LRIT1Q9P2V4 SNORA41B-201ENST00000384785 128 ntBASIC0.11□□□□□ -2.39
LRIT1Q9P2V4 RNU7-159P-201ENST00000459284 62 ntBASIC0.11□□□□□ -2.39
LRIT1Q9P2V4 RNU7-154P-201ENST00000516194 62 ntBASIC0.11□□□□□ -2.39
LRIT1Q9P2V4 MIR371B-201ENST00000638082 66 ntBASIC0.11□□□□□ -2.39
LRIT1Q9P2V4 RNU6-92P-201ENST00000605893 104 ntBASIC0.1□□□□□ -2.39
LRIT1Q9P2V4 RNU6-900P-201ENST00000384498 102 ntBASIC0.09□□□□□ -2.4
LRIT1Q9P2V4 RNU6-30P-201ENST00000384561 107 ntBASIC0.09□□□□□ -2.4
LRIT1Q9P2V4 RNA5SP470-201ENST00000516463 106 ntBASIC0.09□□□□□ -2.4
LRIT1Q9P2V4 AL391099.1-201ENST00000624635 187 ntBASIC0.09□□□□□ -2.4
LRIT1Q9P2V4 Y_RNA.74-201ENST00000362911 99 ntBASIC0.08□□□□□ -2.4
LRIT1Q9P2V4 Y_RNA.282-201ENST00000364793 102 ntBASIC0.08□□□□□ -2.4
LRIT1Q9P2V4 Y_RNA.698-201ENST00000516798 118 ntBASIC0.08□□□□□ -2.4
LRIT1Q9P2V4 MIR4464-201ENST00000580818 92 ntBASIC0.08□□□□□ -2.4
LRIT1Q9P2V4 MIR4432-201ENST00000581823 84 ntBASIC0.08□□□□□ -2.4
LRIT1Q9P2V4 MIR5704-201ENST00000584029 77 ntBASIC0.08□□□□□ -2.4
LRIT1Q9P2V4 SNORD60.1-201ENST00000362451 73 ntBASIC0.07□□□□□ -2.4
LRIT1Q9P2V4 RNU6-669P-201ENST00000365575 107 ntBASIC0.07□□□□□ -2.4
LRIT1Q9P2V4 SNORD56B-201ENST00000384713 71 ntBASIC0.07□□□□□ -2.4
LRIT1Q9P2V4 Z95118.1-201ENST00000421372 247 ntBASIC0.07□□□□□ -2.4
LRIT1Q9P2V4 MIR8068-201ENST00000618032 68 ntBASIC0.07□□□□□ -2.4
LRIT1Q9P2V4 RNU6-973P-201ENST00000364690 107 ntBASIC0.06□□□□□ -2.4
LRIT1Q9P2V4 SNORD114-31-201ENST00000363219 75 ntBASIC0.05□□□□□ -2.4
LRIT1Q9P2V4 AC096531.1-201ENST00000419107 107 ntBASIC0.05□□□□□ -2.4
LRIT1Q9P2V4 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
LRIT1Q9P2V4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.05□□□□□ -2.4
LRIT1Q9P2V4 MIR6888-201ENST00000621977 67 ntBASIC0.05□□□□□ -2.4
LRIT1Q9P2V4 snoR1.1-201ENST00000628177 80 ntBASIC0.05□□□□□ -2.4
LRIT1Q9P2V4 RNA5SP25-201ENST00000410815 110 ntBASIC0.04□□□□□ -2.4
LRIT1Q9P2V4 RNU6-758P-201ENST00000516292 89 ntBASIC0.04□□□□□ -2.4
LRIT1Q9P2V4 IGLVI-20-201ENST00000519296 130 ntBASIC0.04□□□□□ -2.4
LRIT1Q9P2V4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.04□□□□□ -2.4
LRIT1Q9P2V4 RNA5SP368-201ENST00000364298 116 ntBASIC0.03□□□□□ -2.4
LRIT1Q9P2V4 RNU6-1133P-201ENST00000410963 100 ntBASIC0.03□□□□□ -2.4
LRIT1Q9P2V4 RNU6-122P-201ENST00000516818 107 ntBASIC0.03□□□□□ -2.4
LRIT1Q9P2V4 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
LRIT1Q9P2V4 RNU6-246P-201ENST00000384702 107 ntBASIC0.02□□□□□ -2.41
LRIT1Q9P2V4 MIR527-201ENST00000385244 85 ntBASIC0.02□□□□□ -2.41
LRIT1Q9P2V4 MIR466-201ENST00000580653 84 ntBASIC0.02□□□□□ -2.41
LRIT1Q9P2V4 AL445584.3-201ENST00000617173 78 ntBASIC0.01□□□□□ -2.41
LRIT1Q9P2V4 Y_RNA.109-201ENST00000363215 102 ntBASIC0□□□□□ -2.41
LRIT1Q9P2V4 SNORD49B-201ENST00000365172 72 ntBASIC0□□□□□ -2.41
LRIT1Q9P2V4 SNORD116-16-201ENST00000384533 92 ntBASIC0□□□□□ -2.41
LRIT1Q9P2V4 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
LRIT1Q9P2V4 RNU6-940P-201ENST00000363433 104 ntBASIC-0.01□□□□□ -2.41
LRIT1Q9P2V4 AC114755.3-201ENST00000481111 251 ntBASIC-0.01□□□□□ -2.41
LRIT1Q9P2V4 MIR4280-201ENST00000582178 76 ntBASIC-0.01□□□□□ -2.41
LRIT1Q9P2V4 AP001180.6-201ENST00000584918 159 ntBASIC-0.01□□□□□ -2.41
LRIT1Q9P2V4 AC108676.2-201ENST00000605225 163 ntBASIC-0.01□□□□□ -2.41
LRIT1Q9P2V4 RNU6-46P-201ENST00000383860 107 ntBASIC-0.02□□□□□ -2.41
LRIT1Q9P2V4 RNU6-458P-201ENST00000384179 107 ntBASIC-0.02□□□□□ -2.41
LRIT1Q9P2V4 MIR633-201ENST00000384821 98 ntBASIC-0.02□□□□□ -2.41
LRIT1Q9P2V4 MIR4493-201ENST00000584016 73 ntBASIC-0.02□□□□□ -2.41
LRIT1Q9P2V4 U6.58-201ENST00000613107 107 ntBASIC-0.02□□□□□ -2.41
LRIT1Q9P2V4 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.03□□□□□ -2.41
LRIT1Q9P2V4 SNORD114-15-201ENST00000364687 72 ntBASIC-0.03□□□□□ -2.41
LRIT1Q9P2V4 RNU6-901P-201ENST00000384593 106 ntBASIC-0.03□□□□□ -2.41
LRIT1Q9P2V4 AL445193.1-201ENST00000441183 141 ntBASIC-0.03□□□□□ -2.41
LRIT1Q9P2V4 AL590491.3-201ENST00000610731 82 ntBASIC-0.03□□□□□ -2.41
LRIT1Q9P2V4 MIR6854-201ENST00000614935 69 ntBASIC-0.04□□□□□ -2.42
LRIT1Q9P2V4 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.05□□□□□ -2.42
LRIT1Q9P2V4 MIR604-201ENST00000384880 94 ntBASIC-0.05□□□□□ -2.42
LRIT1Q9P2V4 RNU6-446P-201ENST00000362827 106 ntBASIC-0.06□□□□□ -2.42
LRIT1Q9P2V4 SNORD1B-201ENST00000363091 84 ntBASIC-0.06□□□□□ -2.42
LRIT1Q9P2V4 SNORA62.4-201ENST00000365504 151 ntBASIC-0.06□□□□□ -2.42
LRIT1Q9P2V4 MIR3938-201ENST00000582157 103 ntBASIC-0.06□□□□□ -2.42
LRIT1Q9P2V4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
LRIT1Q9P2V4 SNORD38.3-201ENST00000516599 73 ntBASIC-0.07□□□□□ -2.42
LRIT1Q9P2V4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.08□□□□□ -2.42
LRIT1Q9P2V4 RNU6-598P-201ENST00000364017 105 ntBASIC-0.08□□□□□ -2.42
LRIT1Q9P2V4 SNORD114-12-201ENST00000365400 75 ntBASIC-0.08□□□□□ -2.42
LRIT1Q9P2V4 MIR214-201ENST00000385214 110 ntBASIC-0.08□□□□□ -2.42
LRIT1Q9P2V4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
LRIT1Q9P2V4 RNU6-829P-201ENST00000363700 112 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms