Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC072026.1-201ENST00000605023 201 ntBASIC-2.64□□□□□ -2.83
UPF3BQ9BZI7 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.64□□□□□ -2.83
UPF3BQ9BZI7 MIR513C-201ENST00000401352 84 ntBASIC-2.65□□□□□ -2.83
UPF3BQ9BZI7 MIR548F4-201ENST00000408515 105 ntBASIC-2.65□□□□□ -2.83
UPF3BQ9BZI7 U7.2-201ENST00000607576 63 ntBASIC-2.65□□□□□ -2.83
UPF3BQ9BZI7 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.66□□□□□ -2.84
UPF3BQ9BZI7 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.66□□□□□ -2.84
UPF3BQ9BZI7 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.66□□□□□ -2.84
UPF3BQ9BZI7 MIR4796-201ENST00000580742 81 ntBASIC-2.66□□□□□ -2.84
UPF3BQ9BZI7 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.66□□□□□ -2.84
UPF3BQ9BZI7 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.67□□□□□ -2.84
UPF3BQ9BZI7 MIR548AA1-201ENST00000384971 97 ntBASIC-2.67□□□□□ -2.84
UPF3BQ9BZI7 SNORD18C-201ENST00000362704 69 ntBASIC-2.68□□□□□ -2.84
UPF3BQ9BZI7 RNU6-106P-201ENST00000384405 107 ntBASIC-2.68□□□□□ -2.84
UPF3BQ9BZI7 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.68□□□□□ -2.84
UPF3BQ9BZI7 RNU6-111P-201ENST00000517179 105 ntBASIC-2.68□□□□□ -2.84
UPF3BQ9BZI7 MIR548S-201ENST00000581352 82 ntBASIC-2.68□□□□□ -2.84
UPF3BQ9BZI7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.68□□□□□ -2.84
UPF3BQ9BZI7 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.69□□□□□ -2.84
UPF3BQ9BZI7 SNORD1B-201ENST00000363091 84 ntBASIC-2.69□□□□□ -2.84
UPF3BQ9BZI7 SNORA27.2-201ENST00000363365 126 ntBASIC-2.69□□□□□ -2.84
UPF3BQ9BZI7 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.69□□□□□ -2.84
UPF3BQ9BZI7 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.69□□□□□ -2.84
UPF3BQ9BZI7 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.69□□□□□ -2.84
UPF3BQ9BZI7 RNU6-340P-201ENST00000364005 107 ntBASIC-2.7□□□□□ -2.84
UPF3BQ9BZI7 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.7□□□□□ -2.84
UPF3BQ9BZI7 RNU7-151P-201ENST00000516930 53 ntBASIC-2.7□□□□□ -2.84
UPF3BQ9BZI7 Y_RNA.720-201ENST00000517166 92 ntBASIC-2.7□□□□□ -2.84
UPF3BQ9BZI7 MIR3128-201ENST00000581957 66 ntBASIC-2.7□□□□□ -2.84
UPF3BQ9BZI7 MIR202-201ENST00000362219 110 ntBASIC-2.71□□□□□ -2.84
UPF3BQ9BZI7 RNU6-912P-201ENST00000363800 104 ntBASIC-2.71□□□□□ -2.84
UPF3BQ9BZI7 SNORD58A-201ENST00000383875 65 ntBASIC-2.71□□□□□ -2.84
UPF3BQ9BZI7 MIR5009-201ENST00000578736 100 ntBASIC-2.71□□□□□ -2.84
UPF3BQ9BZI7 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.72□□□□□ -2.84
UPF3BQ9BZI7 RNU6-803P-201ENST00000516034 102 ntBASIC-2.72□□□□□ -2.84
UPF3BQ9BZI7 MIR548V-201ENST00000584165 80 ntBASIC-2.72□□□□□ -2.84
UPF3BQ9BZI7 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.73□□□□□ -2.85
UPF3BQ9BZI7 AL450471.1-201ENST00000447509 127 ntBASIC-2.73□□□□□ -2.85
UPF3BQ9BZI7 RNU6-795P-201ENST00000516323 103 ntBASIC-2.73□□□□□ -2.85
UPF3BQ9BZI7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.73□□□□□ -2.85
UPF3BQ9BZI7 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.73□□□□□ -2.85
UPF3BQ9BZI7 RNU6-530P-201ENST00000391180 107 ntBASIC-2.74□□□□□ -2.85
UPF3BQ9BZI7 RNU6-1023P-201ENST00000516137 106 ntBASIC-2.74□□□□□ -2.85
UPF3BQ9BZI7 RNU6-982P-201ENST00000516216 102 ntBASIC-2.74□□□□□ -2.85
UPF3BQ9BZI7 RNU6-523P-201ENST00000516304 54 ntBASIC-2.74□□□□□ -2.85
UPF3BQ9BZI7 MIR3144-201ENST00000579460 79 ntBASIC-2.74□□□□□ -2.85
UPF3BQ9BZI7 MIR7978-201ENST00000636158 59 ntBASIC-2.74□□□□□ -2.85
UPF3BQ9BZI7 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.75□□□□□ -2.85
UPF3BQ9BZI7 RNU6-681P-201ENST00000364012 104 ntBASIC-2.75□□□□□ -2.85
UPF3BQ9BZI7 SNORA41B-201ENST00000384785 128 ntBASIC-2.75□□□□□ -2.85
UPF3BQ9BZI7 MIR630-201ENST00000384957 97 ntBASIC-2.75□□□□□ -2.85
UPF3BQ9BZI7 SNORD113-2-201ENST00000391082 72 ntBASIC-2.75□□□□□ -2.85
UPF3BQ9BZI7 RNU6-972P-201ENST00000391208 107 ntBASIC-2.75□□□□□ -2.85
UPF3BQ9BZI7 MIR1254-1-201ENST00000408257 97 ntBASIC-2.75□□□□□ -2.85
UPF3BQ9BZI7 MTCYBP6-201ENST00000441810 138 ntBASIC-2.75□□□□□ -2.85
UPF3BQ9BZI7 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.75□□□□□ -2.85
UPF3BQ9BZI7 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.75□□□□□ -2.85
UPF3BQ9BZI7 MIR429-201ENST00000362106 83 ntBASIC-2.76□□□□□ -2.85
UPF3BQ9BZI7 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.76□□□□□ -2.85
UPF3BQ9BZI7 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.76□□□□□ -2.85
UPF3BQ9BZI7 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.76□□□□□ -2.85
UPF3BQ9BZI7 MIR548X2-201ENST00000579776 100 ntBASIC-2.76□□□□□ -2.85
UPF3BQ9BZI7 RNU6-828P-201ENST00000364876 107 ntBASIC-2.77□□□□□ -2.85
UPF3BQ9BZI7 RNU6-649P-201ENST00000384463 107 ntBASIC-2.77□□□□□ -2.85
UPF3BQ9BZI7 MIR1236-201ENST00000408340 102 ntBASIC-2.77□□□□□ -2.85
UPF3BQ9BZI7 RNY4P25-201ENST00000459254 96 ntBASIC-2.77□□□□□ -2.85
UPF3BQ9BZI7 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.77□□□□□ -2.85
UPF3BQ9BZI7 RNY1P1-201ENST00000364372 112 ntBASIC-2.78□□□□□ -2.85
UPF3BQ9BZI7 AL117187.1-201ENST00000555482 181 ntBASIC-2.78□□□□□ -2.85
UPF3BQ9BZI7 SNORA20.1-201ENST00000364790 130 ntBASIC-2.79□□□□□ -2.86
UPF3BQ9BZI7 Y_RNA.580-201ENST00000391004 95 ntBASIC-2.79□□□□□ -2.86
UPF3BQ9BZI7 RNU6-887P-201ENST00000410660 100 ntBASIC-2.79□□□□□ -2.86
UPF3BQ9BZI7 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.8□□□□□ -2.86
UPF3BQ9BZI7 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.8□□□□□ -2.86
UPF3BQ9BZI7 RNU6-698P-201ENST00000363523 107 ntBASIC-2.8□□□□□ -2.86
UPF3BQ9BZI7 RNU6-34P-201ENST00000364874 107 ntBASIC-2.8□□□□□ -2.86
UPF3BQ9BZI7 SNORD116-16-201ENST00000384533 92 ntBASIC-2.8□□□□□ -2.86
UPF3BQ9BZI7 Y_RNA.535-201ENST00000384612 99 ntBASIC-2.8□□□□□ -2.86
UPF3BQ9BZI7 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.8□□□□□ -2.86
UPF3BQ9BZI7 RNU6-68P-201ENST00000516576 104 ntBASIC-2.8□□□□□ -2.86
UPF3BQ9BZI7 MIR548N-201ENST00000408742 75 ntBASIC-2.81□□□□□ -2.86
UPF3BQ9BZI7 RNU7-153P-201ENST00000516455 62 ntBASIC-2.81□□□□□ -2.86
UPF3BQ9BZI7 Y_RNA.149-201ENST00000363558 117 ntBASIC-2.82□□□□□ -2.86
UPF3BQ9BZI7 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.82□□□□□ -2.86
UPF3BQ9BZI7 MIR125B1-201ENST00000385236 88 ntBASIC-2.82□□□□□ -2.86
UPF3BQ9BZI7 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.82□□□□□ -2.86
UPF3BQ9BZI7 RNU6-330P-201ENST00000363015 107 ntBASIC-2.83□□□□□ -2.86
UPF3BQ9BZI7 Y_RNA.422-201ENST00000384054 114 ntBASIC-2.83□□□□□ -2.86
UPF3BQ9BZI7 RNU6-800P-201ENST00000384473 103 ntBASIC-2.83□□□□□ -2.86
UPF3BQ9BZI7 RNU6-520P-201ENST00000384717 104 ntBASIC-2.83□□□□□ -2.86
UPF3BQ9BZI7 SNORD77.2-201ENST00000391045 68 ntBASIC-2.83□□□□□ -2.86
UPF3BQ9BZI7 RNU6-772P-201ENST00000516042 105 ntBASIC-2.83□□□□□ -2.86
UPF3BQ9BZI7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.83□□□□□ -2.86
UPF3BQ9BZI7 SNORD116-10-201ENST00000363791 102 ntBASIC-2.84□□□□□ -2.86
UPF3BQ9BZI7 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.84□□□□□ -2.86
UPF3BQ9BZI7 RNU6-172P-201ENST00000411000 93 ntBASIC-2.84□□□□□ -2.86
UPF3BQ9BZI7 AL731768.1-201ENST00000603124 139 ntBASIC-2.84□□□□□ -2.86
UPF3BQ9BZI7 AL157777.2-201ENST00000258070 137 ntBASIC-2.85□□□□□ -2.87
UPF3BQ9BZI7 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.85□□□□□ -2.87
UPF3BQ9BZI7 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.85□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms