Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU6-455P-201ENST00000384681 107 ntBASIC-0.08□□□□□ -2.42
RTF1Q92541 MIR9-2-201ENST00000384838 87 ntBASIC-0.08□□□□□ -2.42
RTF1Q92541 MIR889-201ENST00000401280 79 ntBASIC-0.08□□□□□ -2.42
RTF1Q92541 RNA5SP451-201ENST00000410588 110 ntBASIC-0.08□□□□□ -2.42
RTF1Q92541 RNU6-634P-201ENST00000459134 106 ntBASIC-0.08□□□□□ -2.42
RTF1Q92541 RNU7-55P-201ENST00000459426 62 ntBASIC-0.08□□□□□ -2.42
RTF1Q92541 RNY1P9-201ENST00000532431 109 ntBASIC-0.08□□□□□ -2.42
RTF1Q92541 MIR4723-201ENST00000585070 81 ntBASIC-0.08□□□□□ -2.42
RTF1Q92541 RNU6-895P-201ENST00000384125 103 ntBASIC-0.09□□□□□ -2.42
RTF1Q92541 RNU6-871P-201ENST00000516122 100 ntBASIC-0.09□□□□□ -2.42
RTF1Q92541 AC090617.8-201ENST00000623339 167 ntBASIC-0.09□□□□□ -2.42
RTF1Q92541 MIR655-201ENST00000362159 97 ntBASIC-0.1□□□□□ -2.43
RTF1Q92541 SNORD115-31-201ENST00000365318 82 ntBASIC-0.1□□□□□ -2.43
RTF1Q92541 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.1□□□□□ -2.43
RTF1Q92541 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.11□□□□□ -2.43
RTF1Q92541 SNORA18.1-201ENST00000363418 128 ntBASIC-0.11□□□□□ -2.43
RTF1Q92541 SNORA32.1-201ENST00000364514 115 ntBASIC-0.11□□□□□ -2.43
RTF1Q92541 SNX3P1X-201ENST00000414887 175 ntBASIC-0.11□□□□□ -2.43
RTF1Q92541 RNA5SP470-201ENST00000516463 106 ntBASIC-0.11□□□□□ -2.43
RTF1Q92541 RNU6-668P-201ENST00000364180 107 ntBASIC-0.12□□□□□ -2.43
RTF1Q92541 SNORD115-23-201ENST00000364461 82 ntBASIC-0.13□□□□□ -2.43
RTF1Q92541 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.13□□□□□ -2.43
RTF1Q92541 MIR1255B2-201ENST00000408618 67 ntBASIC-0.13□□□□□ -2.43
RTF1Q92541 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.13□□□□□ -2.43
RTF1Q92541 RNU6-973P-201ENST00000364690 107 ntBASIC-0.14□□□□□ -2.43
RTF1Q92541 U2.7-201ENST00000619197 100 ntBASIC-0.14□□□□□ -2.43
RTF1Q92541 AL021921.1-201ENST00000442774 93 ntBASIC-0.15□□□□□ -2.43
RTF1Q92541 snoR1.1-201ENST00000628177 80 ntBASIC-0.15□□□□□ -2.43
RTF1Q92541 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.16□□□□□ -2.44
RTF1Q92541 AL391099.1-201ENST00000624635 187 ntBASIC-0.16□□□□□ -2.44
RTF1Q92541 RNA5SP215-201ENST00000363440 122 ntBASIC-0.17□□□□□ -2.44
RTF1Q92541 SNORD116-24-201ENST00000384549 92 ntBASIC-0.17□□□□□ -2.44
RTF1Q92541 RNU6-540P-201ENST00000384622 101 ntBASIC-0.17□□□□□ -2.44
RTF1Q92541 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.17□□□□□ -2.44
RTF1Q92541 RNU4-63P-201ENST00000411313 118 ntBASIC-0.17□□□□□ -2.44
RTF1Q92541 MIR4432-201ENST00000581823 84 ntBASIC-0.17□□□□□ -2.44
RTF1Q92541 SNORD114-12-201ENST00000365400 75 ntBASIC-0.18□□□□□ -2.44
RTF1Q92541 AC096531.1-201ENST00000419107 107 ntBASIC-0.18□□□□□ -2.44
RTF1Q92541 RNU7-154P-201ENST00000516194 62 ntBASIC-0.18□□□□□ -2.44
RTF1Q92541 MIR3681-201ENST00000580089 72 ntBASIC-0.18□□□□□ -2.44
RTF1Q92541 MIR4263-201ENST00000584745 83 ntBASIC-0.18□□□□□ -2.44
RTF1Q92541 SNORD4A-201ENST00000459174 72 ntBASIC-0.19□□□□□ -2.44
RTF1Q92541 MIR3666-201ENST00000607845 111 ntBASIC-0.19□□□□□ -2.44
RTF1Q92541 MIR548C-201ENST00000384815 97 ntBASIC-0.2□□□□□ -2.44
RTF1Q92541 RNU6-518P-201ENST00000516056 96 ntBASIC-0.2□□□□□ -2.44
RTF1Q92541 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.21□□□□□ -2.44
RTF1Q92541 RNU6-901P-201ENST00000384593 106 ntBASIC-0.21□□□□□ -2.44
RTF1Q92541 RNU6-663P-201ENST00000391105 106 ntBASIC-0.21□□□□□ -2.44
RTF1Q92541 MIR519A2-201ENST00000384990 87 ntBASIC-0.22□□□□□ -2.44
RTF1Q92541 MIR517B-201ENST00000385102 67 ntBASIC-0.22□□□□□ -2.44
RTF1Q92541 RNU7-174P-201ENST00000516248 59 ntBASIC-0.22□□□□□ -2.44
RTF1Q92541 uc_338.36-201ENST00000622331 158 ntBASIC-0.22□□□□□ -2.44
RTF1Q92541 SNORD56B-201ENST00000384713 71 ntBASIC-0.23□□□□□ -2.45
RTF1Q92541 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.23□□□□□ -2.45
RTF1Q92541 MIR548AX-201ENST00000580117 73 ntBASIC-0.23□□□□□ -2.45
RTF1Q92541 AL353803.5-201ENST00000599815 141 ntBASIC-0.23□□□□□ -2.45
RTF1Q92541 SNORA62.4-201ENST00000365504 151 ntBASIC-0.24□□□□□ -2.45
RTF1Q92541 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.24□□□□□ -2.45
RTF1Q92541 AL590491.3-201ENST00000610731 82 ntBASIC-0.24□□□□□ -2.45
RTF1Q92541 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.24□□□□□ -2.45
RTF1Q92541 RNU6-698P-201ENST00000363523 107 ntBASIC-0.25□□□□□ -2.45
RTF1Q92541 RNU6-34P-201ENST00000364874 107 ntBASIC-0.25□□□□□ -2.45
RTF1Q92541 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.25□□□□□ -2.45
RTF1Q92541 SNORD30.1-201ENST00000391309 70 ntBASIC-0.25□□□□□ -2.45
RTF1Q92541 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.26□□□□□ -2.45
RTF1Q92541 RNU6-649P-201ENST00000384463 107 ntBASIC-0.26□□□□□ -2.45
RTF1Q92541 RNU6-539P-201ENST00000516665 103 ntBASIC-0.26□□□□□ -2.45
RTF1Q92541 RNA5SP66-201ENST00000517178 101 ntBASIC-0.26□□□□□ -2.45
RTF1Q92541 U4.2-201ENST00000618561 85 ntBASIC-0.26□□□□□ -2.45
RTF1Q92541 SNORD75.1-201ENST00000408373 60 ntBASIC-0.27□□□□□ -2.45
RTF1Q92541 RNA5SP300-201ENST00000391197 107 ntBASIC-0.28□□□□□ -2.45
RTF1Q92541 MIR4280-201ENST00000582178 76 ntBASIC-0.29□□□□□ -2.46
RTF1Q92541 MIR6854-201ENST00000614935 69 ntBASIC-0.29□□□□□ -2.46
RTF1Q92541 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.3□□□□□ -2.46
RTF1Q92541 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
RTF1Q92541 RNU6-630P-201ENST00000391258 106 ntBASIC-0.3□□□□□ -2.46
RTF1Q92541 RNU6-542P-201ENST00000516405 103 ntBASIC-0.3□□□□□ -2.46
RTF1Q92541 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.3□□□□□ -2.46
RTF1Q92541 SNORA25.4-201ENST00000363666 124 ntBASIC-0.31□□□□□ -2.46
RTF1Q92541 RNA5SP275-201ENST00000363936 118 ntBASIC-0.31□□□□□ -2.46
RTF1Q92541 MIR548V-201ENST00000584165 80 ntBASIC-0.31□□□□□ -2.46
RTF1Q92541 U6.111-201ENST00000636093 83 ntBASIC-0.31□□□□□ -2.46
RTF1Q92541 AC093726.3-201ENST00000637588 150 ntBASIC-0.31□□□□□ -2.46
RTF1Q92541 MIR601-201ENST00000385256 79 ntBASIC-0.32□□□□□ -2.46
RTF1Q92541 AL445193.1-201ENST00000441183 141 ntBASIC-0.32□□□□□ -2.46
RTF1Q92541 MIR5704-201ENST00000584029 77 ntBASIC-0.32□□□□□ -2.46
RTF1Q92541 MIR6851-201ENST00000617060 67 ntBASIC-0.32□□□□□ -2.46
RTF1Q92541 MIR4788-201ENST00000639104 80 ntBASIC-0.32□□□□□ -2.46
RTF1Q92541 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.33□□□□□ -2.46
RTF1Q92541 SNORD113-2-201ENST00000391082 72 ntBASIC-0.33□□□□□ -2.46
RTF1Q92541 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
RTF1Q92541 MIR548AZ-201ENST00000616567 95 ntBASIC-0.33□□□□□ -2.46
RTF1Q92541 AC114801.3-201ENST00000510231 177 ntBASIC-0.34□□□□□ -2.46
RTF1Q92541 U4.4-201ENST00000620626 117 ntBASIC-0.34□□□□□ -2.46
RTF1Q92541 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.35□□□□□ -2.47
RTF1Q92541 MIR630-201ENST00000384957 97 ntBASIC-0.35□□□□□ -2.47
RTF1Q92541 AC114755.3-201ENST00000481111 251 ntBASIC-0.35□□□□□ -2.47
RTF1Q92541 MIR4464-201ENST00000580818 92 ntBASIC-0.35□□□□□ -2.47
RTF1Q92541 AC005520.4-201ENST00000604337 90 ntBASIC-0.36□□□□□ -2.47
RTF1Q92541 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms