Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MIR876-201ENST00000401147 81 ntBASIC1.21□□□□□ -2.22
NKX2-3Q8TAU0 U7.5-201ENST00000517224 61 ntBASIC1.21□□□□□ -2.22
NKX2-3Q8TAU0 MIR3973-201ENST00000579824 107 ntBASIC1.21□□□□□ -2.22
NKX2-3Q8TAU0 RNA5SP257-201ENST00000363023 116 ntBASIC1.2□□□□□ -2.22
NKX2-3Q8TAU0 RNU4-38P-201ENST00000364472 129 ntBASIC1.2□□□□□ -2.22
NKX2-3Q8TAU0 Y_RNA.423-201ENST00000384057 113 ntBASIC1.2□□□□□ -2.22
NKX2-3Q8TAU0 SNORD63.1-201ENST00000516178 80 ntBASIC1.2□□□□□ -2.22
NKX2-3Q8TAU0 ACA64.5-201ENST00000516207 127 ntBASIC1.2□□□□□ -2.22
NKX2-3Q8TAU0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NKX2-3Q8TAU0 SNORA36.2-201ENST00000384004 127 ntBASIC1.19□□□□□ -2.22
NKX2-3Q8TAU0 MIR548H4-201ENST00000408689 111 ntBASIC1.19□□□□□ -2.22
NKX2-3Q8TAU0 RNU6-1174P-201ENST00000517278 101 ntBASIC1.19□□□□□ -2.22
NKX2-3Q8TAU0 MTRNR2L9-201ENST00000622562 75 ntBASIC1.19□□□□□ -2.22
NKX2-3Q8TAU0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
NKX2-3Q8TAU0 Y_RNA.321-201ENST00000365149 102 ntBASIC1.18□□□□□ -2.22
NKX2-3Q8TAU0 RNU6-974P-201ENST00000384099 108 ntBASIC1.18□□□□□ -2.22
NKX2-3Q8TAU0 MIR532-201ENST00000385025 91 ntBASIC1.18□□□□□ -2.22
NKX2-3Q8TAU0 snoR1.1-201ENST00000628177 80 ntBASIC1.18□□□□□ -2.22
NKX2-3Q8TAU0 SNORA62.4-201ENST00000365504 151 ntBASIC1.17□□□□□ -2.22
NKX2-3Q8TAU0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
NKX2-3Q8TAU0 SNORD71-201ENST00000411292 86 ntBASIC1.16□□□□□ -2.22
NKX2-3Q8TAU0 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
NKX2-3Q8TAU0 MIR4464-201ENST00000580818 92 ntBASIC1.16□□□□□ -2.22
NKX2-3Q8TAU0 AC104408.1-201ENST00000605241 170 ntBASIC1.16□□□□□ -2.22
NKX2-3Q8TAU0 MIR6755-201ENST00000619993 66 ntBASIC1.16□□□□□ -2.22
NKX2-3Q8TAU0 MIR6888-201ENST00000621977 67 ntBASIC1.16□□□□□ -2.22
NKX2-3Q8TAU0 MIR518A1-201ENST00000385068 85 ntBASIC1.15□□□□□ -2.23
NKX2-3Q8TAU0 MIR3925-201ENST00000584674 77 ntBASIC1.15□□□□□ -2.23
NKX2-3Q8TAU0 MIR924-201ENST00000638017 53 ntBASIC1.15□□□□□ -2.23
NKX2-3Q8TAU0 AP000676.1-201ENST00000533307 52 ntBASIC1.14□□□□□ -2.23
NKX2-3Q8TAU0 MIR3170-201ENST00000582699 77 ntBASIC1.14□□□□□ -2.23
NKX2-3Q8TAU0 AL445584.3-201ENST00000617173 78 ntBASIC1.14□□□□□ -2.23
NKX2-3Q8TAU0 MIR608-201ENST00000384820 100 ntBASIC1.13□□□□□ -2.23
NKX2-3Q8TAU0 RNU7-88P-201ENST00000458752 63 ntBASIC1.13□□□□□ -2.23
NKX2-3Q8TAU0 MIR4698-201ENST00000577795 80 ntBASIC1.13□□□□□ -2.23
NKX2-3Q8TAU0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
NKX2-3Q8TAU0 RNA5SP128-201ENST00000365305 116 ntBASIC1.12□□□□□ -2.23
NKX2-3Q8TAU0 MIR760-201ENST00000390220 80 ntBASIC1.12□□□□□ -2.23
NKX2-3Q8TAU0 Y_RNA.613-201ENST00000410726 97 ntBASIC1.11□□□□□ -2.23
NKX2-3Q8TAU0 RNU6-863P-201ENST00000515989 104 ntBASIC1.11□□□□□ -2.23
NKX2-3Q8TAU0 SNORD63.2-201ENST00000516303 64 ntBASIC1.11□□□□□ -2.23
NKX2-3Q8TAU0 RNA5SP121-201ENST00000516537 101 ntBASIC1.11□□□□□ -2.23
NKX2-3Q8TAU0 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
NKX2-3Q8TAU0 MIR6513-201ENST00000621188 64 ntBASIC1.1□□□□□ -2.23
NKX2-3Q8TAU0 AC010487.4-201ENST00000637027 61 ntBASIC1.1□□□□□ -2.23
NKX2-3Q8TAU0 SNORD114-23-201ENST00000363536 72 ntBASIC1.09□□□□□ -2.23
NKX2-3Q8TAU0 RNU6-110P-201ENST00000384508 104 ntBASIC1.09□□□□□ -2.23
NKX2-3Q8TAU0 RNU7-55P-201ENST00000459426 62 ntBASIC1.09□□□□□ -2.23
NKX2-3Q8TAU0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.09□□□□□ -2.23
NKX2-3Q8TAU0 RNA5SP98-201ENST00000363158 137 ntBASIC1.08□□□□□ -2.24
NKX2-3Q8TAU0 RNU6-530P-201ENST00000391180 107 ntBASIC1.08□□□□□ -2.24
NKX2-3Q8TAU0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.08□□□□□ -2.24
NKX2-3Q8TAU0 RNU4-54P-201ENST00000516428 129 ntBASIC1.08□□□□□ -2.24
NKX2-3Q8TAU0 RNU6-1008P-201ENST00000384160 104 ntBASIC1.07□□□□□ -2.24
NKX2-3Q8TAU0 MIR4714-201ENST00000580728 77 ntBASIC1.07□□□□□ -2.24
NKX2-3Q8TAU0 RNU6-1111P-201ENST00000391118 107 ntBASIC1.06□□□□□ -2.24
NKX2-3Q8TAU0 MIR1468-201ENST00000410600 86 ntBASIC1.06□□□□□ -2.24
NKX2-3Q8TAU0 RNA5SP330-201ENST00000517096 96 ntBASIC1.06□□□□□ -2.24
NKX2-3Q8TAU0 AL391099.1-201ENST00000624635 187 ntBASIC1.06□□□□□ -2.24
NKX2-3Q8TAU0 RNU6-973P-201ENST00000364690 107 ntBASIC1.05□□□□□ -2.24
NKX2-3Q8TAU0 SCARNA11.2-201ENST00000517183 154 ntBASIC1.05□□□□□ -2.24
NKX2-3Q8TAU0 RNU6-1133P-201ENST00000410963 100 ntBASIC1.04□□□□□ -2.24
NKX2-3Q8TAU0 RNU6-894P-201ENST00000517094 105 ntBASIC1.04□□□□□ -2.24
NKX2-3Q8TAU0 RNU6-1326P-201ENST00000391262 107 ntBASIC1.03□□□□□ -2.24
NKX2-3Q8TAU0 MIR936-201ENST00000401264 98 ntBASIC1.03□□□□□ -2.24
NKX2-3Q8TAU0 RNU6-1238P-201ENST00000517215 102 ntBASIC1.03□□□□□ -2.24
NKX2-3Q8TAU0 AC096531.1-201ENST00000419107 107 ntBASIC1.02□□□□□ -2.25
NKX2-3Q8TAU0 MIR499B-201ENST00000636498 73 ntBASIC1.02□□□□□ -2.25
NKX2-3Q8TAU0 MIR4317-201ENST00000637586 65 ntBASIC1.02□□□□□ -2.25
NKX2-3Q8TAU0 RNU6-900P-201ENST00000384498 102 ntBASIC1.01□□□□□ -2.25
NKX2-3Q8TAU0 MIR8087-201ENST00000612745 78 ntBASIC1.01□□□□□ -2.25
NKX2-3Q8TAU0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1□□□□□ -2.25
NKX2-3Q8TAU0 SNORA27.2-201ENST00000363365 126 ntBASIC0.99□□□□□ -2.25
NKX2-3Q8TAU0 Y_RNA.345-201ENST00000365384 92 ntBASIC0.99□□□□□ -2.25
NKX2-3Q8TAU0 MIR6507-201ENST00000613630 70 ntBASIC0.99□□□□□ -2.25
NKX2-3Q8TAU0 RNU6-732P-201ENST00000516033 103 ntBASIC0.98□□□□□ -2.25
NKX2-3Q8TAU0 AC138207.3-201ENST00000585289 166 ntBASIC0.98□□□□□ -2.25
NKX2-3Q8TAU0 RNU6-1047P-201ENST00000364418 107 ntBASIC0.97□□□□□ -2.25
NKX2-3Q8TAU0 AC108740.1-201ENST00000498629 225 ntBASIC0.97□□□□□ -2.25
NKX2-3Q8TAU0 uc_338.17-201ENST00000619633 179 ntBASIC0.97□□□□□ -2.25
NKX2-3Q8TAU0 RNU6-30P-201ENST00000384561 107 ntBASIC0.96□□□□□ -2.26
NKX2-3Q8TAU0 MIR330-201ENST00000362196 94 ntBASIC0.95□□□□□ -2.26
NKX2-3Q8TAU0 snoU13.19-201ENST00000459148 104 ntBASIC0.95□□□□□ -2.26
NKX2-3Q8TAU0 PSMC1P5-201ENST00000512850 177 ntBASIC0.95□□□□□ -2.26
NKX2-3Q8TAU0 Y_RNA.699-201ENST00000516803 93 ntBASIC0.95□□□□□ -2.26
NKX2-3Q8TAU0 MIR4653-201ENST00000585107 83 ntBASIC0.95□□□□□ -2.26
NKX2-3Q8TAU0 uc_338.36-201ENST00000622331 158 ntBASIC0.95□□□□□ -2.26
NKX2-3Q8TAU0 RNU6-351P-201ENST00000516097 100 ntBASIC0.94□□□□□ -2.26
NKX2-3Q8TAU0 SNORD44.1-201ENST00000363202 61 ntBASIC0.93□□□□□ -2.26
NKX2-3Q8TAU0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.93□□□□□ -2.26
NKX2-3Q8TAU0 RNU6-258P-201ENST00000390884 101 ntBASIC0.93□□□□□ -2.26
NKX2-3Q8TAU0 RNU7-129P-201ENST00000516128 62 ntBASIC0.93□□□□□ -2.26
NKX2-3Q8TAU0 MIR6835-201ENST00000621552 64 ntBASIC0.93□□□□□ -2.26
NKX2-3Q8TAU0 RNU6-361P-201ENST00000364454 107 ntBASIC0.92□□□□□ -2.26
NKX2-3Q8TAU0 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
NKX2-3Q8TAU0 MIR4426-201ENST00000640330 63 ntBASIC0.92□□□□□ -2.26
NKX2-3Q8TAU0 SNORA42.1-201ENST00000363515 137 ntBASIC0.91□□□□□ -2.26
NKX2-3Q8TAU0 Y_RNA.206-201ENST00000364136 102 ntBASIC0.91□□□□□ -2.26
NKX2-3Q8TAU0 SNORD19-201ENST00000391191 68 ntBASIC0.9□□□□□ -2.27
NKX2-3Q8TAU0 RNA5SP285-201ENST00000516619 119 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 215.8 ms