Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 MIR548AG1-201ENST00000579932 66 ntBASIC-1.22□□□□□ -2.6
CACNA1BQ00975 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.22□□□□□ -2.6
CACNA1BQ00975 U2.7-201ENST00000619197 100 ntBASIC-1.22□□□□□ -2.6
CACNA1BQ00975 U6.95-201ENST00000636931 70 ntBASIC-1.22□□□□□ -2.6
CACNA1BQ00975 RNU6-379P-201ENST00000363813 104 ntBASIC-1.22□□□□□ -2.61
CACNA1BQ00975 RNU6-574P-201ENST00000384265 107 ntBASIC-1.22□□□□□ -2.61
CACNA1BQ00975 RNU6-887P-201ENST00000410660 100 ntBASIC-1.22□□□□□ -2.61
CACNA1BQ00975 RNU6-182P-201ENST00000516970 105 ntBASIC-1.22□□□□□ -2.61
CACNA1BQ00975 MTND5P41-201ENST00000517498 206 ntBASIC-1.22□□□□□ -2.61
CACNA1BQ00975 AC012531.4-201ENST00000616509 177 ntBASIC-1.22□□□□□ -2.61
CACNA1BQ00975 RNU6-704P-201ENST00000364162 103 ntBASIC-1.23□□□□□ -2.61
CACNA1BQ00975 RNU6-696P-201ENST00000390834 107 ntBASIC-1.23□□□□□ -2.61
CACNA1BQ00975 MIR4503-201ENST00000582187 83 ntBASIC-1.23□□□□□ -2.61
CACNA1BQ00975 AL450471.1-201ENST00000447509 127 ntBASIC-1.23□□□□□ -2.61
CACNA1BQ00975 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
CACNA1BQ00975 RNU6-458P-201ENST00000384179 107 ntBASIC-1.24□□□□□ -2.61
CACNA1BQ00975 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.24□□□□□ -2.61
CACNA1BQ00975 U6.58-201ENST00000613107 107 ntBASIC-1.24□□□□□ -2.61
CACNA1BQ00975 RNU6-196P-201ENST00000384315 107 ntBASIC-1.24□□□□□ -2.61
CACNA1BQ00975 RNU6-630P-201ENST00000391258 106 ntBASIC-1.25□□□□□ -2.61
CACNA1BQ00975 RNU7-200P-201ENST00000516105 62 ntBASIC-1.25□□□□□ -2.61
CACNA1BQ00975 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.25□□□□□ -2.61
CACNA1BQ00975 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.26□□□□□ -2.61
CACNA1BQ00975 MIR548C-201ENST00000384815 97 ntBASIC-1.26□□□□□ -2.61
CACNA1BQ00975 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
CACNA1BQ00975 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.26□□□□□ -2.61
CACNA1BQ00975 RNU7-174P-201ENST00000516248 59 ntBASIC-1.26□□□□□ -2.61
CACNA1BQ00975 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.26□□□□□ -2.61
CACNA1BQ00975 RNU6-971P-201ENST00000516920 106 ntBASIC-1.26□□□□□ -2.61
CACNA1BQ00975 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.27□□□□□ -2.61
CACNA1BQ00975 RNU6-257P-201ENST00000410238 98 ntBASIC-1.27□□□□□ -2.61
CACNA1BQ00975 RNU6-168P-201ENST00000516189 101 ntBASIC-1.27□□□□□ -2.61
CACNA1BQ00975 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.27□□□□□ -2.61
CACNA1BQ00975 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.27□□□□□ -2.61
CACNA1BQ00975 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.27□□□□□ -2.61
CACNA1BQ00975 MIR3675-201ENST00000583661 73 ntBASIC-1.27□□□□□ -2.61
CACNA1BQ00975 RNU6-694P-201ENST00000364071 147 ntBASIC-1.28□□□□□ -2.61
CACNA1BQ00975 MIR487B-201ENST00000385021 84 ntBASIC-1.28□□□□□ -2.61
CACNA1BQ00975 AC120024.2-201ENST00000576526 175 ntBASIC-1.28□□□□□ -2.61
CACNA1BQ00975 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.28□□□□□ -2.61
CACNA1BQ00975 RNU6-645P-201ENST00000364649 106 ntBASIC-1.28□□□□□ -2.61
CACNA1BQ00975 MIR2052-201ENST00000636055 55 ntBASIC-1.28□□□□□ -2.61
CACNA1BQ00975 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.29□□□□□ -2.62
CACNA1BQ00975 RNU6-478P-201ENST00000363904 110 ntBASIC-1.29□□□□□ -2.62
CACNA1BQ00975 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.29□□□□□ -2.62
CACNA1BQ00975 RNU6-987P-201ENST00000384759 104 ntBASIC-1.29□□□□□ -2.62
CACNA1BQ00975 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.29□□□□□ -2.62
CACNA1BQ00975 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.29□□□□□ -2.62
CACNA1BQ00975 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.29□□□□□ -2.62
CACNA1BQ00975 RNU6-400P-201ENST00000391173 106 ntBASIC-1.29□□□□□ -2.62
CACNA1BQ00975 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.29□□□□□ -2.62
CACNA1BQ00975 RNU6-303P-201ENST00000517091 106 ntBASIC-1.29□□□□□ -2.62
CACNA1BQ00975 MIR3914-2-201ENST00000637339 95 ntBASIC-1.29□□□□□ -2.62
CACNA1BQ00975 RNU6-608P-201ENST00000383927 104 ntBASIC-1.3□□□□□ -2.62
CACNA1BQ00975 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.3□□□□□ -2.62
CACNA1BQ00975 SNORD116-21-201ENST00000384507 92 ntBASIC-1.31□□□□□ -2.62
CACNA1BQ00975 RPL35AP4-201ENST00000412007 102 ntBASIC-1.31□□□□□ -2.62
CACNA1BQ00975 U7.3-201ENST00000616123 62 ntBASIC-1.31□□□□□ -2.62
CACNA1BQ00975 RNU6-230P-201ENST00000362457 104 ntBASIC-1.31□□□□□ -2.62
CACNA1BQ00975 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.31□□□□□ -2.62
CACNA1BQ00975 SNORA19-201ENST00000384737 128 ntBASIC-1.31□□□□□ -2.62
CACNA1BQ00975 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.31□□□□□ -2.62
CACNA1BQ00975 RNU6-162P-201ENST00000516228 103 ntBASIC-1.31□□□□□ -2.62
CACNA1BQ00975 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.31□□□□□ -2.62
CACNA1BQ00975 RNU6-698P-201ENST00000363523 107 ntBASIC-1.32□□□□□ -2.62
CACNA1BQ00975 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.32□□□□□ -2.62
CACNA1BQ00975 RNU6-34P-201ENST00000364874 107 ntBASIC-1.32□□□□□ -2.62
CACNA1BQ00975 RNU6-886P-201ENST00000384319 105 ntBASIC-1.32□□□□□ -2.62
CACNA1BQ00975 RNU6-463P-201ENST00000384340 107 ntBASIC-1.32□□□□□ -2.62
CACNA1BQ00975 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.32□□□□□ -2.62
CACNA1BQ00975 RNU6-982P-201ENST00000516216 102 ntBASIC-1.32□□□□□ -2.62
CACNA1BQ00975 MIR429-201ENST00000362106 83 ntBASIC-1.32□□□□□ -2.62
CACNA1BQ00975 RNU6-79P-201ENST00000362511 107 ntBASIC-1.32□□□□□ -2.62
CACNA1BQ00975 U4.4-201ENST00000620626 117 ntBASIC-1.32□□□□□ -2.62
CACNA1BQ00975 MIR590-201ENST00000385008 97 ntBASIC-1.33□□□□□ -2.62
CACNA1BQ00975 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.33□□□□□ -2.62
CACNA1BQ00975 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.33□□□□□ -2.62
CACNA1BQ00975 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.34□□□□□ -2.62
CACNA1BQ00975 RNU6-194P-201ENST00000363862 105 ntBASIC-1.34□□□□□ -2.62
CACNA1BQ00975 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.34□□□□□ -2.62
CACNA1BQ00975 RNU6-695P-201ENST00000391157 104 ntBASIC-1.34□□□□□ -2.62
CACNA1BQ00975 MTND4LP1-201ENST00000446263 157 ntBASIC-1.34□□□□□ -2.62
CACNA1BQ00975 RNU6-659P-201ENST00000516454 104 ntBASIC-1.34□□□□□ -2.62
CACNA1BQ00975 RNU6-255P-201ENST00000516957 105 ntBASIC-1.34□□□□□ -2.62
CACNA1BQ00975 RNU6-554P-201ENST00000410466 106 ntBASIC-1.35□□□□□ -2.63
CACNA1BQ00975 MIR630-201ENST00000384957 97 ntBASIC-1.35□□□□□ -2.63
CACNA1BQ00975 MIR23C-201ENST00000579846 100 ntBASIC-1.35□□□□□ -2.63
CACNA1BQ00975 MIR3170-201ENST00000582699 77 ntBASIC-1.35□□□□□ -2.63
CACNA1BQ00975 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.36□□□□□ -2.63
CACNA1BQ00975 MIR548AA1-201ENST00000384971 97 ntBASIC-1.36□□□□□ -2.63
CACNA1BQ00975 MTATP8P2-201ENST00000435212 202 ntBASIC-1.36□□□□□ -2.63
CACNA1BQ00975 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.36□□□□□ -2.63
CACNA1BQ00975 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.37□□□□□ -2.63
CACNA1BQ00975 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.37□□□□□ -2.63
CACNA1BQ00975 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.37□□□□□ -2.63
CACNA1BQ00975 RNU6-633P-201ENST00000362612 103 ntBASIC-1.38□□□□□ -2.63
CACNA1BQ00975 RNU6-129P-201ENST00000391022 107 ntBASIC-1.38□□□□□ -2.63
CACNA1BQ00975 SNORD45.1-201ENST00000363181 77 ntBASIC-1.39□□□□□ -2.63
CACNA1BQ00975 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.39□□□□□ -2.63
CACNA1BQ00975 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 372.8 ms