Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MIR8068-201ENST00000618032 68 ntBASIC-0.19□□□□□ -2.44
RAE1P78406 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
RAE1P78406 AL445193.1-201ENST00000441183 141 ntBASIC-0.2□□□□□ -2.44
RAE1P78406 MIR4263-201ENST00000584745 83 ntBASIC-0.2□□□□□ -2.44
RAE1P78406 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.2□□□□□ -2.44
RAE1P78406 RNA5SP215-201ENST00000363440 122 ntBASIC-0.21□□□□□ -2.44
RAE1P78406 RNA5SP300-201ENST00000391197 107 ntBASIC-0.21□□□□□ -2.44
RAE1P78406 AC114755.3-201ENST00000481111 251 ntBASIC-0.21□□□□□ -2.44
RAE1P78406 RNA5SP66-201ENST00000517178 101 ntBASIC-0.21□□□□□ -2.44
RAE1P78406 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.22□□□□□ -2.44
RAE1P78406 MIR517B-201ENST00000385102 67 ntBASIC-0.22□□□□□ -2.44
RAE1P78406 RNU6-663P-201ENST00000391105 106 ntBASIC-0.22□□□□□ -2.44
RAE1P78406 RNU6-871P-201ENST00000516122 100 ntBASIC-0.22□□□□□ -2.44
RAE1P78406 MIR548AG1-201ENST00000579932 66 ntBASIC-0.22□□□□□ -2.44
RAE1P78406 MIR4464-201ENST00000580818 92 ntBASIC-0.22□□□□□ -2.44
RAE1P78406 MIR6854-201ENST00000614935 69 ntBASIC-0.22□□□□□ -2.44
RAE1P78406 MIR4788-201ENST00000639104 80 ntBASIC-0.22□□□□□ -2.44
RAE1P78406 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.23□□□□□ -2.45
RAE1P78406 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.23□□□□□ -2.45
RAE1P78406 MIR6759-201ENST00000638110 65 ntBASIC-0.23□□□□□ -2.45
RAE1P78406 RNU6-698P-201ENST00000363523 107 ntBASIC-0.24□□□□□ -2.45
RAE1P78406 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.24□□□□□ -2.45
RAE1P78406 RNU6-34P-201ENST00000364874 107 ntBASIC-0.24□□□□□ -2.45
RAE1P78406 SNORA62.4-201ENST00000365504 151 ntBASIC-0.24□□□□□ -2.45
RAE1P78406 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.24□□□□□ -2.45
RAE1P78406 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
RAE1P78406 SNORD38.3-201ENST00000516599 73 ntBASIC-0.24□□□□□ -2.45
RAE1P78406 MIR548V-201ENST00000584165 80 ntBASIC-0.24□□□□□ -2.45
RAE1P78406 MIR6851-201ENST00000617060 67 ntBASIC-0.24□□□□□ -2.45
RAE1P78406 U4.4-201ENST00000620626 117 ntBASIC-0.24□□□□□ -2.45
RAE1P78406 MIR6888-201ENST00000621977 67 ntBASIC-0.24□□□□□ -2.45
RAE1P78406 SNORD114-11-201ENST00000363738 75 ntBASIC-0.25□□□□□ -2.45
RAE1P78406 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.25□□□□□ -2.45
RAE1P78406 MIR630-201ENST00000384957 97 ntBASIC-0.25□□□□□ -2.45
RAE1P78406 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.25□□□□□ -2.45
RAE1P78406 SNORD30.1-201ENST00000391309 70 ntBASIC-0.25□□□□□ -2.45
RAE1P78406 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.25□□□□□ -2.45
RAE1P78406 SNORD114-31-201ENST00000363219 75 ntBASIC-0.26□□□□□ -2.45
RAE1P78406 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.26□□□□□ -2.45
RAE1P78406 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.26□□□□□ -2.45
RAE1P78406 IGLVI-20-201ENST00000519296 130 ntBASIC-0.26□□□□□ -2.45
RAE1P78406 AL445584.3-201ENST00000617173 78 ntBASIC-0.26□□□□□ -2.45
RAE1P78406 AC093726.3-201ENST00000637588 150 ntBASIC-0.26□□□□□ -2.45
RAE1P78406 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.27□□□□□ -2.45
RAE1P78406 RNU6-630P-201ENST00000391258 106 ntBASIC-0.27□□□□□ -2.45
RAE1P78406 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.28□□□□□ -2.45
RAE1P78406 RNU6-649P-201ENST00000384463 107 ntBASIC-0.28□□□□□ -2.45
RAE1P78406 RNU6-539P-201ENST00000516665 103 ntBASIC-0.29□□□□□ -2.46
RAE1P78406 RNA5SP169-201ENST00000517268 117 ntBASIC-0.29□□□□□ -2.46
RAE1P78406 AC108676.2-201ENST00000605225 163 ntBASIC-0.29□□□□□ -2.46
RAE1P78406 U6.111-201ENST00000636093 83 ntBASIC-0.29□□□□□ -2.46
RAE1P78406 RNU6-542P-201ENST00000516405 103 ntBASIC-0.3□□□□□ -2.46
RAE1P78406 MIR5589-201ENST00000579442 60 ntBASIC-0.3□□□□□ -2.46
RAE1P78406 AC005520.4-201ENST00000604337 90 ntBASIC-0.3□□□□□ -2.46
RAE1P78406 SNORA25.4-201ENST00000363666 124 ntBASIC-0.31□□□□□ -2.46
RAE1P78406 MIR124-2-201ENST00000385081 109 ntBASIC-0.31□□□□□ -2.46
RAE1P78406 SNORD113-2-201ENST00000391082 72 ntBASIC-0.31□□□□□ -2.46
RAE1P78406 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.32□□□□□ -2.46
RAE1P78406 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.32□□□□□ -2.46
RAE1P78406 MIR4802-201ENST00000581881 80 ntBASIC-0.32□□□□□ -2.46
RAE1P78406 SNORD74.6-201ENST00000364796 70 ntBASIC-0.33□□□□□ -2.46
RAE1P78406 RNU6-246P-201ENST00000384702 107 ntBASIC-0.33□□□□□ -2.46
RAE1P78406 MIR518B-201ENST00000385127 83 ntBASIC-0.33□□□□□ -2.46
RAE1P78406 MIR204-201ENST00000385200 110 ntBASIC-0.33□□□□□ -2.46
RAE1P78406 AC114801.3-201ENST00000510231 177 ntBASIC-0.33□□□□□ -2.46
RAE1P78406 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.33□□□□□ -2.46
RAE1P78406 MIR527-201ENST00000385244 85 ntBASIC-0.34□□□□□ -2.46
RAE1P78406 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
RAE1P78406 SNORD22.1-201ENST00000516331 125 ntBASIC-0.34□□□□□ -2.46
RAE1P78406 MIR4636-201ENST00000582271 80 ntBASIC-0.34□□□□□ -2.46
RAE1P78406 SNORD14C-201ENST00000365382 88 ntBASIC-0.35□□□□□ -2.47
RAE1P78406 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.35□□□□□ -2.47
RAE1P78406 RNU6-800P-201ENST00000384473 103 ntBASIC-0.35□□□□□ -2.47
RAE1P78406 RNU6-35P-201ENST00000384530 107 ntBASIC-0.35□□□□□ -2.47
RAE1P78406 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.35□□□□□ -2.47
RAE1P78406 RNU6-320P-201ENST00000516511 106 ntBASIC-0.35□□□□□ -2.47
RAE1P78406 MIR4645-201ENST00000583158 77 ntBASIC-0.35□□□□□ -2.47
RAE1P78406 RNU6-924P-201ENST00000362926 108 ntBASIC-0.36□□□□□ -2.47
RAE1P78406 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.36□□□□□ -2.47
RAE1P78406 SNORA41B-201ENST00000384785 128 ntBASIC-0.36□□□□□ -2.47
RAE1P78406 SNORD126-201ENST00000459475 77 ntBASIC-0.36□□□□□ -2.47
RAE1P78406 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.37□□□□□ -2.47
RAE1P78406 RNU6-458P-201ENST00000384179 107 ntBASIC-0.37□□□□□ -2.47
RAE1P78406 MIR196A2-201ENST00000385189 110 ntBASIC-0.37□□□□□ -2.47
RAE1P78406 SNORA13-201ENST00000458790 133 ntBASIC-0.37□□□□□ -2.47
RAE1P78406 MIR3179-1-201ENST00000578940 84 ntBASIC-0.37□□□□□ -2.47
RAE1P78406 MIR3179-2-201ENST00000579107 84 ntBASIC-0.37□□□□□ -2.47
RAE1P78406 MIR3179-3-201ENST00000579566 84 ntBASIC-0.37□□□□□ -2.47
RAE1P78406 AP001180.6-201ENST00000584918 159 ntBASIC-0.37□□□□□ -2.47
RAE1P78406 U6.58-201ENST00000613107 107 ntBASIC-0.37□□□□□ -2.47
RAE1P78406 MIR3179-4-201ENST00000617599 84 ntBASIC-0.37□□□□□ -2.47
RAE1P78406 SNORD114-28-201ENST00000363610 72 ntBASIC-0.38□□□□□ -2.47
RAE1P78406 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.38□□□□□ -2.47
RAE1P78406 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.38□□□□□ -2.47
RAE1P78406 RNU6-721P-201ENST00000410155 105 ntBASIC-0.38□□□□□ -2.47
RAE1P78406 SNORD18.2-201ENST00000459604 70 ntBASIC-0.38□□□□□ -2.47
RAE1P78406 MIR4511-201ENST00000582784 87 ntBASIC-0.38□□□□□ -2.47
RAE1P78406 RNU6-92P-201ENST00000605893 104 ntBASIC-0.38□□□□□ -2.47
RAE1P78406 SNORD116-16-201ENST00000384533 92 ntBASIC-0.39□□□□□ -2.47
RAE1P78406 SNORD75.1-201ENST00000408373 60 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms