Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU6-668P-201ENST00000364180 107 ntBASIC-3.37□□□□□ -2.95
RPS28P62857 Y_RNA.292-201ENST00000364904 97 ntBASIC-3.37□□□□□ -2.95
RPS28P62857 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.37□□□□□ -2.95
RPS28P62857 RNU7-153P-201ENST00000516455 62 ntBASIC-3.37□□□□□ -2.95
RPS28P62857 RNU6-345P-201ENST00000517001 107 ntBASIC-3.37□□□□□ -2.95
RPS28P62857 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.38□□□□□ -2.95
RPS28P62857 RNU6-867P-201ENST00000364956 107 ntBASIC-3.38□□□□□ -2.95
RPS28P62857 SNORD37.2-201ENST00000391075 66 ntBASIC-3.38□□□□□ -2.95
RPS28P62857 MIR3121-201ENST00000579680 77 ntBASIC-3.38□□□□□ -2.95
RPS28P62857 AC090971.5-201ENST00000621102 293 ntBASIC-3.38□□□□□ -2.95
RPS28P62857 RNU6-330P-201ENST00000363015 107 ntBASIC-3.39□□□□□ -2.95
RPS28P62857 SNORD115-37-201ENST00000363768 82 ntBASIC-3.39□□□□□ -2.95
RPS28P62857 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.39□□□□□ -2.95
RPS28P62857 MIR1236-201ENST00000408340 102 ntBASIC-3.4□□□□□ -2.95
RPS28P62857 RNU6-554P-201ENST00000410466 106 ntBASIC-3.4□□□□□ -2.95
RPS28P62857 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.41□□□□□ -2.96
RPS28P62857 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-3.41□□□□□ -2.96
RPS28P62857 RNA5SP215-201ENST00000363440 122 ntBASIC-3.42□□□□□ -2.96
RPS28P62857 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.42□□□□□ -2.96
RPS28P62857 RNU7-160P-201ENST00000516660 62 ntBASIC-3.43□□□□□ -2.96
RPS28P62857 MIR3675-201ENST00000583661 73 ntBASIC-3.43□□□□□ -2.96
RPS28P62857 MIR3658-201ENST00000636291 56 ntBASIC-3.43□□□□□ -2.96
RPS28P62857 Y_RNA.70-201ENST00000362886 110 ntBASIC-3.44□□□□□ -2.96
RPS28P62857 SNORD58A-201ENST00000383875 65 ntBASIC-3.44□□□□□ -2.96
RPS28P62857 MT-TL1-201ENST00000386347 75 ntBASIC-3.44□□□□□ -2.96
RPS28P62857 Y_RNA.604-201ENST00000410574 102 ntBASIC-3.44□□□□□ -2.96
RPS28P62857 MIR4426-201ENST00000640330 63 ntBASIC-3.44□□□□□ -2.96
RPS28P62857 RNU6-590P-201ENST00000365039 107 ntBASIC-3.45□□□□□ -2.96
RPS28P62857 Y_RNA.309-201ENST00000365046 111 ntBASIC-3.45□□□□□ -2.96
RPS28P62857 RNU6-737P-201ENST00000365370 107 ntBASIC-3.45□□□□□ -2.96
RPS28P62857 RNU6-639P-201ENST00000384074 107 ntBASIC-3.45□□□□□ -2.96
RPS28P62857 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.45□□□□□ -2.96
RPS28P62857 Y_RNA.778-201ENST00000620203 90 ntBASIC-3.45□□□□□ -2.96
RPS28P62857 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.46□□□□□ -2.96
RPS28P62857 RNU6-795P-201ENST00000516323 103 ntBASIC-3.46□□□□□ -2.96
RPS28P62857 SNORA8.1-201ENST00000384250 140 ntBASIC-3.47□□□□□ -2.96
RPS28P62857 RNU6-781P-201ENST00000516377 101 ntBASIC-3.47□□□□□ -2.96
RPS28P62857 SNORD45.1-201ENST00000363181 77 ntBASIC-3.48□□□□□ -2.97
RPS28P62857 RNA5SP173-201ENST00000364857 136 ntBASIC-3.48□□□□□ -2.97
RPS28P62857 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.48□□□□□ -2.97
RPS28P62857 SNORD127-201ENST00000458892 86 ntBASIC-3.48□□□□□ -2.97
RPS28P62857 RNU6-300P-201ENST00000459080 104 ntBASIC-3.48□□□□□ -2.97
RPS28P62857 AL035470.1-201ENST00000622571 220 ntBASIC-3.48□□□□□ -2.97
RPS28P62857 Y_RNA.579-201ENST00000390939 94 ntBASIC-3.49□□□□□ -2.97
RPS28P62857 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-3.49□□□□□ -2.97
RPS28P62857 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.5□□□□□ -2.97
RPS28P62857 MTND4LP1-201ENST00000446263 157 ntBASIC-3.5□□□□□ -2.97
RPS28P62857 AC130289.1-201ENST00000577321 73 ntBASIC-3.5□□□□□ -2.97
RPS28P62857 MIR4643-201ENST00000577473 78 ntBASIC-3.51□□□□□ -2.97
RPS28P62857 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.52□□□□□ -2.97
RPS28P62857 SNORD115-45-201ENST00000391078 81 ntBASIC-3.52□□□□□ -2.97
RPS28P62857 RNU6-182P-201ENST00000516970 105 ntBASIC-3.52□□□□□ -2.97
RPS28P62857 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-3.52□□□□□ -2.97
RPS28P62857 RNU6-129P-201ENST00000391022 107 ntBASIC-3.53□□□□□ -2.97
RPS28P62857 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.53□□□□□ -2.97
RPS28P62857 AC113195.1-201ENST00000579952 141 ntBASIC-3.53□□□□□ -2.97
RPS28P62857 SNORD116-4-201ENST00000384733 96 ntBASIC-3.54□□□□□ -2.98
RPS28P62857 RNU6-972P-201ENST00000391208 107 ntBASIC-3.54□□□□□ -2.98
RPS28P62857 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.54□□□□□ -2.98
RPS28P62857 RNU6-810P-201ENST00000364001 107 ntBASIC-3.55□□□□□ -2.98
RPS28P62857 RNU6-755P-201ENST00000364400 103 ntBASIC-3.55□□□□□ -2.98
RPS28P62857 Y_RNA.277-201ENST00000364754 102 ntBASIC-3.55□□□□□ -2.98
RPS28P62857 RNU6-887P-201ENST00000410660 100 ntBASIC-3.55□□□□□ -2.98
RPS28P62857 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.55□□□□□ -2.98
RPS28P62857 RNU6-176P-201ENST00000517196 105 ntBASIC-3.55□□□□□ -2.98
RPS28P62857 RNU6-537P-201ENST00000517277 103 ntBASIC-3.55□□□□□ -2.98
RPS28P62857 Y_RNA.158-201ENST00000363651 101 ntBASIC-3.56□□□□□ -2.98
RPS28P62857 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.56□□□□□ -2.98
RPS28P62857 RNU6-713P-201ENST00000384761 107 ntBASIC-3.57□□□□□ -2.98
RPS28P62857 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.57□□□□□ -2.98
RPS28P62857 RNU6-854P-201ENST00000364036 107 ntBASIC-3.58□□□□□ -2.98
RPS28P62857 RNU6-915P-201ENST00000364943 103 ntBASIC-3.58□□□□□ -2.98
RPS28P62857 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.58□□□□□ -2.98
RPS28P62857 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.58□□□□□ -2.98
RPS28P62857 MIR1302-6-201ENST00000408466 90 ntBASIC-3.58□□□□□ -2.98
RPS28P62857 SNORD116-10-201ENST00000363791 102 ntBASIC-3.59□□□□□ -2.98
RPS28P62857 RNU6-303P-201ENST00000517091 106 ntBASIC-3.59□□□□□ -2.98
RPS28P62857 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3.59□□□□□ -2.98
RPS28P62857 AP000770.2-201ENST00000623694 100 ntBASIC-3.59□□□□□ -2.98
RPS28P62857 RNU6-460P-201ENST00000391158 108 ntBASIC-3.6□□□□□ -2.99
RPS28P62857 AC074348.1-201ENST00000426503 132 ntBASIC-3.6□□□□□ -2.99
RPS28P62857 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.6□□□□□ -2.99
RPS28P62857 MIR4679-2-201ENST00000578358 77 ntBASIC-3.6□□□□□ -2.99
RPS28P62857 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.6□□□□□ -2.99
RPS28P62857 MIR7110-201ENST00000612638 86 ntBASIC-3.6□□□□□ -2.99
RPS28P62857 SNORD113.1-201ENST00000363280 73 ntBASIC-3.61□□□□□ -2.99
RPS28P62857 RNU4-40P-201ENST00000364351 143 ntBASIC-3.61□□□□□ -2.99
RPS28P62857 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.61□□□□□ -2.99
RPS28P62857 RNU7-197P-201ENST00000458836 62 ntBASIC-3.61□□□□□ -2.99
RPS28P62857 RNU6-239P-201ENST00000390990 99 ntBASIC-3.62□□□□□ -2.99
RPS28P62857 RNU7-121P-201ENST00000516604 62 ntBASIC-3.62□□□□□ -2.99
RPS28P62857 U6.104-201ENST00000637979 90 ntBASIC-3.62□□□□□ -2.99
RPS28P62857 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.63□□□□□ -2.99
RPS28P62857 MIR5009-201ENST00000578736 100 ntBASIC-3.63□□□□□ -2.99
RPS28P62857 RNU6-624P-201ENST00000363411 107 ntBASIC-3.64□□□□□ -2.99
RPS28P62857 Y_RNA.626-201ENST00000411288 95 ntBASIC-3.64□□□□□ -2.99
RPS28P62857 AL158147.1-201ENST00000443970 75 ntBASIC-3.64□□□□□ -2.99
RPS28P62857 RNU6-789P-201ENST00000517105 102 ntBASIC-3.64□□□□□ -2.99
RPS28P62857 RNU6-988P-201ENST00000519081 107 ntBASIC-3.64□□□□□ -2.99
RPS28P62857 Y_RNA.58-201ENST00000362807 102 ntBASIC-3.66□□□□□ -3
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms