Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MIR6888-201ENST00000621977 67 ntBASIC-1.11□□□□□ -2.59
NEK3P51956 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.12□□□□□ -2.59
NEK3P51956 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.12□□□□□ -2.59
NEK3P51956 SNORD57-201ENST00000448188 72 ntBASIC-1.12□□□□□ -2.59
NEK3P51956 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.13□□□□□ -2.59
NEK3P51956 AL445584.3-201ENST00000617173 78 ntBASIC-1.13□□□□□ -2.59
NEK3P51956 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.13□□□□□ -2.59
NEK3P51956 MIR1297-201ENST00000637311 77 ntBASIC-1.13□□□□□ -2.59
NEK3P51956 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.14□□□□□ -2.59
NEK3P51956 MIR8485-201ENST00000401372 91 ntBASIC-1.14□□□□□ -2.59
NEK3P51956 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.14□□□□□ -2.59
NEK3P51956 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.14□□□□□ -2.59
NEK3P51956 MIR3675-201ENST00000583661 73 ntBASIC-1.14□□□□□ -2.59
NEK3P51956 RNU6-153P-201ENST00000364422 104 ntBASIC-1.15□□□□□ -2.59
NEK3P51956 RNU6-10P-201ENST00000384036 107 ntBASIC-1.16□□□□□ -2.6
NEK3P51956 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.16□□□□□ -2.6
NEK3P51956 AC074348.1-201ENST00000426503 132 ntBASIC-1.16□□□□□ -2.6
NEK3P51956 AL021921.1-201ENST00000442774 93 ntBASIC-1.16□□□□□ -2.6
NEK3P51956 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.16□□□□□ -2.6
NEK3P51956 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.16□□□□□ -2.6
NEK3P51956 IGLL4P-201ENST00000614590 133 ntBASIC-1.16□□□□□ -2.6
NEK3P51956 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.17□□□□□ -2.6
NEK3P51956 SNORD63.1-201ENST00000516178 80 ntBASIC-1.17□□□□□ -2.6
NEK3P51956 RNU6-807P-201ENST00000516805 107 ntBASIC-1.17□□□□□ -2.6
NEK3P51956 RNA5SP266-201ENST00000410273 108 ntBASIC-1.18□□□□□ -2.6
NEK3P51956 RNY1P1-201ENST00000364372 112 ntBASIC-1.19□□□□□ -2.6
NEK3P51956 RNA5SP331-201ENST00000364986 107 ntBASIC-1.19□□□□□ -2.6
NEK3P51956 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.19□□□□□ -2.6
NEK3P51956 MIR3115-201ENST00000577915 68 ntBASIC-1.19□□□□□ -2.6
NEK3P51956 MIR6818-201ENST00000621576 65 ntBASIC-1.19□□□□□ -2.6
NEK3P51956 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.19□□□□□ -2.6
NEK3P51956 RNU6-478P-201ENST00000363904 110 ntBASIC-1.2□□□□□ -2.6
NEK3P51956 SNORD115-22-201ENST00000364456 82 ntBASIC-1.21□□□□□ -2.6
NEK3P51956 RNU6-49P-201ENST00000384256 107 ntBASIC-1.21□□□□□ -2.6
NEK3P51956 RNU6-656P-201ENST00000516785 107 ntBASIC-1.21□□□□□ -2.6
NEK3P51956 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.21□□□□□ -2.6
NEK3P51956 RNA5SP26-201ENST00000362406 119 ntBASIC-1.22□□□□□ -2.6
NEK3P51956 RNU6-315P-201ENST00000362666 107 ntBASIC-1.22□□□□□ -2.6
NEK3P51956 SNORA8.1-201ENST00000384250 140 ntBASIC-1.22□□□□□ -2.6
NEK3P51956 MIR29B1-201ENST00000385015 81 ntBASIC-1.22□□□□□ -2.6
NEK3P51956 RNU6-924P-201ENST00000362926 108 ntBASIC-1.23□□□□□ -2.61
NEK3P51956 RNA5SP192-201ENST00000364404 120 ntBASIC-1.23□□□□□ -2.61
NEK3P51956 MIR889-201ENST00000401280 79 ntBASIC-1.23□□□□□ -2.61
NEK3P51956 RNU6-706P-201ENST00000517229 104 ntBASIC-1.23□□□□□ -2.61
NEK3P51956 SNORA26.4-201ENST00000391188 123 ntBASIC-1.24□□□□□ -2.61
NEK3P51956 RNU6-518P-201ENST00000516056 96 ntBASIC-1.24□□□□□ -2.61
NEK3P51956 SNORD115-33-201ENST00000363723 82 ntBASIC-1.25□□□□□ -2.61
NEK3P51956 MIR587-201ENST00000384845 96 ntBASIC-1.25□□□□□ -2.61
NEK3P51956 MIR5588-201ENST00000581890 63 ntBASIC-1.25□□□□□ -2.61
NEK3P51956 RNU6-645P-201ENST00000364649 106 ntBASIC-1.26□□□□□ -2.61
NEK3P51956 MIR519A2-201ENST00000384990 87 ntBASIC-1.26□□□□□ -2.61
NEK3P51956 MIR527-201ENST00000385244 85 ntBASIC-1.26□□□□□ -2.61
NEK3P51956 RNY4P30-201ENST00000410216 95 ntBASIC-1.26□□□□□ -2.61
NEK3P51956 MIR3165-201ENST00000579874 75 ntBASIC-1.26□□□□□ -2.61
NEK3P51956 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.27□□□□□ -2.61
NEK3P51956 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.27□□□□□ -2.61
NEK3P51956 AP002795.1-201ENST00000534879 84 ntBASIC-1.27□□□□□ -2.61
NEK3P51956 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.28□□□□□ -2.61
NEK3P51956 RNU6-979P-201ENST00000383896 107 ntBASIC-1.28□□□□□ -2.61
NEK3P51956 AC138207.3-201ENST00000585289 166 ntBASIC-1.28□□□□□ -2.61
NEK3P51956 AC091912.2-201ENST00000624798 167 ntBASIC-1.28□□□□□ -2.61
NEK3P51956 RNU6-330P-201ENST00000363015 107 ntBASIC-1.29□□□□□ -2.62
NEK3P51956 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.29□□□□□ -2.62
NEK3P51956 RNA5SP461-201ENST00000516451 104 ntBASIC-1.29□□□□□ -2.62
NEK3P51956 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.29□□□□□ -2.62
NEK3P51956 MIR6502-201ENST00000617296 76 ntBASIC-1.29□□□□□ -2.62
NEK3P51956 MIR6874-201ENST00000635894 71 ntBASIC-1.29□□□□□ -2.62
NEK3P51956 RNU6-576P-201ENST00000390854 102 ntBASIC-1.3□□□□□ -2.62
NEK3P51956 U2.7-201ENST00000619197 100 ntBASIC-1.3□□□□□ -2.62
NEK3P51956 HLA-S-202ENST00000425174 53 ntBASIC-1.31□□□□□ -2.62
NEK3P51956 RNU7-171P-201ENST00000459581 62 ntBASIC-1.31□□□□□ -2.62
NEK3P51956 MIR5591-201ENST00000578248 65 ntBASIC-1.31□□□□□ -2.62
NEK3P51956 MIR548AG1-201ENST00000579932 66 ntBASIC-1.31□□□□□ -2.62
NEK3P51956 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.31□□□□□ -2.62
NEK3P51956 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.32□□□□□ -2.62
NEK3P51956 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.32□□□□□ -2.62
NEK3P51956 MIR4520-1-201ENST00000582609 70 ntBASIC-1.32□□□□□ -2.62
NEK3P51956 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.33□□□□□ -2.62
NEK3P51956 SNORD45.1-201ENST00000363181 77 ntBASIC-1.33□□□□□ -2.62
NEK3P51956 SNORD19-201ENST00000391191 68 ntBASIC-1.33□□□□□ -2.62
NEK3P51956 MIR8053-201ENST00000613344 75 ntBASIC-1.33□□□□□ -2.62
NEK3P51956 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.34□□□□□ -2.62
NEK3P51956 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.34□□□□□ -2.62
NEK3P51956 MIR507-201ENST00000385234 94 ntBASIC-1.34□□□□□ -2.62
NEK3P51956 RNU6-604P-201ENST00000390917 100 ntBASIC-1.34□□□□□ -2.62
NEK3P51956 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.34□□□□□ -2.62
NEK3P51956 SNX3P1X-201ENST00000414887 175 ntBASIC-1.34□□□□□ -2.62
NEK3P51956 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.35□□□□□ -2.63
NEK3P51956 RNU6-164P-201ENST00000364604 103 ntBASIC-1.35□□□□□ -2.63
NEK3P51956 MIR450A2-201ENST00000385022 100 ntBASIC-1.35□□□□□ -2.63
NEK3P51956 RNU6-226P-201ENST00000363778 107 ntBASIC-1.36□□□□□ -2.63
NEK3P51956 RNU6-242P-201ENST00000384359 107 ntBASIC-1.36□□□□□ -2.63
NEK3P51956 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
NEK3P51956 AL353691.2-201ENST00000443795 59 ntBASIC-1.36□□□□□ -2.63
NEK3P51956 MIR4770-201ENST00000579149 58 ntBASIC-1.36□□□□□ -2.63
NEK3P51956 RNU6-294P-201ENST00000364999 102 ntBASIC-1.38□□□□□ -2.63
NEK3P51956 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.38□□□□□ -2.63
NEK3P51956 RPL35AP4-201ENST00000412007 102 ntBASIC-1.38□□□□□ -2.63
NEK3P51956 AC090616.4-201ENST00000448026 115 ntBASIC-1.38□□□□□ -2.63
NEK3P51956 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms