Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC093729.1-201ENST00000513074 128 ntBASIC-1.35□□□□□ -2.63
HOXD13P35453 SNORA40.13-201ENST00000516379 120 ntBASIC-1.35□□□□□ -2.63
HOXD13P35453 RNU6-656P-201ENST00000516785 107 ntBASIC-1.35□□□□□ -2.63
HOXD13P35453 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.35□□□□□ -2.63
HOXD13P35453 SNORD116-22-201ENST00000384430 92 ntBASIC-1.36□□□□□ -2.63
HOXD13P35453 RNU7-88P-201ENST00000458752 63 ntBASIC-1.36□□□□□ -2.63
HOXD13P35453 RNA5SP180-201ENST00000516181 101 ntBASIC-1.36□□□□□ -2.63
HOXD13P35453 RNU6-164P-201ENST00000364604 103 ntBASIC-1.37□□□□□ -2.63
HOXD13P35453 RNU6-645P-201ENST00000364649 106 ntBASIC-1.37□□□□□ -2.63
HOXD13P35453 RNU6-807P-201ENST00000516805 107 ntBASIC-1.37□□□□□ -2.63
HOXD13P35453 RNU6-540P-201ENST00000384622 101 ntBASIC-1.38□□□□□ -2.63
HOXD13P35453 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.38□□□□□ -2.63
HOXD13P35453 U2.7-201ENST00000619197 100 ntBASIC-1.38□□□□□ -2.63
HOXD13P35453 MIR1246-201ENST00000636535 73 ntBASIC-1.38□□□□□ -2.63
HOXD13P35453 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.39□□□□□ -2.63
HOXD13P35453 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.39□□□□□ -2.63
HOXD13P35453 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.39□□□□□ -2.63
HOXD13P35453 MIR507-201ENST00000385234 94 ntBASIC-1.39□□□□□ -2.63
HOXD13P35453 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.39□□□□□ -2.63
HOXD13P35453 RNU6-732P-201ENST00000516033 103 ntBASIC-1.39□□□□□ -2.63
HOXD13P35453 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.4□□□□□ -2.63
HOXD13P35453 RNA5SP331-201ENST00000364986 107 ntBASIC-1.4□□□□□ -2.63
HOXD13P35453 U7.5-201ENST00000517224 61 ntBASIC-1.4□□□□□ -2.63
HOXD13P35453 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.41□□□□□ -2.64
HOXD13P35453 RNY4P18-201ENST00000391107 89 ntBASIC-1.41□□□□□ -2.64
HOXD13P35453 AP002795.1-201ENST00000534879 84 ntBASIC-1.41□□□□□ -2.64
HOXD13P35453 MIR3675-201ENST00000583661 73 ntBASIC-1.41□□□□□ -2.64
HOXD13P35453 AP001318.4-201ENST00000616637 121 ntBASIC-1.41□□□□□ -2.64
HOXD13P35453 MALAT1.1-201ENST00000618249 95 ntBASIC-1.41□□□□□ -2.64
HOXD13P35453 RNU6-624P-201ENST00000363411 107 ntBASIC-1.42□□□□□ -2.64
HOXD13P35453 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.42□□□□□ -2.64
HOXD13P35453 SNORA8.1-201ENST00000384250 140 ntBASIC-1.42□□□□□ -2.64
HOXD13P35453 MIR548H1-201ENST00000408610 102 ntBASIC-1.42□□□□□ -2.64
HOXD13P35453 RNU6-402P-201ENST00000410678 103 ntBASIC-1.42□□□□□ -2.64
HOXD13P35453 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.42□□□□□ -2.64
HOXD13P35453 MIR4490-201ENST00000582647 84 ntBASIC-1.42□□□□□ -2.64
HOXD13P35453 AL627230.5-201ENST00000619807 58 ntBASIC-1.42□□□□□ -2.64
HOXD13P35453 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.43□□□□□ -2.64
HOXD13P35453 RNU6-303P-201ENST00000517091 106 ntBASIC-1.43□□□□□ -2.64
HOXD13P35453 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.44□□□□□ -2.64
HOXD13P35453 MIR487B-201ENST00000385021 84 ntBASIC-1.44□□□□□ -2.64
HOXD13P35453 MIR548Q-201ENST00000408404 100 ntBASIC-1.44□□□□□ -2.64
HOXD13P35453 MIR548AG1-201ENST00000579932 66 ntBASIC-1.44□□□□□ -2.64
HOXD13P35453 RNU6-330P-201ENST00000363015 107 ntBASIC-1.45□□□□□ -2.64
HOXD13P35453 SNORD18.1-201ENST00000363807 70 ntBASIC-1.45□□□□□ -2.64
HOXD13P35453 SNORD113-1-201ENST00000365321 69 ntBASIC-1.45□□□□□ -2.64
HOXD13P35453 RNU6-246P-201ENST00000384702 107 ntBASIC-1.45□□□□□ -2.64
HOXD13P35453 RNU6-604P-201ENST00000390917 100 ntBASIC-1.45□□□□□ -2.64
HOXD13P35453 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.45□□□□□ -2.64
HOXD13P35453 RNU6-267P-201ENST00000516714 103 ntBASIC-1.45□□□□□ -2.64
HOXD13P35453 MIR548BB-201ENST00000626714 66 ntBASIC-1.45□□□□□ -2.64
HOXD13P35453 MIR5683-201ENST00000636514 76 ntBASIC-1.45□□□□□ -2.64
HOXD13P35453 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.46□□□□□ -2.64
HOXD13P35453 RNU6-219P-201ENST00000364728 107 ntBASIC-1.46□□□□□ -2.64
HOXD13P35453 RNU6-686P-201ENST00000364839 107 ntBASIC-1.46□□□□□ -2.64
HOXD13P35453 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.46□□□□□ -2.64
HOXD13P35453 RNU6-557P-201ENST00000516842 110 ntBASIC-1.46□□□□□ -2.64
HOXD13P35453 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.47□□□□□ -2.64
HOXD13P35453 AC090616.4-201ENST00000448026 115 ntBASIC-1.47□□□□□ -2.64
HOXD13P35453 RNU6-983P-201ENST00000516004 103 ntBASIC-1.47□□□□□ -2.64
HOXD13P35453 RNU6-168P-201ENST00000516189 101 ntBASIC-1.47□□□□□ -2.64
HOXD13P35453 SNORD45.1-201ENST00000363181 77 ntBASIC-1.48□□□□□ -2.65
HOXD13P35453 RNU6-755P-201ENST00000364400 103 ntBASIC-1.48□□□□□ -2.65
HOXD13P35453 SNORD19-201ENST00000391191 68 ntBASIC-1.48□□□□□ -2.65
HOXD13P35453 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.48□□□□□ -2.65
HOXD13P35453 RNU6-228P-201ENST00000362700 106 ntBASIC-1.49□□□□□ -2.65
HOXD13P35453 MIR1285-2-201ENST00000408311 88 ntBASIC-1.49□□□□□ -2.65
HOXD13P35453 RPL35AP4-201ENST00000412007 102 ntBASIC-1.49□□□□□ -2.65
HOXD13P35453 SNX3P1X-201ENST00000414887 175 ntBASIC-1.49□□□□□ -2.65
HOXD13P35453 AL606753.1-201ENST00000427435 87 ntBASIC-1.49□□□□□ -2.65
HOXD13P35453 MIR429-201ENST00000362106 83 ntBASIC-1.5□□□□□ -2.65
HOXD13P35453 RNU6-32P-201ENST00000383948 107 ntBASIC-1.5□□□□□ -2.65
HOXD13P35453 RNU6-458P-201ENST00000384179 107 ntBASIC-1.5□□□□□ -2.65
HOXD13P35453 RNU6-13P-201ENST00000384248 107 ntBASIC-1.5□□□□□ -2.65
HOXD13P35453 RNU6-12P-201ENST00000384604 107 ntBASIC-1.5□□□□□ -2.65
HOXD13P35453 RNU6-41P-201ENST00000384741 107 ntBASIC-1.5□□□□□ -2.65
HOXD13P35453 RNU6-129P-201ENST00000391022 107 ntBASIC-1.5□□□□□ -2.65
HOXD13P35453 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.5□□□□□ -2.65
HOXD13P35453 U6.58-201ENST00000613107 107 ntBASIC-1.5□□□□□ -2.65
HOXD13P35453 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.51□□□□□ -2.65
HOXD13P35453 RNU6-380P-201ENST00000410207 107 ntBASIC-1.51□□□□□ -2.65
HOXD13P35453 RNU6-982P-201ENST00000516216 102 ntBASIC-1.51□□□□□ -2.65
HOXD13P35453 MIR4484-201ENST00000582855 83 ntBASIC-1.51□□□□□ -2.65
HOXD13P35453 RNU6-400P-201ENST00000391173 106 ntBASIC-1.52□□□□□ -2.65
HOXD13P35453 AL603908.1-201ENST00000406098 201 ntBASIC-1.52□□□□□ -2.65
HOXD13P35453 AC108019.1-201ENST00000512540 175 ntBASIC-1.52□□□□□ -2.65
HOXD13P35453 RNU7-174P-201ENST00000516248 59 ntBASIC-1.52□□□□□ -2.65
HOXD13P35453 RNU6-789P-201ENST00000517105 102 ntBASIC-1.53□□□□□ -2.65
HOXD13P35453 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.54□□□□□ -2.66
HOXD13P35453 RNU6-79P-201ENST00000362511 107 ntBASIC-1.54□□□□□ -2.66
HOXD13P35453 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.54□□□□□ -2.66
HOXD13P35453 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.54□□□□□ -2.66
HOXD13P35453 RNU6-478P-201ENST00000363904 110 ntBASIC-1.54□□□□□ -2.66
HOXD13P35453 RNU6-497P-201ENST00000365316 104 ntBASIC-1.54□□□□□ -2.66
HOXD13P35453 AC074348.1-201ENST00000426503 132 ntBASIC-1.54□□□□□ -2.66
HOXD13P35453 MTND4LP1-201ENST00000446263 157 ntBASIC-1.54□□□□□ -2.66
HOXD13P35453 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.55□□□□□ -2.66
HOXD13P35453 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.55□□□□□ -2.66
HOXD13P35453 MIR548V-201ENST00000584165 80 ntBASIC-1.55□□□□□ -2.66
HOXD13P35453 MIR1297-201ENST00000637311 77 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms