Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 SNORD64-201ENST00000386683 67 ntBASIC-0.48□□□□□ -2.49
COL5A3P25940 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.48□□□□□ -2.49
COL5A3P25940 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.48□□□□□ -2.49
COL5A3P25940 RNU7-154P-201ENST00000516194 62 ntBASIC-0.48□□□□□ -2.49
COL5A3P25940 RNU6-219P-201ENST00000364728 107 ntBASIC-0.49□□□□□ -2.49
COL5A3P25940 RNU6-752P-201ENST00000516376 102 ntBASIC-0.49□□□□□ -2.49
COL5A3P25940 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.49□□□□□ -2.49
COL5A3P25940 U7.5-201ENST00000517224 61 ntBASIC-0.49□□□□□ -2.49
COL5A3P25940 MIR4464-201ENST00000580818 92 ntBASIC-0.49□□□□□ -2.49
COL5A3P25940 RNU6-215P-201ENST00000365169 102 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 RNA5SP89-201ENST00000410300 108 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 RNU6-406P-201ENST00000516470 107 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 MIR548BB-201ENST00000626714 66 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 RNU6-32P-201ENST00000383948 107 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 RNU6-13P-201ENST00000384248 107 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 SNORA8.1-201ENST00000384250 140 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 RNU6-12P-201ENST00000384604 107 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 RNU6-41P-201ENST00000384741 107 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.5□□□□□ -2.49
COL5A3P25940 SNORD45.1-201ENST00000363181 77 ntBASIC-0.51□□□□□ -2.49
COL5A3P25940 RNA5SP192-201ENST00000364404 120 ntBASIC-0.51□□□□□ -2.49
COL5A3P25940 RNU6-431P-201ENST00000383874 107 ntBASIC-0.51□□□□□ -2.49
COL5A3P25940 SNORD83B-201ENST00000386745 93 ntBASIC-0.51□□□□□ -2.49
COL5A3P25940 RNU6-303P-201ENST00000517091 106 ntBASIC-0.51□□□□□ -2.49
COL5A3P25940 IGLL4P-201ENST00000614590 133 ntBASIC-0.51□□□□□ -2.49
COL5A3P25940 RNU6-119P-201ENST00000364882 107 ntBASIC-0.52□□□□□ -2.49
COL5A3P25940 MIR488-201ENST00000365739 83 ntBASIC-0.52□□□□□ -2.49
COL5A3P25940 RNU6-675P-201ENST00000384236 104 ntBASIC-0.52□□□□□ -2.49
COL5A3P25940 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
COL5A3P25940 RNU6-844P-201ENST00000517175 102 ntBASIC-0.52□□□□□ -2.49
COL5A3P25940 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.52□□□□□ -2.49
COL5A3P25940 SNORA26.4-201ENST00000391188 123 ntBASIC-0.52□□□□□ -2.49
COL5A3P25940 RNU6-640P-201ENST00000363693 105 ntBASIC-0.53□□□□□ -2.49
COL5A3P25940 RNU6-478P-201ENST00000363904 110 ntBASIC-0.53□□□□□ -2.49
COL5A3P25940 RNU6-497P-201ENST00000365316 104 ntBASIC-0.53□□□□□ -2.49
COL5A3P25940 RNU6-979P-201ENST00000383896 107 ntBASIC-0.53□□□□□ -2.49
COL5A3P25940 AL021921.1-201ENST00000442774 93 ntBASIC-0.53□□□□□ -2.49
COL5A3P25940 MIR4324-201ENST00000584846 72 ntBASIC-0.53□□□□□ -2.49
COL5A3P25940 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
COL5A3P25940 RNU6-402P-201ENST00000410678 103 ntBASIC-0.54□□□□□ -2.5
COL5A3P25940 SCARNA17-201ENST00000516183 144 ntBASIC-0.54□□□□□ -2.5
COL5A3P25940 RNU6-557P-201ENST00000516842 110 ntBASIC-0.54□□□□□ -2.5
COL5A3P25940 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.54□□□□□ -2.5
COL5A3P25940 RNU6-330P-201ENST00000363015 107 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 RNA5SP215-201ENST00000363440 122 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 RNU6-49P-201ENST00000384256 107 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 AC074348.1-201ENST00000426503 132 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 RNU7-88P-201ENST00000458752 63 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 RNU6-982P-201ENST00000516216 102 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 MIR8053-201ENST00000613344 75 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 U2.7-201ENST00000619197 100 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 MIR382-201ENST00000637119 76 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 RNU6-645P-201ENST00000364649 106 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 RNU6-168P-201ENST00000516189 101 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 U2.22-201ENST00000636441 106 ntBASIC-0.55□□□□□ -2.5
COL5A3P25940 SNORD115-33-201ENST00000363723 82 ntBASIC-0.56□□□□□ -2.5
COL5A3P25940 RNU6-686P-201ENST00000364839 107 ntBASIC-0.56□□□□□ -2.5
COL5A3P25940 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.56□□□□□ -2.5
COL5A3P25940 MIR630-201ENST00000384957 97 ntBASIC-0.56□□□□□ -2.5
COL5A3P25940 MIR450A2-201ENST00000385022 100 ntBASIC-0.56□□□□□ -2.5
COL5A3P25940 RNU6-129P-201ENST00000391022 107 ntBASIC-0.56□□□□□ -2.5
COL5A3P25940 RNU6-380P-201ENST00000410207 107 ntBASIC-0.56□□□□□ -2.5
COL5A3P25940 SNORD63.1-201ENST00000516178 80 ntBASIC-0.56□□□□□ -2.5
COL5A3P25940 SNORD113.1-201ENST00000363280 73 ntBASIC-0.57□□□□□ -2.5
COL5A3P25940 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.57□□□□□ -2.5
COL5A3P25940 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.57□□□□□ -2.5
COL5A3P25940 SCARNA18B-201ENST00000458806 135 ntBASIC-0.57□□□□□ -2.5
COL5A3P25940 RNU6-518P-201ENST00000516056 96 ntBASIC-0.57□□□□□ -2.5
COL5A3P25940 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.57□□□□□ -2.5
COL5A3P25940 MIR4490-201ENST00000582647 84 ntBASIC-0.57□□□□□ -2.5
COL5A3P25940 MIR664A-201ENST00000626086 82 ntBASIC-0.57□□□□□ -2.5
COL5A3P25940 RNU7-174P-201ENST00000516248 59 ntBASIC-0.58□□□□□ -2.5
COL5A3P25940 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.58□□□□□ -2.5
COL5A3P25940 RNU6-698P-201ENST00000363523 107 ntBASIC-0.58□□□□□ -2.5
COL5A3P25940 RNU6-34P-201ENST00000364874 107 ntBASIC-0.58□□□□□ -2.5
COL5A3P25940 MIR147A-201ENST00000385079 72 ntBASIC-0.58□□□□□ -2.5
COL5A3P25940 AL500527.2-201ENST00000454105 95 ntBASIC-0.58□□□□□ -2.5
COL5A3P25940 RNU7-171P-201ENST00000459581 62 ntBASIC-0.58□□□□□ -2.5
COL5A3P25940 RNU6-807P-201ENST00000516805 107 ntBASIC-0.58□□□□□ -2.5
COL5A3P25940 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.59□□□□□ -2.5
COL5A3P25940 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.59□□□□□ -2.5
COL5A3P25940 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.59□□□□□ -2.5
COL5A3P25940 RNU6-294P-201ENST00000364999 102 ntBASIC-0.59□□□□□ -2.5
COL5A3P25940 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.59□□□□□ -2.5
COL5A3P25940 SNORD113-2-201ENST00000391082 72 ntBASIC-0.59□□□□□ -2.5
COL5A3P25940 SNORD19-201ENST00000391191 68 ntBASIC-0.59□□□□□ -2.5
COL5A3P25940 RNU6-70P-201ENST00000516438 60 ntBASIC-0.59□□□□□ -2.5
COL5A3P25940 AP002795.1-201ENST00000534879 84 ntBASIC-0.59□□□□□ -2.5
COL5A3P25940 MIR548AG1-201ENST00000579932 66 ntBASIC-0.59□□□□□ -2.5
COL5A3P25940 RNU6-246P-201ENST00000384702 107 ntBASIC-0.6□□□□□ -2.51
COL5A3P25940 RNU6-587P-201ENST00000391282 106 ntBASIC-0.6□□□□□ -2.51
COL5A3P25940 MTND4LP1-201ENST00000446263 157 ntBASIC-0.6□□□□□ -2.51
COL5A3P25940 snoU83B.1-201ENST00000517136 88 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms