Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC108676.2-201ENST00000605225 163 ntBASIC-0.07□□□□□ -2.42
CD48P09326 RNU6-900P-201ENST00000384498 102 ntBASIC-0.08□□□□□ -2.42
CD48P09326 MIR519A2-201ENST00000384990 87 ntBASIC-0.08□□□□□ -2.42
CD48P09326 MIR214-201ENST00000385214 110 ntBASIC-0.08□□□□□ -2.42
CD48P09326 RNU7-174P-201ENST00000516248 59 ntBASIC-0.08□□□□□ -2.42
CD48P09326 MIR8053-201ENST00000613344 75 ntBASIC-0.08□□□□□ -2.42
CD48P09326 RNU6-973P-201ENST00000364690 107 ntBASIC-0.09□□□□□ -2.42
CD48P09326 AC096531.1-201ENST00000419107 107 ntBASIC-0.09□□□□□ -2.42
CD48P09326 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.09□□□□□ -2.42
CD48P09326 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.09□□□□□ -2.42
CD48P09326 U4.4-201ENST00000620626 117 ntBASIC-0.09□□□□□ -2.42
CD48P09326 SNORA18.1-201ENST00000363418 128 ntBASIC-0.1□□□□□ -2.43
CD48P09326 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.1□□□□□ -2.43
CD48P09326 AC114755.3-201ENST00000481111 251 ntBASIC-0.1□□□□□ -2.43
CD48P09326 RNU6-518P-201ENST00000516056 96 ntBASIC-0.1□□□□□ -2.43
CD48P09326 MIR4645-201ENST00000583158 77 ntBASIC-0.1□□□□□ -2.43
CD48P09326 AL391099.1-201ENST00000624635 187 ntBASIC-0.1□□□□□ -2.43
CD48P09326 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.11□□□□□ -2.43
CD48P09326 RNA5SP67-201ENST00000516422 131 ntBASIC-0.11□□□□□ -2.43
CD48P09326 MIR4280-201ENST00000582178 76 ntBASIC-0.11□□□□□ -2.43
CD48P09326 AL353803.5-201ENST00000599815 141 ntBASIC-0.11□□□□□ -2.43
CD48P09326 MIR101-1-201ENST00000362265 75 ntBASIC-0.12□□□□□ -2.43
CD48P09326 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.12□□□□□ -2.43
CD48P09326 SNORD114-11-201ENST00000363738 75 ntBASIC-0.12□□□□□ -2.43
CD48P09326 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
CD48P09326 MIR4432-201ENST00000581823 84 ntBASIC-0.12□□□□□ -2.43
CD48P09326 MIR6888-201ENST00000621977 67 ntBASIC-0.12□□□□□ -2.43
CD48P09326 MIR4662A-201ENST00000637499 67 ntBASIC-0.12□□□□□ -2.43
CD48P09326 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.13□□□□□ -2.43
CD48P09326 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.13□□□□□ -2.43
CD48P09326 RNU6-663P-201ENST00000391105 106 ntBASIC-0.13□□□□□ -2.43
CD48P09326 AL445193.1-201ENST00000441183 141 ntBASIC-0.13□□□□□ -2.43
CD48P09326 RNA5SP169-201ENST00000517268 117 ntBASIC-0.13□□□□□ -2.43
CD48P09326 SNORD95.1-201ENST00000364099 68 ntBASIC-0.14□□□□□ -2.43
CD48P09326 RNU6-668P-201ENST00000364180 107 ntBASIC-0.14□□□□□ -2.43
CD48P09326 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
CD48P09326 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.14□□□□□ -2.43
CD48P09326 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.14□□□□□ -2.43
CD48P09326 RNU6-895P-201ENST00000384125 103 ntBASIC-0.14□□□□□ -2.43
CD48P09326 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.14□□□□□ -2.43
CD48P09326 MIR548C-201ENST00000384815 97 ntBASIC-0.14□□□□□ -2.43
CD48P09326 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.14□□□□□ -2.43
CD48P09326 SNORD114-12-201ENST00000365400 75 ntBASIC-0.15□□□□□ -2.43
CD48P09326 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.15□□□□□ -2.43
CD48P09326 AL021921.1-201ENST00000442774 93 ntBASIC-0.15□□□□□ -2.43
CD48P09326 RNU7-154P-201ENST00000516194 62 ntBASIC-0.15□□□□□ -2.43
CD48P09326 SNORD38.3-201ENST00000516599 73 ntBASIC-0.15□□□□□ -2.43
CD48P09326 MIR548V-201ENST00000584165 80 ntBASIC-0.15□□□□□ -2.43
CD48P09326 MIR409-201ENST00000362237 79 ntBASIC-0.16□□□□□ -2.44
CD48P09326 SNORD114-28-201ENST00000363610 72 ntBASIC-0.16□□□□□ -2.44
CD48P09326 MIR630-201ENST00000384957 97 ntBASIC-0.16□□□□□ -2.44
CD48P09326 RPS29P8-201ENST00000445109 171 ntBASIC-0.16□□□□□ -2.44
CD48P09326 MTND4LP1-201ENST00000446263 157 ntBASIC-0.16□□□□□ -2.44
CD48P09326 SNORD4A-201ENST00000459174 72 ntBASIC-0.16□□□□□ -2.44
CD48P09326 AC005520.4-201ENST00000604337 90 ntBASIC-0.16□□□□□ -2.44
CD48P09326 MIR6851-201ENST00000617060 67 ntBASIC-0.16□□□□□ -2.44
CD48P09326 AL445584.3-201ENST00000617173 78 ntBASIC-0.16□□□□□ -2.44
CD48P09326 U6.111-201ENST00000636093 83 ntBASIC-0.16□□□□□ -2.44
CD48P09326 RNU6-698P-201ENST00000363523 107 ntBASIC-0.17□□□□□ -2.44
CD48P09326 RNU6-34P-201ENST00000364874 107 ntBASIC-0.17□□□□□ -2.44
CD48P09326 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.17□□□□□ -2.44
CD48P09326 RNU6-246P-201ENST00000384702 107 ntBASIC-0.17□□□□□ -2.44
CD48P09326 MIR3666-201ENST00000607845 111 ntBASIC-0.17□□□□□ -2.44
CD48P09326 MIR517B-201ENST00000385102 67 ntBASIC-0.18□□□□□ -2.44
CD48P09326 RNA5SP300-201ENST00000391197 107 ntBASIC-0.18□□□□□ -2.44
CD48P09326 RNU6-630P-201ENST00000391258 106 ntBASIC-0.18□□□□□ -2.44
CD48P09326 MIR6854-201ENST00000614935 69 ntBASIC-0.18□□□□□ -2.44
CD48P09326 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.19□□□□□ -2.44
CD48P09326 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.19□□□□□ -2.44
CD48P09326 SNORA41B-201ENST00000384785 128 ntBASIC-0.19□□□□□ -2.44
CD48P09326 SNORD30.1-201ENST00000391309 70 ntBASIC-0.19□□□□□ -2.44
CD48P09326 RNA5SP470-201ENST00000516463 106 ntBASIC-0.19□□□□□ -2.44
CD48P09326 RNA5SP66-201ENST00000517178 101 ntBASIC-0.19□□□□□ -2.44
CD48P09326 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.19□□□□□ -2.44
CD48P09326 MIR4788-201ENST00000639104 80 ntBASIC-0.19□□□□□ -2.44
CD48P09326 RNA5SP215-201ENST00000363440 122 ntBASIC-0.2□□□□□ -2.44
CD48P09326 RNU6-649P-201ENST00000384463 107 ntBASIC-0.2□□□□□ -2.44
CD48P09326 RNU6-901P-201ENST00000384593 106 ntBASIC-0.2□□□□□ -2.44
CD48P09326 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
CD48P09326 SNORD113-2-201ENST00000391082 72 ntBASIC-0.2□□□□□ -2.44
CD48P09326 RNA5SP451-201ENST00000410588 110 ntBASIC-0.2□□□□□ -2.44
CD48P09326 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.2□□□□□ -2.44
CD48P09326 RNU6-871P-201ENST00000516122 100 ntBASIC-0.2□□□□□ -2.44
CD48P09326 MIR4263-201ENST00000584745 83 ntBASIC-0.2□□□□□ -2.44
CD48P09326 snoR1.1-201ENST00000628177 80 ntBASIC-0.2□□□□□ -2.44
CD48P09326 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.21□□□□□ -2.44
CD48P09326 SNORA25.4-201ENST00000363666 124 ntBASIC-0.21□□□□□ -2.44
CD48P09326 RNA5SP266-201ENST00000410273 108 ntBASIC-0.21□□□□□ -2.44
CD48P09326 AC114801.3-201ENST00000510231 177 ntBASIC-0.21□□□□□ -2.44
CD48P09326 RNU6-539P-201ENST00000516665 103 ntBASIC-0.21□□□□□ -2.44
CD48P09326 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.21□□□□□ -2.44
CD48P09326 RNU6-800P-201ENST00000384473 103 ntBASIC-0.22□□□□□ -2.44
CD48P09326 MIR224-201ENST00000384889 81 ntBASIC-0.23□□□□□ -2.45
CD48P09326 MIR8064-201ENST00000612863 90 ntBASIC-0.23□□□□□ -2.45
CD48P09326 AC093726.3-201ENST00000637588 150 ntBASIC-0.23□□□□□ -2.45
CD48P09326 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.24□□□□□ -2.45
CD48P09326 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.24□□□□□ -2.45
CD48P09326 MIR124-2-201ENST00000385081 109 ntBASIC-0.24□□□□□ -2.45
CD48P09326 RNU6-542P-201ENST00000516405 103 ntBASIC-0.24□□□□□ -2.45
CD48P09326 SNORA62.4-201ENST00000365504 151 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms