Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MIR1236-201ENST00000408340 102 ntBASIC-5.34□□□□□ -3.26
HMGN1P05114 RNU6-982P-201ENST00000516216 102 ntBASIC-5.34□□□□□ -3.26
HMGN1P05114 Y_RNA.70-201ENST00000362886 110 ntBASIC-5.35□□□□□ -3.27
HMGN1P05114 Y_RNA.277-201ENST00000364754 102 ntBASIC-5.35□□□□□ -3.27
HMGN1P05114 RNU6-345P-201ENST00000517001 107 ntBASIC-5.35□□□□□ -3.27
HMGN1P05114 RNU4-11P-201ENST00000365287 132 ntBASIC-5.36□□□□□ -3.27
HMGN1P05114 SNORD116-4-201ENST00000384733 96 ntBASIC-5.36□□□□□ -3.27
HMGN1P05114 Y_RNA.194-201ENST00000363985 102 ntBASIC-5.37□□□□□ -3.27
HMGN1P05114 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-5.37□□□□□ -3.27
HMGN1P05114 RNU6-1047P-201ENST00000364418 107 ntBASIC-5.38□□□□□ -3.27
HMGN1P05114 RNU6-876P-201ENST00000391295 104 ntBASIC-5.38□□□□□ -3.27
HMGN1P05114 RNU6-781P-201ENST00000516377 101 ntBASIC-5.38□□□□□ -3.27
HMGN1P05114 RNU7-121P-201ENST00000516604 62 ntBASIC-5.38□□□□□ -3.27
HMGN1P05114 Y_RNA.435-201ENST00000384095 112 ntBASIC-5.4□□□□□ -3.27
HMGN1P05114 Y_RNA.668-201ENST00000516233 93 ntBASIC-5.4□□□□□ -3.27
HMGN1P05114 AC113195.1-201ENST00000579952 141 ntBASIC-5.4□□□□□ -3.27
HMGN1P05114 RNU6-668P-201ENST00000364180 107 ntBASIC-5.41□□□□□ -3.28
HMGN1P05114 Y_RNA.626-201ENST00000411288 95 ntBASIC-5.41□□□□□ -3.28
HMGN1P05114 RNU6-867P-201ENST00000364956 107 ntBASIC-5.42□□□□□ -3.28
HMGN1P05114 RNU6-639P-201ENST00000384074 107 ntBASIC-5.42□□□□□ -3.28
HMGN1P05114 Y_RNA.516-201ENST00000384541 124 ntBASIC-5.42□□□□□ -3.28
HMGN1P05114 MT-TL1-201ENST00000386347 75 ntBASIC-5.42□□□□□ -3.28
HMGN1P05114 SNORD77.2-201ENST00000391045 68 ntBASIC-5.42□□□□□ -3.28
HMGN1P05114 MIR4777-201ENST00000583710 86 ntBASIC-5.42□□□□□ -3.28
HMGN1P05114 RNU6-604P-201ENST00000390917 100 ntBASIC-5.43□□□□□ -3.28
HMGN1P05114 Y_RNA.579-201ENST00000390939 94 ntBASIC-5.43□□□□□ -3.28
HMGN1P05114 Y_RNA.663-201ENST00000516043 101 ntBASIC-5.43□□□□□ -3.28
HMGN1P05114 SNORD115-37-201ENST00000363768 82 ntBASIC-5.44□□□□□ -3.28
HMGN1P05114 Y_RNA.688-201ENST00000516565 95 ntBASIC-5.44□□□□□ -3.28
HMGN1P05114 Y_RNA.69-201ENST00000362885 109 ntBASIC-5.45□□□□□ -3.28
HMGN1P05114 RNA5SP173-201ENST00000364857 136 ntBASIC-5.45□□□□□ -3.28
HMGN1P05114 Y_RNA.320-201ENST00000365144 102 ntBASIC-5.45□□□□□ -3.28
HMGN1P05114 SNORD58A-201ENST00000383875 65 ntBASIC-5.45□□□□□ -3.28
HMGN1P05114 RNA5SP215-201ENST00000363440 122 ntBASIC-5.46□□□□□ -3.28
HMGN1P05114 RNU6-460P-201ENST00000391158 108 ntBASIC-5.46□□□□□ -3.28
HMGN1P05114 RNU7-160P-201ENST00000516660 62 ntBASIC-5.46□□□□□ -3.28
HMGN1P05114 U6.104-201ENST00000637979 90 ntBASIC-5.46□□□□□ -3.28
HMGN1P05114 Y_RNA.47-201ENST00000362697 108 ntBASIC-5.47□□□□□ -3.29
HMGN1P05114 RNU6-972P-201ENST00000391208 107 ntBASIC-5.47□□□□□ -3.29
HMGN1P05114 RNU6-554P-201ENST00000410466 106 ntBASIC-5.47□□□□□ -3.29
HMGN1P05114 Y_RNA.705-201ENST00000516862 110 ntBASIC-5.47□□□□□ -3.29
HMGN1P05114 Y_RNA.29-201ENST00000362570 113 ntBASIC-5.48□□□□□ -3.29
HMGN1P05114 RNU6-713P-201ENST00000384761 107 ntBASIC-5.48□□□□□ -3.29
HMGN1P05114 Y_RNA.778-201ENST00000620203 90 ntBASIC-5.48□□□□□ -3.29
HMGN1P05114 RNU6-918P-201ENST00000391219 106 ntBASIC-5.49□□□□□ -3.29
HMGN1P05114 AL158147.1-201ENST00000443970 75 ntBASIC-5.49□□□□□ -3.29
HMGN1P05114 RNU6-988P-201ENST00000519081 107 ntBASIC-5.49□□□□□ -3.29
HMGN1P05114 MIR4679-2-201ENST00000578358 77 ntBASIC-5.49□□□□□ -3.29
HMGN1P05114 RNU6-129P-201ENST00000391022 107 ntBASIC-5.5□□□□□ -3.29
HMGN1P05114 Y_RNA.264-201ENST00000364665 102 ntBASIC-5.51□□□□□ -3.29
HMGN1P05114 RNU6-795P-201ENST00000516323 103 ntBASIC-5.51□□□□□ -3.29
HMGN1P05114 MIR3675-201ENST00000583661 73 ntBASIC-5.51□□□□□ -3.29
HMGN1P05114 MIR4426-201ENST00000640330 63 ntBASIC-5.51□□□□□ -3.29
HMGN1P05114 Y_RNA.58-201ENST00000362807 102 ntBASIC-5.52□□□□□ -3.29
HMGN1P05114 RNU6-590P-201ENST00000365039 107 ntBASIC-5.52□□□□□ -3.29
HMGN1P05114 Y_RNA.604-201ENST00000410574 102 ntBASIC-5.52□□□□□ -3.29
HMGN1P05114 AL035470.1-201ENST00000622571 220 ntBASIC-5.52□□□□□ -3.29
HMGN1P05114 RNU6-737P-201ENST00000365370 107 ntBASIC-5.53□□□□□ -3.29
HMGN1P05114 RNU7-197P-201ENST00000458836 62 ntBASIC-5.53□□□□□ -3.29
HMGN1P05114 RNU7-153P-201ENST00000516455 62 ntBASIC-5.53□□□□□ -3.29
HMGN1P05114 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-5.53□□□□□ -3.29
HMGN1P05114 MTND2P23-201ENST00000422990 651 ntBASIC-5.54□□□□□ -3.3
HMGN1P05114 RNU6-300P-201ENST00000459080 104 ntBASIC-5.54□□□□□ -3.3
HMGN1P05114 RNU6-887P-201ENST00000410660 100 ntBASIC-5.55□□□□□ -3.3
HMGN1P05114 Y_RNA.609-201ENST00000410669 89 ntBASIC-5.55□□□□□ -3.3
HMGN1P05114 MTND4LP1-201ENST00000446263 157 ntBASIC-5.55□□□□□ -3.3
HMGN1P05114 RNU6-330P-201ENST00000363015 107 ntBASIC-5.56□□□□□ -3.3
HMGN1P05114 RNU6-176P-201ENST00000517196 105 ntBASIC-5.56□□□□□ -3.3
HMGN1P05114 Y_RNA.96-201ENST00000363092 109 ntBASIC-5.58□□□□□ -3.3
HMGN1P05114 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-5.58□□□□□ -3.3
HMGN1P05114 SNORD45.1-201ENST00000363181 77 ntBASIC-5.6□□□□□ -3.31
HMGN1P05114 SNORD116-10-201ENST00000363791 102 ntBASIC-5.6□□□□□ -3.31
HMGN1P05114 RNU6-1219P-201ENST00000516143 112 ntBASIC-5.6□□□□□ -3.31
HMGN1P05114 RNU6-1108P-201ENST00000516308 104 ntBASIC-5.6□□□□□ -3.31
HMGN1P05114 SNORA8.1-201ENST00000384250 140 ntBASIC-5.61□□□□□ -3.31
HMGN1P05114 RNU6-537P-201ENST00000517277 103 ntBASIC-5.61□□□□□ -3.31
HMGN1P05114 MIR5009-201ENST00000578736 100 ntBASIC-5.61□□□□□ -3.31
HMGN1P05114 RNU6-1169P-201ENST00000363537 103 ntBASIC-5.62□□□□□ -3.31
HMGN1P05114 Y_RNA.158-201ENST00000363651 101 ntBASIC-5.62□□□□□ -3.31
HMGN1P05114 SNORD58C-201ENST00000365223 64 ntBASIC-5.63□□□□□ -3.31
HMGN1P05114 RNU6-1061P-201ENST00000516530 99 ntBASIC-5.63□□□□□ -3.31
HMGN1P05114 AC139792.2-201ENST00000624218 587 ntBASIC-5.63□□□□□ -3.31
HMGN1P05114 RNU6-1296P-201ENST00000383879 107 ntBASIC-5.64□□□□□ -3.31
HMGN1P05114 Y_RNA.649-201ENST00000459077 103 ntBASIC-5.64□□□□□ -3.31
HMGN1P05114 AP001340.1-201ENST00000624405 217 ntBASIC-5.64□□□□□ -3.31
HMGN1P05114 RNU6-182P-201ENST00000516970 105 ntBASIC-5.65□□□□□ -3.31
HMGN1P05114 Y_RNA.318-201ENST00000365131 97 ntBASIC-5.66□□□□□ -3.32
HMGN1P05114 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-5.67□□□□□ -3.32
HMGN1P05114 RNU6-755P-201ENST00000364400 103 ntBASIC-5.68□□□□□ -3.32
HMGN1P05114 RNU6-1206P-201ENST00000516339 103 ntBASIC-5.7□□□□□ -3.32
HMGN1P05114 RNY3P1-201ENST00000365085 102 ntBASIC-5.71□□□□□ -3.32
HMGN1P05114 RNU6-1020P-201ENST00000363684 107 ntBASIC-5.72□□□□□ -3.33
HMGN1P05114 U7.2-201ENST00000607576 63 ntBASIC-5.73□□□□□ -3.33
HMGN1P05114 RNU6-810P-201ENST00000364001 107 ntBASIC-5.74□□□□□ -3.33
HMGN1P05114 SNORD115-45-201ENST00000391078 81 ntBASIC-5.74□□□□□ -3.33
HMGN1P05114 SNORD42.2-201ENST00000365570 69 ntBASIC-5.75□□□□□ -3.33
HMGN1P05114 MIR7110-201ENST00000612638 86 ntBASIC-5.76□□□□□ -3.33
HMGN1P05114 SNORD45.2-201ENST00000363552 72 ntBASIC-5.78□□□□□ -3.33
HMGN1P05114 RNU6-303P-201ENST00000517091 106 ntBASIC-5.78□□□□□ -3.33
HMGN1P05114 MIR4680-201ENST00000580906 66 ntBASIC-5.78□□□□□ -3.33
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms