Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MALAT1.1-201ENST00000618249 95 ntBASIC-1.35□□□□□ -2.63
HLA-DQB1P01920 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.36□□□□□ -2.63
HLA-DQB1P01920 RNU4-61P-201ENST00000411243 107 ntBASIC-1.36□□□□□ -2.63
HLA-DQB1P01920 MIR548BB-201ENST00000626714 66 ntBASIC-1.36□□□□□ -2.63
HLA-DQB1P01920 MIR507-201ENST00000385234 94 ntBASIC-1.37□□□□□ -2.63
HLA-DQB1P01920 RNU6-576P-201ENST00000390854 102 ntBASIC-1.37□□□□□ -2.63
HLA-DQB1P01920 RNY4P18-201ENST00000391107 89 ntBASIC-1.37□□□□□ -2.63
HLA-DQB1P01920 MIR5683-201ENST00000636514 76 ntBASIC-1.37□□□□□ -2.63
HLA-DQB1P01920 RNU6-478P-201ENST00000363904 110 ntBASIC-1.38□□□□□ -2.63
HLA-DQB1P01920 RNU6-686P-201ENST00000364839 107 ntBASIC-1.38□□□□□ -2.63
HLA-DQB1P01920 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.38□□□□□ -2.63
HLA-DQB1P01920 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.38□□□□□ -2.63
HLA-DQB1P01920 RNU6-402P-201ENST00000410678 103 ntBASIC-1.38□□□□□ -2.63
HLA-DQB1P01920 SNORA40.13-201ENST00000516379 120 ntBASIC-1.38□□□□□ -2.63
HLA-DQB1P01920 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.39□□□□□ -2.63
HLA-DQB1P01920 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.39□□□□□ -2.63
HLA-DQB1P01920 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.39□□□□□ -2.63
HLA-DQB1P01920 SNORA8.1-201ENST00000384250 140 ntBASIC-1.39□□□□□ -2.63
HLA-DQB1P01920 MIR527-201ENST00000385244 85 ntBASIC-1.39□□□□□ -2.63
HLA-DQB1P01920 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.4□□□□□ -2.63
HLA-DQB1P01920 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.4□□□□□ -2.63
HLA-DQB1P01920 RNU6-587P-201ENST00000391282 106 ntBASIC-1.4□□□□□ -2.63
HLA-DQB1P01920 RNU6-982P-201ENST00000516216 102 ntBASIC-1.4□□□□□ -2.63
HLA-DQB1P01920 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.4□□□□□ -2.63
HLA-DQB1P01920 MIR4490-201ENST00000582647 84 ntBASIC-1.4□□□□□ -2.63
HLA-DQB1P01920 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.4□□□□□ -2.63
HLA-DQB1P01920 RNU6-755P-201ENST00000364400 103 ntBASIC-1.41□□□□□ -2.64
HLA-DQB1P01920 RNU6-164P-201ENST00000364604 103 ntBASIC-1.41□□□□□ -2.64
HLA-DQB1P01920 RNU6-458P-201ENST00000384179 107 ntBASIC-1.41□□□□□ -2.64
HLA-DQB1P01920 MIR548C-201ENST00000384815 97 ntBASIC-1.41□□□□□ -2.64
HLA-DQB1P01920 RNU6-604P-201ENST00000390917 100 ntBASIC-1.41□□□□□ -2.64
HLA-DQB1P01920 MIR548M-201ENST00000408260 86 ntBASIC-1.41□□□□□ -2.64
HLA-DQB1P01920 RNU6-313P-201ENST00000516317 112 ntBASIC-1.41□□□□□ -2.64
HLA-DQB1P01920 U6.58-201ENST00000613107 107 ntBASIC-1.41□□□□□ -2.64
HLA-DQB1P01920 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.42□□□□□ -2.64
HLA-DQB1P01920 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.42□□□□□ -2.64
HLA-DQB1P01920 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.43□□□□□ -2.64
HLA-DQB1P01920 MIR488-201ENST00000365739 83 ntBASIC-1.43□□□□□ -2.64
HLA-DQB1P01920 RNU6-675P-201ENST00000384236 104 ntBASIC-1.43□□□□□ -2.64
HLA-DQB1P01920 AC091912.2-201ENST00000624798 167 ntBASIC-1.43□□□□□ -2.64
HLA-DQB1P01920 SNORD45.1-201ENST00000363181 77 ntBASIC-1.44□□□□□ -2.64
HLA-DQB1P01920 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.44□□□□□ -2.64
HLA-DQB1P01920 RNU6-129P-201ENST00000391022 107 ntBASIC-1.44□□□□□ -2.64
HLA-DQB1P01920 MIR889-201ENST00000401280 79 ntBASIC-1.44□□□□□ -2.64
HLA-DQB1P01920 HLA-S-202ENST00000425174 53 ntBASIC-1.44□□□□□ -2.64
HLA-DQB1P01920 AC138207.3-201ENST00000585289 166 ntBASIC-1.44□□□□□ -2.64
HLA-DQB1P01920 U4.4-201ENST00000620626 117 ntBASIC-1.44□□□□□ -2.64
HLA-DQB1P01920 RNU6-640P-201ENST00000363693 105 ntBASIC-1.45□□□□□ -2.64
HLA-DQB1P01920 RNU6-226P-201ENST00000363778 107 ntBASIC-1.45□□□□□ -2.64
HLA-DQB1P01920 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.45□□□□□ -2.64
HLA-DQB1P01920 RNU6-696P-201ENST00000390834 107 ntBASIC-1.45□□□□□ -2.64
HLA-DQB1P01920 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.45□□□□□ -2.64
HLA-DQB1P01920 AC090616.4-201ENST00000448026 115 ntBASIC-1.45□□□□□ -2.64
HLA-DQB1P01920 MIR3910-1-201ENST00000580936 111 ntBASIC-1.45□□□□□ -2.64
HLA-DQB1P01920 RNU6-698P-201ENST00000363523 107 ntBASIC-1.46□□□□□ -2.64
HLA-DQB1P01920 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.46□□□□□ -2.64
HLA-DQB1P01920 RNU6-34P-201ENST00000364874 107 ntBASIC-1.46□□□□□ -2.64
HLA-DQB1P01920 SNORD113-1-201ENST00000365321 69 ntBASIC-1.46□□□□□ -2.64
HLA-DQB1P01920 RPL35AP4-201ENST00000412007 102 ntBASIC-1.46□□□□□ -2.64
HLA-DQB1P01920 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.46□□□□□ -2.64
HLA-DQB1P01920 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.47□□□□□ -2.64
HLA-DQB1P01920 MIR409-201ENST00000362237 79 ntBASIC-1.48□□□□□ -2.65
HLA-DQB1P01920 MIR548Q-201ENST00000408404 100 ntBASIC-1.48□□□□□ -2.65
HLA-DQB1P01920 RNA5SP266-201ENST00000410273 108 ntBASIC-1.48□□□□□ -2.65
HLA-DQB1P01920 MIR5591-201ENST00000578248 65 ntBASIC-1.48□□□□□ -2.65
HLA-DQB1P01920 MIR548V-201ENST00000584165 80 ntBASIC-1.48□□□□□ -2.65
HLA-DQB1P01920 MIR1297-201ENST00000637311 77 ntBASIC-1.48□□□□□ -2.65
HLA-DQB1P01920 AC006160.2-201ENST00000637708 154 ntBASIC-1.48□□□□□ -2.65
HLA-DQB1P01920 RNA5SP180-201ENST00000516181 101 ntBASIC-1.49□□□□□ -2.65
HLA-DQB1P01920 MIR6502-201ENST00000617296 76 ntBASIC-1.49□□□□□ -2.65
HLA-DQB1P01920 MIR6874-201ENST00000635894 71 ntBASIC-1.49□□□□□ -2.65
HLA-DQB1P01920 RNU6-598P-201ENST00000364017 105 ntBASIC-1.5□□□□□ -2.65
HLA-DQB1P01920 RNU6-844P-201ENST00000517175 102 ntBASIC-1.5□□□□□ -2.65
HLA-DQB1P01920 MIR4484-201ENST00000582855 83 ntBASIC-1.5□□□□□ -2.65
HLA-DQB1P01920 RNU6-32P-201ENST00000383948 107 ntBASIC-1.51□□□□□ -2.65
HLA-DQB1P01920 RNU6-13P-201ENST00000384248 107 ntBASIC-1.51□□□□□ -2.65
HLA-DQB1P01920 RNU6-12P-201ENST00000384604 107 ntBASIC-1.51□□□□□ -2.65
HLA-DQB1P01920 RNU6-41P-201ENST00000384741 107 ntBASIC-1.51□□□□□ -2.65
HLA-DQB1P01920 RNU6-168P-201ENST00000516189 101 ntBASIC-1.51□□□□□ -2.65
HLA-DQB1P01920 MIR4520-1-201ENST00000582609 70 ntBASIC-1.51□□□□□ -2.65
HLA-DQB1P01920 MIR429-201ENST00000362106 83 ntBASIC-1.52□□□□□ -2.65
HLA-DQB1P01920 RNA5SP215-201ENST00000363440 122 ntBASIC-1.52□□□□□ -2.65
HLA-DQB1P01920 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.52□□□□□ -2.65
HLA-DQB1P01920 RNU6-608P-201ENST00000383927 104 ntBASIC-1.53□□□□□ -2.65
HLA-DQB1P01920 RNU6-147P-201ENST00000383983 107 ntBASIC-1.53□□□□□ -2.65
HLA-DQB1P01920 RNU6-630P-201ENST00000391258 106 ntBASIC-1.53□□□□□ -2.65
HLA-DQB1P01920 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.53□□□□□ -2.65
HLA-DQB1P01920 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.53□□□□□ -2.65
HLA-DQB1P01920 MTND4LP1-201ENST00000446263 157 ntBASIC-1.53□□□□□ -2.65
HLA-DQB1P01920 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.54□□□□□ -2.66
HLA-DQB1P01920 SNORD113.1-201ENST00000363280 73 ntBASIC-1.54□□□□□ -2.66
HLA-DQB1P01920 MIR520D-201ENST00000385002 87 ntBASIC-1.54□□□□□ -2.66
HLA-DQB1P01920 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
HLA-DQB1P01920 MIR8053-201ENST00000613344 75 ntBASIC-1.54□□□□□ -2.66
HLA-DQB1P01920 MIR630-201ENST00000384957 97 ntBASIC-1.55□□□□□ -2.66
HLA-DQB1P01920 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.55□□□□□ -2.66
HLA-DQB1P01920 RNU6-315P-201ENST00000362666 107 ntBASIC-1.56□□□□□ -2.66
HLA-DQB1P01920 SNORA63.4-201ENST00000362763 126 ntBASIC-1.56□□□□□ -2.66
HLA-DQB1P01920 SNORD113-2-201ENST00000391082 72 ntBASIC-1.56□□□□□ -2.66
HLA-DQB1P01920 U2.18-201ENST00000622185 84 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 294.3 ms