Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MIR519C-201ENST00000385053 87 ntBASIC-1.92□□□□□ -2.72
NPHP4O75161 RNU6-478P-201ENST00000363904 110 ntBASIC-1.94□□□□□ -2.72
NPHP4O75161 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.94□□□□□ -2.72
NPHP4O75161 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.94□□□□□ -2.72
NPHP4O75161 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.95□□□□□ -2.72
NPHP4O75161 MIR6502-201ENST00000617296 76 ntBASIC-1.95□□□□□ -2.72
NPHP4O75161 RNU6-540P-201ENST00000384622 101 ntBASIC-1.96□□□□□ -2.72
NPHP4O75161 RNY4-201ENST00000516507 96 ntBASIC-1.96□□□□□ -2.72
NPHP4O75161 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.97□□□□□ -2.72
NPHP4O75161 RNU6-458P-201ENST00000384179 107 ntBASIC-1.97□□□□□ -2.72
NPHP4O75161 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.97□□□□□ -2.72
NPHP4O75161 U6.58-201ENST00000613107 107 ntBASIC-1.97□□□□□ -2.72
NPHP4O75161 RNY1P5-201ENST00000383890 115 ntBASIC-1.98□□□□□ -2.73
NPHP4O75161 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.98□□□□□ -2.73
NPHP4O75161 SNORD116-14-201ENST00000383894 92 ntBASIC-1.99□□□□□ -2.73
NPHP4O75161 SNORD116-17-201ENST00000383929 92 ntBASIC-1.99□□□□□ -2.73
NPHP4O75161 SNORD116-15-201ENST00000384445 92 ntBASIC-1.99□□□□□ -2.73
NPHP4O75161 SNORD116-19-201ENST00000384729 92 ntBASIC-1.99□□□□□ -2.73
NPHP4O75161 RNU6-554P-201ENST00000410466 106 ntBASIC-1.99□□□□□ -2.73
NPHP4O75161 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.99□□□□□ -2.73
NPHP4O75161 RNU6-168P-201ENST00000516189 101 ntBASIC-1.99□□□□□ -2.73
NPHP4O75161 RNU6-330P-201ENST00000363015 107 ntBASIC-2□□□□□ -2.73
NPHP4O75161 Y_RNA.264-201ENST00000364665 102 ntBASIC-2□□□□□ -2.73
NPHP4O75161 SNORA19-201ENST00000384737 128 ntBASIC-2□□□□□ -2.73
NPHP4O75161 RNU6-106P-201ENST00000384405 107 ntBASIC-2□□□□□ -2.73
NPHP4O75161 SNORD54-201ENST00000459159 67 ntBASIC-2□□□□□ -2.73
NPHP4O75161 RNU6-983P-201ENST00000516004 103 ntBASIC-2□□□□□ -2.73
NPHP4O75161 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.01□□□□□ -2.73
NPHP4O75161 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.01□□□□□ -2.73
NPHP4O75161 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.01□□□□□ -2.73
NPHP4O75161 RNU7-174P-201ENST00000516248 59 ntBASIC-2.01□□□□□ -2.73
NPHP4O75161 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.01□□□□□ -2.73
NPHP4O75161 SNORD115-37-201ENST00000363768 82 ntBASIC-2.02□□□□□ -2.73
NPHP4O75161 AC018880.2-201ENST00000414265 201 ntBASIC-2.02□□□□□ -2.73
NPHP4O75161 AC099654.10-201ENST00000640395 161 ntBASIC-2.02□□□□□ -2.73
NPHP4O75161 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.03□□□□□ -2.73
NPHP4O75161 RNU6-696P-201ENST00000390834 107 ntBASIC-2.03□□□□□ -2.73
NPHP4O75161 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.03□□□□□ -2.73
NPHP4O75161 RNU6-982P-201ENST00000516216 102 ntBASIC-2.04□□□□□ -2.74
NPHP4O75161 MIR3675-201ENST00000583661 73 ntBASIC-2.04□□□□□ -2.74
NPHP4O75161 RNU6-633P-201ENST00000362612 103 ntBASIC-2.05□□□□□ -2.74
NPHP4O75161 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.05□□□□□ -2.74
NPHP4O75161 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.05□□□□□ -2.74
NPHP4O75161 RNU6-630P-201ENST00000391258 106 ntBASIC-2.05□□□□□ -2.74
NPHP4O75161 MIR548H1-201ENST00000408610 102 ntBASIC-2.05□□□□□ -2.74
NPHP4O75161 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.05□□□□□ -2.74
NPHP4O75161 RNU6-624P-201ENST00000363411 107 ntBASIC-2.06□□□□□ -2.74
NPHP4O75161 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.06□□□□□ -2.74
NPHP4O75161 MIR4668-201ENST00000582284 70 ntBASIC-2.06□□□□□ -2.74
NPHP4O75161 RNU6-604P-201ENST00000390917 100 ntBASIC-2.08□□□□□ -2.74
NPHP4O75161 AC093729.1-201ENST00000513074 128 ntBASIC-2.08□□□□□ -2.74
NPHP4O75161 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.08□□□□□ -2.74
NPHP4O75161 SNORD18.1-201ENST00000363807 70 ntBASIC-2.08□□□□□ -2.74
NPHP4O75161 RNU6-598P-201ENST00000364017 105 ntBASIC-2.08□□□□□ -2.74
NPHP4O75161 RNU6-608P-201ENST00000383927 104 ntBASIC-2.08□□□□□ -2.74
NPHP4O75161 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.08□□□□□ -2.74
NPHP4O75161 RNA5SP86-201ENST00000390869 98 ntBASIC-2.08□□□□□ -2.74
NPHP4O75161 RNU6-587P-201ENST00000391282 106 ntBASIC-2.08□□□□□ -2.74
NPHP4O75161 SNORA8.1-201ENST00000384250 140 ntBASIC-2.09□□□□□ -2.74
NPHP4O75161 MIR520D-201ENST00000385002 87 ntBASIC-2.09□□□□□ -2.74
NPHP4O75161 MTATP8P2-201ENST00000435212 202 ntBASIC-2.09□□□□□ -2.74
NPHP4O75161 SNORD45.1-201ENST00000363181 77 ntBASIC-2.1□□□□□ -2.75
NPHP4O75161 RNU6-303P-201ENST00000517091 106 ntBASIC-2.11□□□□□ -2.75
NPHP4O75161 U4.4-201ENST00000620626 117 ntBASIC-2.11□□□□□ -2.75
NPHP4O75161 MIR548V-201ENST00000584165 80 ntBASIC-2.12□□□□□ -2.75
NPHP4O75161 AC090425.1-201ENST00000610007 140 ntBASIC-2.12□□□□□ -2.75
NPHP4O75161 U2.18-201ENST00000622185 84 ntBASIC-2.12□□□□□ -2.75
NPHP4O75161 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.12□□□□□ -2.75
NPHP4O75161 MIR429-201ENST00000362106 83 ntBASIC-2.13□□□□□ -2.75
NPHP4O75161 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.13□□□□□ -2.75
NPHP4O75161 RNU6-766P-201ENST00000362478 107 ntBASIC-2.14□□□□□ -2.75
NPHP4O75161 RNU6-79P-201ENST00000362511 107 ntBASIC-2.14□□□□□ -2.75
NPHP4O75161 RNA5SP93-201ENST00000362525 114 ntBASIC-2.14□□□□□ -2.75
NPHP4O75161 RNU6-698P-201ENST00000363523 107 ntBASIC-2.14□□□□□ -2.75
NPHP4O75161 RNU6-34P-201ENST00000364874 107 ntBASIC-2.14□□□□□ -2.75
NPHP4O75161 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.15□□□□□ -2.75
NPHP4O75161 RNU6-400P-201ENST00000391173 106 ntBASIC-2.15□□□□□ -2.75
NPHP4O75161 RNU6-267P-201ENST00000516714 103 ntBASIC-2.15□□□□□ -2.75
NPHP4O75161 RNU6-704P-201ENST00000364162 103 ntBASIC-2.16□□□□□ -2.75
NPHP4O75161 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.16□□□□□ -2.75
NPHP4O75161 MIR630-201ENST00000384957 97 ntBASIC-2.17□□□□□ -2.76
NPHP4O75161 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.17□□□□□ -2.76
NPHP4O75161 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.17□□□□□ -2.76
NPHP4O75161 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.17□□□□□ -2.76
NPHP4O75161 AC074348.1-201ENST00000426503 132 ntBASIC-2.17□□□□□ -2.76
NPHP4O75161 RNU6-557P-201ENST00000516842 110 ntBASIC-2.17□□□□□ -2.76
NPHP4O75161 MIR3133-201ENST00000583157 78 ntBASIC-2.17□□□□□ -2.76
NPHP4O75161 RNU6-686P-201ENST00000364839 107 ntBASIC-2.18□□□□□ -2.76
NPHP4O75161 SNORD116-22-201ENST00000384430 92 ntBASIC-2.18□□□□□ -2.76
NPHP4O75161 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.18□□□□□ -2.76
NPHP4O75161 MIR4484-201ENST00000582855 83 ntBASIC-2.18□□□□□ -2.76
NPHP4O75161 RNU6-219P-201ENST00000364728 107 ntBASIC-2.19□□□□□ -2.76
NPHP4O75161 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.19□□□□□ -2.76
NPHP4O75161 RNU6-402P-201ENST00000410678 103 ntBASIC-2.19□□□□□ -2.76
NPHP4O75161 MIR548BB-201ENST00000626714 66 ntBASIC-2.19□□□□□ -2.76
NPHP4O75161 RNU6-228P-201ENST00000362700 106 ntBASIC-2.2□□□□□ -2.76
NPHP4O75161 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.2□□□□□ -2.76
NPHP4O75161 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.21□□□□□ -2.76
NPHP4O75161 RNU6-959P-201ENST00000384671 107 ntBASIC-2.21□□□□□ -2.76
NPHP4O75161 AL365222.1-201ENST00000614661 98 ntBASIC-2.21□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms