Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.94□□□□□ -2.72
UPK1AO00322 MIR548AG1-201ENST00000579932 66 ntBASIC-1.94□□□□□ -2.72
UPK1AO00322 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.94□□□□□ -2.72
UPK1AO00322 U7.3-201ENST00000616123 62 ntBASIC-1.94□□□□□ -2.72
UPK1AO00322 RNU6-645P-201ENST00000364649 106 ntBASIC-1.95□□□□□ -2.72
UPK1AO00322 RNU6-346P-201ENST00000516288 111 ntBASIC-1.95□□□□□ -2.72
UPK1AO00322 SNORD115-37-201ENST00000363768 82 ntBASIC-1.96□□□□□ -2.72
UPK1AO00322 RNU6-400P-201ENST00000391173 106 ntBASIC-1.96□□□□□ -2.72
UPK1AO00322 MIR429-201ENST00000362106 83 ntBASIC-1.97□□□□□ -2.72
UPK1AO00322 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.97□□□□□ -2.72
UPK1AO00322 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.97□□□□□ -2.72
UPK1AO00322 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.97□□□□□ -2.72
UPK1AO00322 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.97□□□□□ -2.72
UPK1AO00322 AC018880.2-201ENST00000414265 201 ntBASIC-1.97□□□□□ -2.72
UPK1AO00322 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.97□□□□□ -2.72
UPK1AO00322 RNU6-980P-201ENST00000516925 103 ntBASIC-1.97□□□□□ -2.72
UPK1AO00322 MIR3139-201ENST00000579145 76 ntBASIC-1.97□□□□□ -2.72
UPK1AO00322 AL627230.5-201ENST00000619807 58 ntBASIC-1.97□□□□□ -2.72
UPK1AO00322 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.97□□□□□ -2.72
UPK1AO00322 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.98□□□□□ -2.73
UPK1AO00322 RNU6-119P-201ENST00000364882 107 ntBASIC-1.98□□□□□ -2.73
UPK1AO00322 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.98□□□□□ -2.73
UPK1AO00322 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.98□□□□□ -2.73
UPK1AO00322 MIR496-201ENST00000385226 102 ntBASIC-1.98□□□□□ -2.73
UPK1AO00322 RNU6-774P-201ENST00000363238 107 ntBASIC-1.99□□□□□ -2.73
UPK1AO00322 RNY1P5-201ENST00000383890 115 ntBASIC-1.99□□□□□ -2.73
UPK1AO00322 RNU6-458P-201ENST00000384179 107 ntBASIC-1.99□□□□□ -2.73
UPK1AO00322 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.99□□□□□ -2.73
UPK1AO00322 U6.58-201ENST00000613107 107 ntBASIC-1.99□□□□□ -2.73
UPK1AO00322 RNU6-478P-201ENST00000363904 110 ntBASIC-2□□□□□ -2.73
UPK1AO00322 Y_RNA.211-201ENST00000364164 101 ntBASIC-2□□□□□ -2.73
UPK1AO00322 Y_RNA.818-201ENST00000618813 71 ntBASIC-2□□□□□ -2.73
UPK1AO00322 RNU6-79P-201ENST00000362511 107 ntBASIC-2.01□□□□□ -2.73
UPK1AO00322 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.01□□□□□ -2.73
UPK1AO00322 RNU6-907P-201ENST00000390924 102 ntBASIC-2.01□□□□□ -2.73
UPK1AO00322 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.01□□□□□ -2.73
UPK1AO00322 RNA5SP405-201ENST00000363059 114 ntBASIC-2.02□□□□□ -2.73
UPK1AO00322 SNORD116-14-201ENST00000383894 92 ntBASIC-2.02□□□□□ -2.73
UPK1AO00322 SNORD116-17-201ENST00000383929 92 ntBASIC-2.02□□□□□ -2.73
UPK1AO00322 SNORD116-15-201ENST00000384445 92 ntBASIC-2.02□□□□□ -2.73
UPK1AO00322 SNORD116-19-201ENST00000384729 92 ntBASIC-2.02□□□□□ -2.73
UPK1AO00322 RNU6-696P-201ENST00000390834 107 ntBASIC-2.02□□□□□ -2.73
UPK1AO00322 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.02□□□□□ -2.73
UPK1AO00322 RNU6-109P-201ENST00000516364 107 ntBASIC-2.02□□□□□ -2.73
UPK1AO00322 RNU6-184P-201ENST00000516514 107 ntBASIC-2.02□□□□□ -2.73
UPK1AO00322 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.03□□□□□ -2.73
UPK1AO00322 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.03□□□□□ -2.73
UPK1AO00322 MIR1207-201ENST00000408249 87 ntBASIC-2.03□□□□□ -2.73
UPK1AO00322 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.03□□□□□ -2.73
UPK1AO00322 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.04□□□□□ -2.74
UPK1AO00322 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.05□□□□□ -2.74
UPK1AO00322 RNU6-194P-201ENST00000363862 105 ntBASIC-2.05□□□□□ -2.74
UPK1AO00322 MIR3675-201ENST00000583661 73 ntBASIC-2.05□□□□□ -2.74
UPK1AO00322 MT-TM-201ENST00000387377 68 ntBASIC-2.06□□□□□ -2.74
UPK1AO00322 RNU7-174P-201ENST00000516248 59 ntBASIC-2.06□□□□□ -2.74
UPK1AO00322 RNU6-695P-201ENST00000391157 104 ntBASIC-2.07□□□□□ -2.74
UPK1AO00322 RNU4-88P-201ENST00000411220 86 ntBASIC-2.07□□□□□ -2.74
UPK1AO00322 RNU6-255P-201ENST00000516957 105 ntBASIC-2.07□□□□□ -2.74
UPK1AO00322 RNU6-554P-201ENST00000410466 106 ntBASIC-2.08□□□□□ -2.74
UPK1AO00322 MTATP8P2-201ENST00000435212 202 ntBASIC-2.08□□□□□ -2.74
UPK1AO00322 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.08□□□□□ -2.74
UPK1AO00322 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.08□□□□□ -2.74
UPK1AO00322 MIR548AM-201ENST00000584298 74 ntBASIC-2.08□□□□□ -2.74
UPK1AO00322 RNU6-633P-201ENST00000362612 103 ntBASIC-2.09□□□□□ -2.74
UPK1AO00322 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.09□□□□□ -2.74
UPK1AO00322 RNU6-630P-201ENST00000391258 106 ntBASIC-2.09□□□□□ -2.74
UPK1AO00322 MIR4723-201ENST00000585070 81 ntBASIC-2.09□□□□□ -2.74
UPK1AO00322 SNORA8.1-201ENST00000384250 140 ntBASIC-2.1□□□□□ -2.75
UPK1AO00322 RNU6-106P-201ENST00000384405 107 ntBASIC-2.1□□□□□ -2.75
UPK1AO00322 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.11□□□□□ -2.75
UPK1AO00322 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.11□□□□□ -2.75
UPK1AO00322 AC093729.1-201ENST00000513074 128 ntBASIC-2.11□□□□□ -2.75
UPK1AO00322 RNU6-303P-201ENST00000517091 106 ntBASIC-2.11□□□□□ -2.75
UPK1AO00322 MIR23C-201ENST00000579846 100 ntBASIC-2.11□□□□□ -2.75
UPK1AO00322 MIR4668-201ENST00000582284 70 ntBASIC-2.11□□□□□ -2.75
UPK1AO00322 MIR3123-201ENST00000583417 75 ntBASIC-2.11□□□□□ -2.75
UPK1AO00322 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.12□□□□□ -2.75
UPK1AO00322 RNU6-624P-201ENST00000363411 107 ntBASIC-2.12□□□□□ -2.75
UPK1AO00322 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.12□□□□□ -2.75
UPK1AO00322 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.12□□□□□ -2.75
UPK1AO00322 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.13□□□□□ -2.75
UPK1AO00322 RNU6-841P-201ENST00000383872 107 ntBASIC-2.13□□□□□ -2.75
UPK1AO00322 SNORA19-201ENST00000384737 128 ntBASIC-2.13□□□□□ -2.75
UPK1AO00322 RNU6-604P-201ENST00000390917 100 ntBASIC-2.13□□□□□ -2.75
UPK1AO00322 RNU6-587P-201ENST00000391282 106 ntBASIC-2.13□□□□□ -2.75
UPK1AO00322 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.13□□□□□ -2.75
UPK1AO00322 RNU6-698P-201ENST00000363523 107 ntBASIC-2.14□□□□□ -2.75
UPK1AO00322 RNU6-34P-201ENST00000364874 107 ntBASIC-2.14□□□□□ -2.75
UPK1AO00322 MIR2052-201ENST00000636055 55 ntBASIC-2.14□□□□□ -2.75
UPK1AO00322 RNU6-766P-201ENST00000362478 107 ntBASIC-2.15□□□□□ -2.75
UPK1AO00322 SNORD45.1-201ENST00000363181 77 ntBASIC-2.15□□□□□ -2.75
UPK1AO00322 RNU6-330P-201ENST00000363015 107 ntBASIC-2.16□□□□□ -2.76
UPK1AO00322 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.16□□□□□ -2.76
UPK1AO00322 RNU6-608P-201ENST00000383927 104 ntBASIC-2.16□□□□□ -2.76
UPK1AO00322 RNU6-982P-201ENST00000516216 102 ntBASIC-2.16□□□□□ -2.76
UPK1AO00322 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.16□□□□□ -2.76
UPK1AO00322 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.17□□□□□ -2.76
UPK1AO00322 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.17□□□□□ -2.76
UPK1AO00322 MTND4LP1-201ENST00000446263 157 ntBASIC-2.17□□□□□ -2.76
UPK1AO00322 SNORD54-201ENST00000459159 67 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 237.7 ms