Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AC108676.2-201ENST00000605225 163 ntBASIC1.75□□□□□ -2.13
CCDC61Q9Y6R9 SNORA2A-201ENST00000383885 135 ntBASIC1.74□□□□□ -2.13
CCDC61Q9Y6R9 RNU6-1267P-201ENST00000410747 107 ntBASIC1.74□□□□□ -2.13
CCDC61Q9Y6R9 snoU13.18-201ENST00000459483 104 ntBASIC1.74□□□□□ -2.13
CCDC61Q9Y6R9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC61Q9Y6R9 RNU1-93P-201ENST00000364704 169 ntBASIC1.73□□□□□ -2.13
CCDC61Q9Y6R9 AC069271.1-201ENST00000445577 156 ntBASIC1.73□□□□□ -2.13
CCDC61Q9Y6R9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CCDC61Q9Y6R9 RPS29P23-201ENST00000458635 123 ntBASIC1.72□□□□□ -2.13
CCDC61Q9Y6R9 RNU6-229P-201ENST00000516614 102 ntBASIC1.72□□□□□ -2.13
CCDC61Q9Y6R9 MIR4432-201ENST00000581823 84 ntBASIC1.72□□□□□ -2.13
CCDC61Q9Y6R9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC61Q9Y6R9 AC068338.1-201ENST00000565567 176 ntBASIC1.71□□□□□ -2.14
CCDC61Q9Y6R9 SNORD26-201ENST00000384147 75 ntBASIC1.7□□□□□ -2.14
CCDC61Q9Y6R9 AC084368.1-201ENST00000620935 65 ntBASIC1.69□□□□□ -2.14
CCDC61Q9Y6R9 SNORD57-201ENST00000448188 72 ntBASIC1.68□□□□□ -2.14
CCDC61Q9Y6R9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC61Q9Y6R9 snoR1.1-201ENST00000628177 80 ntBASIC1.68□□□□□ -2.14
CCDC61Q9Y6R9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
CCDC61Q9Y6R9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC61Q9Y6R9 RNU1-124P-201ENST00000363861 145 ntBASIC1.67□□□□□ -2.14
CCDC61Q9Y6R9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
CCDC61Q9Y6R9 MIR29B1-201ENST00000385015 81 ntBASIC1.66□□□□□ -2.14
CCDC61Q9Y6R9 MIR6767-201ENST00000637302 66 ntBASIC1.66□□□□□ -2.14
CCDC61Q9Y6R9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC61Q9Y6R9 SNORD115-23-201ENST00000364461 82 ntBASIC1.65□□□□□ -2.15
CCDC61Q9Y6R9 RNA5SP517-201ENST00000364724 117 ntBASIC1.65□□□□□ -2.15
CCDC61Q9Y6R9 SNORD63.1-201ENST00000516178 80 ntBASIC1.65□□□□□ -2.15
CCDC61Q9Y6R9 U7.5-201ENST00000517224 61 ntBASIC1.65□□□□□ -2.15
CCDC61Q9Y6R9 MIR4677-201ENST00000584153 80 ntBASIC1.65□□□□□ -2.15
CCDC61Q9Y6R9 RNU6-1008P-201ENST00000384160 104 ntBASIC1.64□□□□□ -2.15
CCDC61Q9Y6R9 RNA5SP404-201ENST00000517118 132 ntBASIC1.64□□□□□ -2.15
CCDC61Q9Y6R9 SNORD114-27-201ENST00000363766 70 ntBASIC1.62□□□□□ -2.15
CCDC61Q9Y6R9 SNORA36.2-201ENST00000384004 127 ntBASIC1.62□□□□□ -2.15
CCDC61Q9Y6R9 Y_RNA.423-201ENST00000384057 113 ntBASIC1.62□□□□□ -2.15
CCDC61Q9Y6R9 RNU7-88P-201ENST00000458752 63 ntBASIC1.62□□□□□ -2.15
CCDC61Q9Y6R9 SNORA25.18-201ENST00000607153 114 ntBASIC1.62□□□□□ -2.15
CCDC61Q9Y6R9 Y_RNA.321-201ENST00000365149 102 ntBASIC1.61□□□□□ -2.15
CCDC61Q9Y6R9 RNU6-42P-201ENST00000384165 107 ntBASIC1.61□□□□□ -2.15
CCDC61Q9Y6R9 RNU6-59P-201ENST00000384787 107 ntBASIC1.61□□□□□ -2.15
CCDC61Q9Y6R9 MIR520E-201ENST00000384867 87 ntBASIC1.61□□□□□ -2.15
CCDC61Q9Y6R9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC61Q9Y6R9 RNU6-974P-201ENST00000384099 108 ntBASIC1.6□□□□□ -2.15
CCDC61Q9Y6R9 RNA5SP220-201ENST00000516298 104 ntBASIC1.6□□□□□ -2.15
CCDC61Q9Y6R9 Y_RNA.698-201ENST00000516798 118 ntBASIC1.6□□□□□ -2.15
CCDC61Q9Y6R9 RNU6-1174P-201ENST00000517278 101 ntBASIC1.6□□□□□ -2.15
CCDC61Q9Y6R9 AC098934.3-201ENST00000430450 190 ntBASIC1.59□□□□□ -2.15
CCDC61Q9Y6R9 SNORD63.2-201ENST00000516303 64 ntBASIC1.59□□□□□ -2.15
CCDC61Q9Y6R9 AP000676.1-201ENST00000533307 52 ntBASIC1.59□□□□□ -2.15
CCDC61Q9Y6R9 AL353765.1-201ENST00000605514 183 ntBASIC1.59□□□□□ -2.15
CCDC61Q9Y6R9 SNORD118-201ENST00000363593 134 ntBASIC1.57□□□□□ -2.16
CCDC61Q9Y6R9 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
CCDC61Q9Y6R9 MIR140-201ENST00000385282 100 ntBASIC1.57□□□□□ -2.16
CCDC61Q9Y6R9 MIR501-201ENST00000390204 84 ntBASIC1.57□□□□□ -2.16
CCDC61Q9Y6R9 RNU6-530P-201ENST00000391180 107 ntBASIC1.57□□□□□ -2.16
CCDC61Q9Y6R9 MIR4295-201ENST00000585286 85 ntBASIC1.57□□□□□ -2.16
CCDC61Q9Y6R9 SNORA40.8-201ENST00000411034 126 ntBASIC1.56□□□□□ -2.16
CCDC61Q9Y6R9 SNORD71-201ENST00000411292 86 ntBASIC1.56□□□□□ -2.16
CCDC61Q9Y6R9 AC087343.1-201ENST00000477341 475 ntBASIC1.56□□□□□ -2.16
CCDC61Q9Y6R9 RNU6-848P-201ENST00000515948 107 ntBASIC1.56□□□□□ -2.16
CCDC61Q9Y6R9 RNU6-617P-201ENST00000516147 107 ntBASIC1.56□□□□□ -2.16
CCDC61Q9Y6R9 RNU6-473P-201ENST00000516164 107 ntBASIC1.56□□□□□ -2.16
CCDC61Q9Y6R9 ACA64.5-201ENST00000516207 127 ntBASIC1.56□□□□□ -2.16
CCDC61Q9Y6R9 RNU6-1232P-201ENST00000516299 86 ntBASIC1.56□□□□□ -2.16
CCDC61Q9Y6R9 RNU6-1049P-201ENST00000516414 107 ntBASIC1.56□□□□□ -2.16
CCDC61Q9Y6R9 RN7SL660P-201ENST00000614852 299 ntBASIC1.56□□□□□ -2.16
CCDC61Q9Y6R9 AC022709.1-201ENST00000615967 87 ntBASIC1.56□□□□□ -2.16
CCDC61Q9Y6R9 RNU6-1223P-201ENST00000517124 104 ntBASIC1.55□□□□□ -2.16
CCDC61Q9Y6R9 MIR26B-201ENST00000362251 77 ntBASIC1.54□□□□□ -2.16
CCDC61Q9Y6R9 Y_RNA.540-201ENST00000384638 111 ntBASIC1.54□□□□□ -2.16
CCDC61Q9Y6R9 MIR548H4-201ENST00000408689 111 ntBASIC1.54□□□□□ -2.16
CCDC61Q9Y6R9 RPS29P1-201ENST00000465274 159 ntBASIC1.54□□□□□ -2.16
CCDC61Q9Y6R9 RNU6-894P-201ENST00000517094 105 ntBASIC1.54□□□□□ -2.16
CCDC61Q9Y6R9 MTRNR2L9-201ENST00000622562 75 ntBASIC1.54□□□□□ -2.16
CCDC61Q9Y6R9 SNORA62.4-201ENST00000365504 151 ntBASIC1.53□□□□□ -2.16
CCDC61Q9Y6R9 MIR3170-201ENST00000582699 77 ntBASIC1.53□□□□□ -2.16
CCDC61Q9Y6R9 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
CCDC61Q9Y6R9 RNU6-1111P-201ENST00000391118 107 ntBASIC1.52□□□□□ -2.17
CCDC61Q9Y6R9 MIR6734-201ENST00000621166 68 ntBASIC1.52□□□□□ -2.17
CCDC61Q9Y6R9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC61Q9Y6R9 AC138207.3-201ENST00000585289 166 ntBASIC1.51□□□□□ -2.17
CCDC61Q9Y6R9 MIR6788-201ENST00000618842 66 ntBASIC1.5□□□□□ -2.17
CCDC61Q9Y6R9 MIR6888-201ENST00000621977 67 ntBASIC1.5□□□□□ -2.17
CCDC61Q9Y6R9 MIR4317-201ENST00000637586 65 ntBASIC1.5□□□□□ -2.17
CCDC61Q9Y6R9 MIR106A-201ENST00000384870 81 ntBASIC1.49□□□□□ -2.17
CCDC61Q9Y6R9 MIR760-201ENST00000390220 80 ntBASIC1.49□□□□□ -2.17
CCDC61Q9Y6R9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC61Q9Y6R9 MIR373-201ENST00000362273 69 ntBASIC1.48□□□□□ -2.17
CCDC61Q9Y6R9 MIR876-201ENST00000401147 81 ntBASIC1.48□□□□□ -2.17
CCDC61Q9Y6R9 AC104408.1-201ENST00000605241 170 ntBASIC1.48□□□□□ -2.17
CCDC61Q9Y6R9 AL445584.3-201ENST00000617173 78 ntBASIC1.48□□□□□ -2.17
CCDC61Q9Y6R9 RNU6-939P-201ENST00000384634 107 ntBASIC1.47□□□□□ -2.17
CCDC61Q9Y6R9 RNU6-1326P-201ENST00000391262 107 ntBASIC1.47□□□□□ -2.17
CCDC61Q9Y6R9 MIR548J-201ENST00000408833 112 ntBASIC1.47□□□□□ -2.17
CCDC61Q9Y6R9 RNU6-1133P-201ENST00000410963 100 ntBASIC1.47□□□□□ -2.17
CCDC61Q9Y6R9 MIR151B-201ENST00000584249 96 ntBASIC1.47□□□□□ -2.17
CCDC61Q9Y6R9 Y_RNA.613-201ENST00000410726 97 ntBASIC1.45□□□□□ -2.18
CCDC61Q9Y6R9 MIR4464-201ENST00000580818 92 ntBASIC1.45□□□□□ -2.18
CCDC61Q9Y6R9 SNORD114-21-201ENST00000606412 72 ntBASIC1.45□□□□□ -2.18
CCDC61Q9Y6R9 MIR518A1-201ENST00000385068 85 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms